RNA–Protein interactions for RNA: ENST00000507179.1

SKI-203, Transcript of SKI proto-oncogene, humanhuman

TSL 2

Gene SKI, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-203ENST00000507179 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
SKI-203ENST00000507179 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
SKI-203ENST00000507179 CUL7Q14999 1698 aa22.39■■□□□ 1.18
SKI-203ENST00000507179 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
SKI-203ENST00000507179 ADCY10Q96PN6 1610 aa22.29■■□□□ 1.16
SKI-203ENST00000507179 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
SKI-203ENST00000507179 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
SKI-203ENST00000507179 MAPKBP1O60336 1514 aa22.22■■□□□ 1.15
SKI-203ENST00000507179 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
SKI-203ENST00000507179 FAM69CQ0P6D2 419 aa22.21■■□□□ 1.15
SKI-203ENST00000507179 PTPRGP23470 1445 aa22.2■■□□□ 1.14
SKI-203ENST00000507179 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
SKI-203ENST00000507179 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
SKI-203ENST00000507179 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
SKI-203ENST00000507179 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
SKI-203ENST00000507179 DIP2BQ9P265 1576 aa22.15■■□□□ 1.14
SKI-203ENST00000507179 DISP1Q96F81 1524 aa22.14■■□□□ 1.13
SKI-203ENST00000507179 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.13
SKI-203ENST00000507179 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
SKI-203ENST00000507179 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
SKI-203ENST00000507179 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
SKI-203ENST00000507179 UHRF1BP1LA0JNW5 1464 aa22.03■■□□□ 1.12
SKI-203ENST00000507179 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
SKI-203ENST00000507179 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
SKI-203ENST00000507179 KIAA0556O60303 1618 aa21.99■■□□□ 1.11
SKI-203ENST00000507179 PRXQ9BXM0 1461 aa21.97■■□□□ 1.11
SKI-203ENST00000507179 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
SKI-203ENST00000507179 TSPOAP1O95153 1857 aa21.95■■□□□ 1.1
SKI-203ENST00000507179 KDM5BQ9UGL1 1544 aa21.95■■□□□ 1.1
SKI-203ENST00000507179 KDM6BO15054 1643 aa21.91■■□□□ 1.1
SKI-203ENST00000507179 GLI2P10070 1586 aa21.91■■□□□ 1.1
SKI-203ENST00000507179 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
SKI-203ENST00000507179 PPRC1Q5VV67 1664 aaKnown RBP21.88■■□□□ 1.09
SKI-203ENST00000507179 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
SKI-203ENST00000507179 EPRSP07814 1512 aaKnown RBP21.87■■□□□ 1.09
SKI-203ENST00000507179 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
SKI-203ENST00000507179 ABCA8O94911 1581 aa21.81■■□□□ 1.08
SKI-203ENST00000507179 COL17A1Q9UMD9 1497 aaPredicted RBP21.8■■□□□ 1.08
SKI-203ENST00000507179 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
SKI-203ENST00000507179 MAP3K4Q9Y6R4 1608 aa21.8■■□□□ 1.08
SKI-203ENST00000507179 KDM4FA0A1W2PPD8 638 aa21.79■■□□□ 1.08
SKI-203ENST00000507179 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
SKI-203ENST00000507179 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
SKI-203ENST00000507179 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
SKI-203ENST00000507179 KCNH8Q96L42 1107 aa21.7■■□□□ 1.06
SKI-203ENST00000507179 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
SKI-203ENST00000507179 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
SKI-203ENST00000507179 ATP10BO94823 1461 aa21.65■■□□□ 1.06
SKI-203ENST00000507179 CD109Q6YHK3 1445 aa21.65■■□□□ 1.06
SKI-203ENST00000507179 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
SKI-203ENST00000507179 EEA1Q15075 1411 aa21.64■■□□□ 1.06
SKI-203ENST00000507179 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
SKI-203ENST00000507179 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
SKI-203ENST00000507179 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
SKI-203ENST00000507179 ADGRL1O94910 1474 aa21.57■■□□□ 1.04
SKI-203ENST00000507179 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
SKI-203ENST00000507179 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
SKI-203ENST00000507179 NUP153P49790 1475 aaKnown RBP21.53■■□□□ 1.04
SKI-203ENST00000507179 KIF21BO75037 1637 aa21.51■■□□□ 1.03
SKI-203ENST00000507179 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
SKI-203ENST00000507179 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
SKI-203ENST00000507179 ARAP3Q8WWN8 1544 aa21.46■■□□□ 1.03
SKI-203ENST00000507179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
SKI-203ENST00000507179 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
SKI-203ENST00000507179 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
SKI-203ENST00000507179 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
SKI-203ENST00000507179 RAPGEF3O95398 923 aa21.39■■□□□ 1.01
SKI-203ENST00000507179 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
SKI-203ENST00000507179 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
SKI-203ENST00000507179 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
SKI-203ENST00000507179 NEO1Q92859 1461 aa21.35■■□□□ 1.01
SKI-203ENST00000507179 FRMPD1Q5SYB0 1578 aa21.32■■□□□ 1
SKI-203ENST00000507179 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
SKI-203ENST00000507179 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
SKI-203ENST00000507179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.3■■□□□ 14e-6■■■□□ 15.9
SKI-203ENST00000507179 TTC37Q6PGP7 1564 aa21.27■■□□□ 1
SKI-203ENST00000507179 AKNAQ7Z591 1439 aa21.25■□□□□ 0.99
SKI-203ENST00000507179 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
SKI-203ENST00000507179 FANCAO15360 1455 aa21.25■□□□□ 0.99
SKI-203ENST00000507179 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
SKI-203ENST00000507179 ATP1B4Q9UN42 357 aaPredicted RBP21.22■□□□□ 0.99
SKI-203ENST00000507179 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
SKI-203ENST00000507179 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
SKI-203ENST00000507179 RICTORQ6R327 1708 aa21.19■□□□□ 0.98
SKI-203ENST00000507179 HECW1Q76N89 1606 aa21.18■□□□□ 0.98
SKI-203ENST00000507179 PLCH2O75038 1416 aa21.17■□□□□ 0.98
SKI-203ENST00000507179 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
SKI-203ENST00000507179 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.98
SKI-203ENST00000507179 PTPRMP28827 1452 aa21.14■□□□□ 0.98
SKI-203ENST00000507179 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
SKI-203ENST00000507179 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
SKI-203ENST00000507179 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
SKI-203ENST00000507179 KIF14Q15058 1648 aa21.12■□□□□ 0.97
SKI-203ENST00000507179 ZMYM4Q5VZL5 1548 aa21.12■□□□□ 0.97
SKI-203ENST00000507179 SCAPERQ9BY12 1400 aa21.12■□□□□ 0.97
SKI-203ENST00000507179 LRRIQ1Q96JM4 1722 aa21.11■□□□□ 0.97
SKI-203ENST00000507179 TROQ12816 1431 aaPredicted RBP21.1■□□□□ 0.97
SKI-203ENST00000507179 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
SKI-203ENST00000507179 POGZQ7Z3K3 1410 aa21.09■□□□□ 0.97
SKI-203ENST00000507179 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms