RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
NEDD4-207ENST00000508075 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
NEDD4-207ENST00000508075 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
NEDD4-207ENST00000508075 CUL7Q14999 1698 aa24.98■■□□□ 1.59
NEDD4-207ENST00000508075 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
NEDD4-207ENST00000508075 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
NEDD4-207ENST00000508075 KIAA0586Q9BVV6 1533 aa24.86■■□□□ 1.57
NEDD4-207ENST00000508075 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
NEDD4-207ENST00000508075 ADCY10Q96PN6 1610 aa24.78■■□□□ 1.56
NEDD4-207ENST00000508075 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
NEDD4-207ENST00000508075 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
NEDD4-207ENST00000508075 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
NEDD4-207ENST00000508075 PTPRGP23470 1445 aa24.65■■□□□ 1.54
NEDD4-207ENST00000508075 FAM69CQ0P6D2 419 aa24.63■■□□□ 1.53
NEDD4-207ENST00000508075 DISP1Q96F81 1524 aa24.61■■□□□ 1.53
NEDD4-207ENST00000508075 CARMIL2Q6F5E8 1435 aa24.6■■□□□ 1.53
NEDD4-207ENST00000508075 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
NEDD4-207ENST00000508075 DIP2BQ9P265 1576 aa24.59■■□□□ 1.53
NEDD4-207ENST00000508075 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
NEDD4-207ENST00000508075 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.52
NEDD4-207ENST00000508075 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
NEDD4-207ENST00000508075 CTTNBP2Q8WZ74 1663 aa24.56■■□□□ 1.52
NEDD4-207ENST00000508075 UGGT2Q9NYU1 1516 aa24.52■■□□□ 1.52
NEDD4-207ENST00000508075 KIAA0556O60303 1618 aa24.52■■□□□ 1.52
NEDD4-207ENST00000508075 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
NEDD4-207ENST00000508075 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
NEDD4-207ENST00000508075 UACAQ9BZF9 1416 aa24.45■■□□□ 1.51
NEDD4-207ENST00000508075 ASXL2Q76L83 1435 aa24.43■■□□□ 1.5
NEDD4-207ENST00000508075 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
NEDD4-207ENST00000508075 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.5
NEDD4-207ENST00000508075 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
NEDD4-207ENST00000508075 P3H3Q8IVL6 736 aa24.38■■□□□ 1.49
NEDD4-207ENST00000508075 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
NEDD4-207ENST00000508075 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
NEDD4-207ENST00000508075 KDM6BO15054 1643 aa24.33■■□□□ 1.49
NEDD4-207ENST00000508075 RANGAP1P46060 587 aaPredicted RBP24.33■■□□□ 1.49
NEDD4-207ENST00000508075 PPRC1Q5VV67 1664 aaKnown RBP24.33■■□□□ 1.49
NEDD4-207ENST00000508075 KDM5BQ9UGL1 1544 aa24.31■■□□□ 1.48
NEDD4-207ENST00000508075 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
NEDD4-207ENST00000508075 EHMT2Q96KQ7 1210 aa24.29■■□□□ 1.48
NEDD4-207ENST00000508075 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
NEDD4-207ENST00000508075 ABCA8O94911 1581 aa24.26■■□□□ 1.47
NEDD4-207ENST00000508075 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
NEDD4-207ENST00000508075 GLI2P10070 1586 aa24.25■■□□□ 1.47
NEDD4-207ENST00000508075 MAP3K4Q9Y6R4 1608 aa24.21■■□□□ 1.47
NEDD4-207ENST00000508075 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
NEDD4-207ENST00000508075 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
NEDD4-207ENST00000508075 SAMD9Q5K651 1589 aa24.16■■□□□ 1.46
NEDD4-207ENST00000508075 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.46
NEDD4-207ENST00000508075 EEA1Q15075 1411 aa24.13■■□□□ 1.45
NEDD4-207ENST00000508075 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
NEDD4-207ENST00000508075 ATP10BO94823 1461 aa24.07■■□□□ 1.44
NEDD4-207ENST00000508075 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
NEDD4-207ENST00000508075 KIF21BO75037 1637 aa24.06■■□□□ 1.44
NEDD4-207ENST00000508075 KDM4FA0A1W2PPD8 638 aa24.04■■□□□ 1.44
NEDD4-207ENST00000508075 CD109Q6YHK3 1445 aa24.02■■□□□ 1.44
NEDD4-207ENST00000508075 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
NEDD4-207ENST00000508075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
NEDD4-207ENST00000508075 HNRNPUL2Q1KMD3 747 aaKnown RBP24.02■■□□□ 1.44
NEDD4-207ENST00000508075 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
NEDD4-207ENST00000508075 NUP153P49790 1475 aaKnown RBP23.96■■□□□ 1.43
NEDD4-207ENST00000508075 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
NEDD4-207ENST00000508075 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
NEDD4-207ENST00000508075 ADGRL1O94910 1474 aa23.88■■□□□ 1.41
NEDD4-207ENST00000508075 ABCA9Q8IUA7 1624 aa23.88■■□□□ 1.41
NEDD4-207ENST00000508075 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
NEDD4-207ENST00000508075 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
NEDD4-207ENST00000508075 ATP1B4Q9UN42 357 aaPredicted RBP23.84■■□□□ 1.41
NEDD4-207ENST00000508075 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
NEDD4-207ENST00000508075 PLEKHD1A6NEE1 506 aa23.76■■□□□ 1.39
NEDD4-207ENST00000508075 RAPGEF3O95398 923 aa23.76■■□□□ 1.39
NEDD4-207ENST00000508075 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
NEDD4-207ENST00000508075 ARAP3Q8WWN8 1544 aa23.74■■□□□ 1.39
NEDD4-207ENST00000508075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.73■■□□□ 1.39
NEDD4-207ENST00000508075 LRRIQ1Q96JM4 1722 aa23.71■■□□□ 1.39
NEDD4-207ENST00000508075 FRMPD1Q5SYB0 1578 aa23.7■■□□□ 1.38
NEDD4-207ENST00000508075 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
NEDD4-207ENST00000508075 NEO1Q92859 1461 aa23.66■■□□□ 1.38
NEDD4-207ENST00000508075 FMN1Q68DA7 1419 aa23.64■■□□□ 1.37
NEDD4-207ENST00000508075 KIF14Q15058 1648 aa23.62■■□□□ 1.37
NEDD4-207ENST00000508075 FANCAO15360 1455 aa23.62■■□□□ 1.37
NEDD4-207ENST00000508075 AKNAQ7Z591 1439 aa23.6■■□□□ 1.37
NEDD4-207ENST00000508075 RICTORQ6R327 1708 aa23.6■■□□□ 1.37
NEDD4-207ENST00000508075 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
NEDD4-207ENST00000508075 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
NEDD4-207ENST00000508075 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
NEDD4-207ENST00000508075 CFAP74Q9C0B2 1584 aa23.55■■□□□ 1.36
NEDD4-207ENST00000508075 MYO5CQ9NQX4 1742 aa23.54■■□□□ 1.36
NEDD4-207ENST00000508075 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
NEDD4-207ENST00000508075 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
NEDD4-207ENST00000508075 SIGLEC1Q9BZZ2 1709 aa23.51■■□□□ 1.35
NEDD4-207ENST00000508075 PLCH2O75038 1416 aa23.5■■□□□ 1.35
NEDD4-207ENST00000508075 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
NEDD4-207ENST00000508075 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
NEDD4-207ENST00000508075 ADAMTSL3P82987 1691 aa23.49■■□□□ 1.35
NEDD4-207ENST00000508075 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
NEDD4-207ENST00000508075 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
NEDD4-207ENST00000508075 BCORL1Q5H9F3 1711 aa23.48■■□□□ 1.35
NEDD4-207ENST00000508075 CLIP1P30622 1438 aa23.48■■□□□ 1.35
NEDD4-207ENST00000508075 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms