RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
SNX2-205ENST00000506874 CUL7Q14999 1698 aa28.31■■■□□ 2.12
SNX2-205ENST00000506874 KIF13AQ9H1H9 1805 aa28.29■■■□□ 2.12
SNX2-205ENST00000506874 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
SNX2-205ENST00000506874 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
SNX2-205ENST00000506874 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
SNX2-205ENST00000506874 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
SNX2-205ENST00000506874 ADCY10Q96PN6 1610 aa28.2■■■□□ 2.1
SNX2-205ENST00000506874 FAM69CQ0P6D2 419 aa28.19■■■□□ 2.1
SNX2-205ENST00000506874 TTBK1Q5TCY1 1321 aaPredicted RBP28.16■■■□□ 2.1
SNX2-205ENST00000506874 ABCC10Q5T3U5 1492 aa28.15■■■□□ 2.1
SNX2-205ENST00000506874 MAPKBP1O60336 1514 aa28.13■■■□□ 2.09
SNX2-205ENST00000506874 PTPRGP23470 1445 aa28.08■■■□□ 2.09
SNX2-205ENST00000506874 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
SNX2-205ENST00000506874 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
SNX2-205ENST00000506874 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
SNX2-205ENST00000506874 TNIKQ9UKE5 1360 aa28.01■■■□□ 2.07
SNX2-205ENST00000506874 TSPOAP1O95153 1857 aa27.98■■■□□ 2.07
SNX2-205ENST00000506874 RAPGEF2Q9Y4G8 1499 aa27.93■■■□□ 2.06
SNX2-205ENST00000506874 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
SNX2-205ENST00000506874 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
SNX2-205ENST00000506874 KDM6BO15054 1643 aa27.87■■■□□ 2.05
SNX2-205ENST00000506874 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
SNX2-205ENST00000506874 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
SNX2-205ENST00000506874 UHRF1BP1LA0JNW5 1464 aa27.83■■■□□ 2.04
SNX2-205ENST00000506874 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
SNX2-205ENST00000506874 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
SNX2-205ENST00000506874 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
SNX2-205ENST00000506874 GLI2P10070 1586 aa27.73■■■□□ 2.03
SNX2-205ENST00000506874 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
SNX2-205ENST00000506874 KDM5BQ9UGL1 1544 aa27.71■■■□□ 2.03
SNX2-205ENST00000506874 PPRC1Q5VV67 1664 aaKnown RBP27.7■■■□□ 2.02
SNX2-205ENST00000506874 ZCCHC11Q5TAX3 1644 aaKnown RBP27.69■■■□□ 2.02
SNX2-205ENST00000506874 EPRSP07814 1512 aaKnown RBP27.67■■■□□ 2.02
SNX2-205ENST00000506874 KDM4FA0A1W2PPD8 638 aa27.64■■■□□ 2.02
SNX2-205ENST00000506874 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
SNX2-205ENST00000506874 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
SNX2-205ENST00000506874 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
SNX2-205ENST00000506874 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
SNX2-205ENST00000506874 COL17A1Q9UMD9 1497 aaPredicted RBP27.53■■■□□ 2
SNX2-205ENST00000506874 TEX14Q8IWB6 1497 aa27.52■■■□□ 2
SNX2-205ENST00000506874 ABCA8O94911 1581 aa27.52■■■□□ 2
SNX2-205ENST00000506874 KCNH8Q96L42 1107 aa27.5■■□□□ 1.99
SNX2-205ENST00000506874 P3H3Q8IVL6 736 aa27.48■■□□□ 1.99
SNX2-205ENST00000506874 ARID3CA6NKF2 412 aa27.45■■□□□ 1.98
SNX2-205ENST00000506874 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
SNX2-205ENST00000506874 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
SNX2-205ENST00000506874 FAM9AQ8IZU1 332 aaPredicted RBP27.4■■□□□ 1.98
SNX2-205ENST00000506874 ADGRL1O94910 1474 aa27.39■■□□□ 1.98
SNX2-205ENST00000506874 CFAP43Q8NDM7 1665 aa27.38■■□□□ 1.97
SNX2-205ENST00000506874 MAGI3Q5TCQ9 1506 aa27.34■■□□□ 1.97
SNX2-205ENST00000506874 RANGAP1P46060 587 aaPredicted RBP27.32■■□□□ 1.96
SNX2-205ENST00000506874 ATP10BO94823 1461 aa27.31■■□□□ 1.96
SNX2-205ENST00000506874 SAMD9Q5K651 1589 aa27.29■■□□□ 1.96
SNX2-205ENST00000506874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
SNX2-205ENST00000506874 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
SNX2-205ENST00000506874 EEA1Q15075 1411 aa27.23■■□□□ 1.95
SNX2-205ENST00000506874 RAPGEF6Q8TEU7 1601 aa27.23■■□□□ 1.95
SNX2-205ENST00000506874 FHOD3Q2V2M9 1422 aa27.16■■□□□ 1.94
SNX2-205ENST00000506874 ABCA9Q8IUA7 1624 aa27.15■■□□□ 1.94
SNX2-205ENST00000506874 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
SNX2-205ENST00000506874 NUP153P49790 1475 aaKnown RBP27.12■■□□□ 1.93
SNX2-205ENST00000506874 KIF21BO75037 1637 aa27.12■■□□□ 1.93
SNX2-205ENST00000506874 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
SNX2-205ENST00000506874 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
SNX2-205ENST00000506874 PHLDB1Q86UU1 1377 aa27.05■■□□□ 1.92
SNX2-205ENST00000506874 HECW2Q9P2P5 1572 aa27.04■■□□□ 1.92
SNX2-205ENST00000506874 PLEKHD1A6NEE1 506 aa27.02■■□□□ 1.92
SNX2-205ENST00000506874 NEO1Q92859 1461 aa27.01■■□□□ 1.91
SNX2-205ENST00000506874 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
SNX2-205ENST00000506874 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.9
SNX2-205ENST00000506874 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
SNX2-205ENST00000506874 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
SNX2-205ENST00000506874 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
SNX2-205ENST00000506874 ATP1B4Q9UN42 357 aaPredicted RBP26.89■■□□□ 1.9
SNX2-205ENST00000506874 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.89
SNX2-205ENST00000506874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.89
SNX2-205ENST00000506874 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SNX2-205ENST00000506874 AKNAQ7Z591 1439 aa26.87■■□□□ 1.89
SNX2-205ENST00000506874 TTC37Q6PGP7 1564 aa26.86■■□□□ 1.89
SNX2-205ENST00000506874 FANCAO15360 1455 aa26.86■■□□□ 1.89
SNX2-205ENST00000506874 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
SNX2-205ENST00000506874 ADAMTSL3P82987 1691 aa26.85■■□□□ 1.89
SNX2-205ENST00000506874 RICTORQ6R327 1708 aa26.82■■□□□ 1.88
SNX2-205ENST00000506874 PTPRMP28827 1452 aa26.82■■□□□ 1.88
SNX2-205ENST00000506874 CFAP74Q9C0B2 1584 aa26.82■■□□□ 1.88
SNX2-205ENST00000506874 BCORL1Q5H9F3 1711 aa26.81■■□□□ 1.88
SNX2-205ENST00000506874 ARHGAP35Q9NRY4 1499 aa26.79■■□□□ 1.88
SNX2-205ENST00000506874 ARHGEF40Q8TER5 1519 aa26.79■■□□□ 1.88
SNX2-205ENST00000506874 FMN1Q68DA7 1419 aa26.78■■□□□ 1.88
SNX2-205ENST00000506874 MADDQ8WXG6 1647 aa26.77■■□□□ 1.88
SNX2-205ENST00000506874 HECW1Q76N89 1606 aa26.76■■□□□ 1.87
SNX2-205ENST00000506874 PLCH2O75038 1416 aa26.71■■□□□ 1.87
SNX2-205ENST00000506874 CDK11AQ9UQ88 783 aaPredicted RBP26.7■■□□□ 1.86
SNX2-205ENST00000506874 YEATS2Q9ULM3 1422 aa26.7■■□□□ 1.86
SNX2-205ENST00000506874 SCAPERQ9BY12 1400 aa26.69■■□□□ 1.86
SNX2-205ENST00000506874 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
SNX2-205ENST00000506874 ZMYM4Q5VZL5 1548 aa26.69■■□□□ 1.86
SNX2-205ENST00000506874 ZFYVE16Q7Z3T8 1539 aa26.69■■□□□ 1.86
SNX2-205ENST00000506874 PLPPR3Q6T4P5 718 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms