RNA–Protein interactions for RNA: ENST00000507216.1

SLC38A9-213, Transcript of solute carrier family 38 member 9, humanhuman

TSL 3

Gene SLC38A9, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-213ENST00000507216 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
SLC38A9-213ENST00000507216 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
SLC38A9-213ENST00000507216 CUX2O14529 1486 aa14.06□□□□□ -0.16
SLC38A9-213ENST00000507216 POTEGQ6S5H5 508 aa14.05□□□□□ -0.16
SLC38A9-213ENST00000507216 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
SLC38A9-213ENST00000507216 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
SLC38A9-213ENST00000507216 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
SLC38A9-213ENST00000507216 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
SLC38A9-213ENST00000507216 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
SLC38A9-213ENST00000507216 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
SLC38A9-213ENST00000507216 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
SLC38A9-213ENST00000507216 LCE2DQ5TA82 110 aaPredicted RBP13.78□□□□□ -0.2
SLC38A9-213ENST00000507216 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
SLC38A9-213ENST00000507216 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
SLC38A9-213ENST00000507216 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
SLC38A9-213ENST00000507216 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
SLC38A9-213ENST00000507216 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
SLC38A9-213ENST00000507216 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
SLC38A9-213ENST00000507216 FAM163AQ96GL9 167 aaPredicted RBP13.61□□□□□ -0.23
SLC38A9-213ENST00000507216 NESP48681 1621 aa13.61□□□□□ -0.23
SLC38A9-213ENST00000507216 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
SLC38A9-213ENST00000507216 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
SLC38A9-213ENST00000507216 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
SLC38A9-213ENST00000507216 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
SLC38A9-213ENST00000507216 C7P10643 843 aa13.58□□□□□ -0.24
SLC38A9-213ENST00000507216 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
SLC38A9-213ENST00000507216 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
SLC38A9-213ENST00000507216 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
SLC38A9-213ENST00000507216 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
SLC38A9-213ENST00000507216 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
SLC38A9-213ENST00000507216 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
SLC38A9-213ENST00000507216 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
SLC38A9-213ENST00000507216 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
SLC38A9-213ENST00000507216 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
SLC38A9-213ENST00000507216 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
SLC38A9-213ENST00000507216 POTEFA5A3E0 1075 aa13.42□□□□□ -0.26
SLC38A9-213ENST00000507216 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
SLC38A9-213ENST00000507216 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
SLC38A9-213ENST00000507216 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
SLC38A9-213ENST00000507216 PEG3Q9GZU2 1588 aa13.4□□□□□ -0.26
SLC38A9-213ENST00000507216 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
SLC38A9-213ENST00000507216 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
SLC38A9-213ENST00000507216 WDR62O43379 1518 aa13.34□□□□□ -0.27
SLC38A9-213ENST00000507216 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
SLC38A9-213ENST00000507216 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
SLC38A9-213ENST00000507216 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
SLC38A9-213ENST00000507216 TRPC6Q9Y210 931 aa13.27□□□□□ -0.29
SLC38A9-213ENST00000507216 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
SLC38A9-213ENST00000507216 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
SLC38A9-213ENST00000507216 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
SLC38A9-213ENST00000507216 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
SLC38A9-213ENST00000507216 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
SLC38A9-213ENST00000507216 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
SLC38A9-213ENST00000507216 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
SLC38A9-213ENST00000507216 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
SLC38A9-213ENST00000507216 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
SLC38A9-213ENST00000507216 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
SLC38A9-213ENST00000507216 ST18O60284 1047 aa13.15□□□□□ -0.3
SLC38A9-213ENST00000507216 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
SLC38A9-213ENST00000507216 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
SLC38A9-213ENST00000507216 TIE1P35590 1138 aa13.13□□□□□ -0.31
SLC38A9-213ENST00000507216 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
SLC38A9-213ENST00000507216 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
SLC38A9-213ENST00000507216 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
SLC38A9-213ENST00000507216 MAP3K13O43283 966 aa13.09□□□□□ -0.31
SLC38A9-213ENST00000507216 SEC24BO95487 1268 aa13.09□□□□□ -0.31
SLC38A9-213ENST00000507216 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
SLC38A9-213ENST00000507216 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
SLC38A9-213ENST00000507216 CFTRP13569 1480 aa13.04□□□□□ -0.32
SLC38A9-213ENST00000507216 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
SLC38A9-213ENST00000507216 IER5LQ5T953 404 aa12.97□□□□□ -0.33
SLC38A9-213ENST00000507216 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SLC38A9-213ENST00000507216 WIZO95785 1651 aa12.95□□□□□ -0.34
SLC38A9-213ENST00000507216 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
SLC38A9-213ENST00000507216 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
SLC38A9-213ENST00000507216 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
SLC38A9-213ENST00000507216 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
SLC38A9-213ENST00000507216 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
SLC38A9-213ENST00000507216 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
SLC38A9-213ENST00000507216 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
SLC38A9-213ENST00000507216 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
SLC38A9-213ENST00000507216 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
SLC38A9-213ENST00000507216 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
SLC38A9-213ENST00000507216 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
SLC38A9-213ENST00000507216 PROM2Q8N271 834 aa12.81□□□□□ -0.36
SLC38A9-213ENST00000507216 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
SLC38A9-213ENST00000507216 CHD1O14646 1710 aa12.81□□□□□ -0.36
SLC38A9-213ENST00000507216 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
SLC38A9-213ENST00000507216 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
SLC38A9-213ENST00000507216 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
SLC38A9-213ENST00000507216 PLCG2P16885 1265 aa12.79□□□□□ -0.36
SLC38A9-213ENST00000507216 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
SLC38A9-213ENST00000507216 ABCC8Q09428 1581 aa12.77□□□□□ -0.37
SLC38A9-213ENST00000507216 TARBP1Q13395 1621 aaKnown RBP12.75□□□□□ -0.37
SLC38A9-213ENST00000507216 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
SLC38A9-213ENST00000507216 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
SLC38A9-213ENST00000507216 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
SLC38A9-213ENST00000507216 SNPHO15079 494 aa12.73□□□□□ -0.37
SLC38A9-213ENST00000507216 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC38A9-213ENST00000507216 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms