RNA–Protein interactions for RNA: ENST00000507177.5

SERF1B-205, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 5

Gene SERF1B, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-205ENST00000507177 JPH4Q96JJ6 628 aa26.78■■□□□ 1.88
SERF1B-205ENST00000507177 KIAA0586Q9BVV6 1533 aa26.73■■□□□ 1.87
SERF1B-205ENST00000507177 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
SERF1B-205ENST00000507177 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
SERF1B-205ENST00000507177 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
SERF1B-205ENST00000507177 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
SERF1B-205ENST00000507177 IQGAP2Q13576 1575 aa26.53■■□□□ 1.84
SERF1B-205ENST00000507177 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
SERF1B-205ENST00000507177 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
SERF1B-205ENST00000507177 EEA1Q15075 1411 aa26.43■■□□□ 1.82
SERF1B-205ENST00000507177 CARMIL2Q6F5E8 1435 aa26.41■■□□□ 1.82
SERF1B-205ENST00000507177 DISP1Q96F81 1524 aa26.41■■□□□ 1.82
SERF1B-205ENST00000507177 UGGT2Q9NYU1 1516 aa26.41■■□□□ 1.82
SERF1B-205ENST00000507177 FAM9AQ8IZU1 332 aaPredicted RBP26.39■■□□□ 1.82
SERF1B-205ENST00000507177 PTPRGP23470 1445 aa26.39■■□□□ 1.81
SERF1B-205ENST00000507177 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
SERF1B-205ENST00000507177 CTTNBP2Q8WZ74 1663 aa26.36■■□□□ 1.81
SERF1B-205ENST00000507177 TTBK1Q5TCY1 1321 aaPredicted RBP26.36■■□□□ 1.81
SERF1B-205ENST00000507177 ADCY10Q96PN6 1610 aa26.34■■□□□ 1.81
SERF1B-205ENST00000507177 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
SERF1B-205ENST00000507177 NPM1P06748 294 aaKnown RBP eCLIP26.24■■□□□ 1.79
SERF1B-205ENST00000507177 GOLGA3Q08378 1498 aa26.21■■□□□ 1.79
SERF1B-205ENST00000507177 UACAQ9BZF9 1416 aa26.2■■□□□ 1.78
SERF1B-205ENST00000507177 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
SERF1B-205ENST00000507177 UHRF1BP1LA0JNW5 1464 aa26.18■■□□□ 1.78
SERF1B-205ENST00000507177 KIF21BO75037 1637 aa26.18■■□□□ 1.78
SERF1B-205ENST00000507177 ABCC2Q92887 1545 aa26.16■■□□□ 1.78
SERF1B-205ENST00000507177 ABCC10Q5T3U5 1492 aa26.11■■□□□ 1.77
SERF1B-205ENST00000507177 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
SERF1B-205ENST00000507177 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
SERF1B-205ENST00000507177 KIF13AQ9H1H9 1805 aa26.09■■□□□ 1.77
SERF1B-205ENST00000507177 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
SERF1B-205ENST00000507177 FAM69CQ0P6D2 419 aa26.07■■□□□ 1.76
SERF1B-205ENST00000507177 SAMD9Q5K651 1589 aa26.07■■□□□ 1.76
SERF1B-205ENST00000507177 KDM5BQ9UGL1 1544 aa26.06■■□□□ 1.76
SERF1B-205ENST00000507177 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
SERF1B-205ENST00000507177 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
SERF1B-205ENST00000507177 ABCA8O94911 1581 aa26.03■■□□□ 1.76
SERF1B-205ENST00000507177 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
SERF1B-205ENST00000507177 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
SERF1B-205ENST00000507177 ZCCHC11Q5TAX3 1644 aaKnown RBP25.98■■□□□ 1.75
SERF1B-205ENST00000507177 FHOD3Q2V2M9 1422 aa25.94■■□□□ 1.74
SERF1B-205ENST00000507177 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
SERF1B-205ENST00000507177 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
SERF1B-205ENST00000507177 EPRSP07814 1512 aaKnown RBP25.87■■□□□ 1.73
SERF1B-205ENST00000507177 GLI2P10070 1586 aa25.86■■□□□ 1.73
SERF1B-205ENST00000507177 ATP10BO94823 1461 aa25.85■■□□□ 1.73
SERF1B-205ENST00000507177 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
SERF1B-205ENST00000507177 RAPGEF6Q8TEU7 1601 aa25.84■■□□□ 1.73
SERF1B-205ENST00000507177 TSPOAP1O95153 1857 aa25.81■■□□□ 1.72
SERF1B-205ENST00000507177 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
SERF1B-205ENST00000507177 NUP153P49790 1475 aaKnown RBP25.79■■□□□ 1.72
SERF1B-205ENST00000507177 KCNH8Q96L42 1107 aa25.75■■□□□ 1.71
SERF1B-205ENST00000507177 PPRC1Q5VV67 1664 aaKnown RBP25.74■■□□□ 1.71
SERF1B-205ENST00000507177 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
SERF1B-205ENST00000507177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
SERF1B-205ENST00000507177 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
SERF1B-205ENST00000507177 FMN1Q68DA7 1419 aa25.66■■□□□ 1.7
SERF1B-205ENST00000507177 CD109Q6YHK3 1445 aa25.64■■□□□ 1.7
SERF1B-205ENST00000507177 KDM6BO15054 1643 aa25.64■■□□□ 1.7
SERF1B-205ENST00000507177 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
SERF1B-205ENST00000507177 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
SERF1B-205ENST00000507177 COL17A1Q9UMD9 1497 aaPredicted RBP25.59■■□□□ 1.69
SERF1B-205ENST00000507177 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
SERF1B-205ENST00000507177 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.69
SERF1B-205ENST00000507177 CLIP1P30622 1438 aa25.57■■□□□ 1.68
SERF1B-205ENST00000507177 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
SERF1B-205ENST00000507177 ATP1B4Q9UN42 357 aaPredicted RBP25.57■■□□□ 1.68
SERF1B-205ENST00000507177 ABCA9Q8IUA7 1624 aa25.55■■□□□ 1.68
SERF1B-205ENST00000507177 HECW1Q76N89 1606 aa25.54■■□□□ 1.68
SERF1B-205ENST00000507177 CASKIN1Q8WXD9 1431 aa25.48■■□□□ 1.67
SERF1B-205ENST00000507177 LOC105371045A0A1W2PR82 267 aa25.48■■□□□ 1.67
SERF1B-205ENST00000507177 PCF11O94913 1555 aaKnown RBP25.46■■□□□ 1.67
SERF1B-205ENST00000507177 LRRIQ1Q96JM4 1722 aa25.45■■□□□ 1.66
SERF1B-205ENST00000507177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.43■■□□□ 1.66
SERF1B-205ENST00000507177 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
SERF1B-205ENST00000507177 CDK11AQ9UQ88 783 aaPredicted RBP25.39■■□□□ 1.66
SERF1B-205ENST00000507177 TTC37Q6PGP7 1564 aa25.39■■□□□ 1.65
SERF1B-205ENST00000507177 ARAP3Q8WWN8 1544 aa25.38■■□□□ 1.65
SERF1B-205ENST00000507177 FYCO1Q9BQS8 1478 aa25.38■■□□□ 1.65
SERF1B-205ENST00000507177 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
SERF1B-205ENST00000507177 NEO1Q92859 1461 aa25.36■■□□□ 1.65
SERF1B-205ENST00000507177 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
SERF1B-205ENST00000507177 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
SERF1B-205ENST00000507177 KIF14Q15058 1648 aa25.32■■□□□ 1.64
SERF1B-205ENST00000507177 FANCAO15360 1455 aa25.29■■□□□ 1.64
SERF1B-205ENST00000507177 RAPGEF3O95398 923 aa25.29■■□□□ 1.64
SERF1B-205ENST00000507177 PLCH2O75038 1416 aa25.29■■□□□ 1.64
SERF1B-205ENST00000507177 AKNAQ7Z591 1439 aa25.27■■□□□ 1.64
SERF1B-205ENST00000507177 KDM4FA0A1W2PPD8 638 aa25.24■■□□□ 1.63
SERF1B-205ENST00000507177 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
SERF1B-205ENST00000507177 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
SERF1B-205ENST00000507177 CFAP74Q9C0B2 1584 aa25.21■■□□□ 1.63
SERF1B-205ENST00000507177 MYO5CQ9NQX4 1742 aa25.19■■□□□ 1.62
SERF1B-205ENST00000507177 DENND4BO75064 1496 aaPredicted RBP25.19■■□□□ 1.62
SERF1B-205ENST00000507177 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
SERF1B-205ENST00000507177 ADGRL1O94910 1474 aa25.15■■□□□ 1.62
SERF1B-205ENST00000507177 RICTORQ6R327 1708 aa25.14■■□□□ 1.61
SERF1B-205ENST00000507177 SCAPERQ9BY12 1400 aa25.13■■□□□ 1.61
SERF1B-205ENST00000507177 ARHGAP5Q13017 1502 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms