RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
SKP2-204ENST00000508514 KIAA0586Q9BVV6 1533 aa31.27■■■□□ 2.6
SKP2-204ENST00000508514 CUL7Q14999 1698 aa31.24■■■□□ 2.59
SKP2-204ENST00000508514 CARMIL1Q5VZK9 1371 aa31.21■■■□□ 2.59
SKP2-204ENST00000508514 ADCY10Q96PN6 1610 aa31.09■■■□□ 2.57
SKP2-204ENST00000508514 KIF13AQ9H1H9 1805 aa31.09■■■□□ 2.57
SKP2-204ENST00000508514 NPM1P06748 294 aaKnown RBP eCLIP31.02■■■□□ 2.56
SKP2-204ENST00000508514 ABCC10Q5T3U5 1492 aa31.01■■■□□ 2.56
SKP2-204ENST00000508514 MAPKBP1O60336 1514 aa31.01■■■□□ 2.55
SKP2-204ENST00000508514 FAM69CQ0P6D2 419 aa31■■■□□ 2.55
SKP2-204ENST00000508514 PTPRGP23470 1445 aa30.98■■■□□ 2.55
SKP2-204ENST00000508514 IQGAP2Q13576 1575 aa30.92■■■□□ 2.54
SKP2-204ENST00000508514 TTBK1Q5TCY1 1321 aaPredicted RBP30.92■■■□□ 2.54
SKP2-204ENST00000508514 TNIKQ9UKE5 1360 aa30.92■■■□□ 2.54
SKP2-204ENST00000508514 DIP2BQ9P265 1576 aa30.91■■■□□ 2.54
SKP2-204ENST00000508514 CARMIL2Q6F5E8 1435 aa30.9■■■□□ 2.54
SKP2-204ENST00000508514 RAPGEF2Q9Y4G8 1499 aa30.89■■■□□ 2.54
SKP2-204ENST00000508514 DISP1Q96F81 1524 aa30.88■■■□□ 2.53
SKP2-204ENST00000508514 AEBP2Q6ZN18 517 aaPredicted RBP30.8■■■□□ 2.52
SKP2-204ENST00000508514 ABCC2Q92887 1545 aa30.79■■■□□ 2.52
SKP2-204ENST00000508514 UGGT2Q9NYU1 1516 aa30.78■■■□□ 2.52
SKP2-204ENST00000508514 UHRF1BP1LA0JNW5 1464 aa30.75■■■□□ 2.51
SKP2-204ENST00000508514 UACAQ9BZF9 1416 aa30.74■■■□□ 2.51
SKP2-204ENST00000508514 ASXL2Q76L83 1435 aa30.71■■■□□ 2.51
SKP2-204ENST00000508514 KIAA0556O60303 1618 aa30.66■■■□□ 2.5
SKP2-204ENST00000508514 PRXQ9BXM0 1461 aa30.65■■■□□ 2.5
SKP2-204ENST00000508514 TSPOAP1O95153 1857 aa30.64■■■□□ 2.5
SKP2-204ENST00000508514 PLB1Q6P1J6 1458 aa30.63■■■□□ 2.49
SKP2-204ENST00000508514 KDM5BQ9UGL1 1544 aa30.63■■■□□ 2.49
SKP2-204ENST00000508514 GLI2P10070 1586 aa30.58■■■□□ 2.49
SKP2-204ENST00000508514 KDM6BO15054 1643 aa30.57■■■□□ 2.48
SKP2-204ENST00000508514 CTTNBP2Q8WZ74 1663 aa30.55■■■□□ 2.48
SKP2-204ENST00000508514 PPRC1Q5VV67 1664 aaKnown RBP30.53■■■□□ 2.48
SKP2-204ENST00000508514 EPRSP07814 1512 aaKnown RBP30.52■■■□□ 2.48
SKP2-204ENST00000508514 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.48
SKP2-204ENST00000508514 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
SKP2-204ENST00000508514 KDM4FA0A1W2PPD8 638 aa30.43■■■□□ 2.46
SKP2-204ENST00000508514 ABCA8O94911 1581 aa30.42■■■□□ 2.46
SKP2-204ENST00000508514 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
SKP2-204ENST00000508514 COL17A1Q9UMD9 1497 aaPredicted RBP30.42■■■□□ 2.46
SKP2-204ENST00000508514 MAP3K4Q9Y6R4 1608 aa30.4■■■□□ 2.46
SKP2-204ENST00000508514 WDR7Q9Y4E6 1490 aa30.38■■■□□ 2.45
SKP2-204ENST00000508514 P3H3Q8IVL6 736 aa30.34■■■□□ 2.45
SKP2-204ENST00000508514 KCNH8Q96L42 1107 aa30.27■■■□□ 2.44
SKP2-204ENST00000508514 TEX14Q8IWB6 1497 aa30.26■■■□□ 2.44
SKP2-204ENST00000508514 ARID3CA6NKF2 412 aa30.22■■■□□ 2.43
SKP2-204ENST00000508514 ATP10BO94823 1461 aa30.21■■■□□ 2.43
SKP2-204ENST00000508514 CD109Q6YHK3 1445 aa30.21■■■□□ 2.43
SKP2-204ENST00000508514 SAMD9Q5K651 1589 aa30.2■■■□□ 2.43
SKP2-204ENST00000508514 EEA1Q15075 1411 aa30.2■■■□□ 2.42
SKP2-204ENST00000508514 MAGI3Q5TCQ9 1506 aa30.18■■■□□ 2.42
SKP2-204ENST00000508514 FAM9AQ8IZU1 332 aaPredicted RBP30.17■■■□□ 2.42
SKP2-204ENST00000508514 CFAP43Q8NDM7 1665 aa30.13■■■□□ 2.41
SKP2-204ENST00000508514 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
SKP2-204ENST00000508514 ADGRL1O94910 1474 aa30.08■■■□□ 2.41
SKP2-204ENST00000508514 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
SKP2-204ENST00000508514 RAPGEF6Q8TEU7 1601 aa30.04■■■□□ 2.4
SKP2-204ENST00000508514 NUP153P49790 1475 aaKnown RBP30.02■■■□□ 2.4
SKP2-204ENST00000508514 KIF21BO75037 1637 aa29.97■■■□□ 2.39
SKP2-204ENST00000508514 ABCA9Q8IUA7 1624 aa29.96■■■□□ 2.39
SKP2-204ENST00000508514 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
SKP2-204ENST00000508514 ARAP3Q8WWN8 1544 aa29.95■■■□□ 2.38
SKP2-204ENST00000508514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.93■■■□□ 2.38
SKP2-204ENST00000508514 HNRNPUL2Q1KMD3 747 aaKnown RBP29.93■■■□□ 2.38
SKP2-204ENST00000508514 EHMT2Q96KQ7 1210 aa29.87■■■□□ 2.37
SKP2-204ENST00000508514 EFCAB5A4FU69 1503 aa29.86■■■□□ 2.37
SKP2-204ENST00000508514 PHLDB1Q86UU1 1377 aa29.84■■■□□ 2.37
SKP2-204ENST00000508514 RAPGEF3O95398 923 aa29.83■■■□□ 2.37
SKP2-204ENST00000508514 PLEKHD1A6NEE1 506 aa29.81■■■□□ 2.36
SKP2-204ENST00000508514 NEO1Q92859 1461 aa29.8■■■□□ 2.36
SKP2-204ENST00000508514 UBTFP17480 764 aaKnown RBP29.78■■■□□ 2.36
SKP2-204ENST00000508514 FRMPD1Q5SYB0 1578 aa29.73■■■□□ 2.35
SKP2-204ENST00000508514 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
SKP2-204ENST00000508514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.72■■■□□ 2.35
SKP2-204ENST00000508514 ARHGAP35Q9NRY4 1499 aa29.72■■■□□ 2.35
SKP2-204ENST00000508514 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
SKP2-204ENST00000508514 AKNAQ7Z591 1439 aa29.65■■■□□ 2.34
SKP2-204ENST00000508514 HECW2Q9P2P5 1572 aa29.64■■■□□ 2.33
SKP2-204ENST00000508514 FANCAO15360 1455 aa29.63■■■□□ 2.33
SKP2-204ENST00000508514 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
SKP2-204ENST00000508514 DENND4BO75064 1496 aaPredicted RBP29.6■■■□□ 2.33
SKP2-204ENST00000508514 ATP1B4Q9UN42 357 aaPredicted RBP29.59■■■□□ 2.33
SKP2-204ENST00000508514 RICTORQ6R327 1708 aa29.57■■■□□ 2.32
SKP2-204ENST00000508514 ADAMTSL3P82987 1691 aa29.56■■■□□ 2.32
SKP2-204ENST00000508514 PLCH2O75038 1416 aa29.54■■■□□ 2.32
SKP2-204ENST00000508514 HECW1Q76N89 1606 aa29.53■■■□□ 2.32
SKP2-204ENST00000508514 PTPRMP28827 1452 aa29.51■■■□□ 2.31
SKP2-204ENST00000508514 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
SKP2-204ENST00000508514 ARHGEF40Q8TER5 1519 aa29.49■■■□□ 2.31
SKP2-204ENST00000508514 BCORL1Q5H9F3 1711 aa29.48■■■□□ 2.31
SKP2-204ENST00000508514 ARID4BQ4LE39 1312 aaPredicted RBP29.48■■■□□ 2.31
SKP2-204ENST00000508514 YEATS2Q9ULM3 1422 aa29.46■■■□□ 2.31
SKP2-204ENST00000508514 ZMYM4Q5VZL5 1548 aa29.46■■■□□ 2.31
SKP2-204ENST00000508514 SCAPERQ9BY12 1400 aa29.45■■■□□ 2.31
SKP2-204ENST00000508514 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
SKP2-204ENST00000508514 LRRIQ1Q96JM4 1722 aa29.44■■■□□ 2.3
SKP2-204ENST00000508514 KIF14Q15058 1648 aa29.44■■■□□ 2.3
SKP2-204ENST00000508514 TROQ12816 1431 aaPredicted RBP29.43■■■□□ 2.3
SKP2-204ENST00000508514 MADDQ8WXG6 1647 aa29.42■■■□□ 2.3
SKP2-204ENST00000508514 SIGLEC1Q9BZZ2 1709 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms