RNA–Protein interactions for RNA: ENST00000506727.1

PKD2-204, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-204ENST00000506727 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
PKD2-204ENST00000506727 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
PKD2-204ENST00000506727 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
PKD2-204ENST00000506727 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
PKD2-204ENST00000506727 TSPOAP1O95153 1857 aa16.49■□□□□ 0.23
PKD2-204ENST00000506727 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
PKD2-204ENST00000506727 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
PKD2-204ENST00000506727 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
PKD2-204ENST00000506727 NUP160Q12769 1436 aa16.42■□□□□ 0.22
PKD2-204ENST00000506727 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
PKD2-204ENST00000506727 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
PKD2-204ENST00000506727 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
PKD2-204ENST00000506727 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
PKD2-204ENST00000506727 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
PKD2-204ENST00000506727 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
PKD2-204ENST00000506727 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
PKD2-204ENST00000506727 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
PKD2-204ENST00000506727 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
PKD2-204ENST00000506727 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
PKD2-204ENST00000506727 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
PKD2-204ENST00000506727 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
PKD2-204ENST00000506727 GLI2P10070 1586 aa16.21■□□□□ 0.18
PKD2-204ENST00000506727 CUX1P39880 1505 aa16.19■□□□□ 0.18
PKD2-204ENST00000506727 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
PKD2-204ENST00000506727 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
PKD2-204ENST00000506727 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
PKD2-204ENST00000506727 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
PKD2-204ENST00000506727 PTPRMP28827 1452 aa16.11■□□□□ 0.17
PKD2-204ENST00000506727 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
PKD2-204ENST00000506727 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
PKD2-204ENST00000506727 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
PKD2-204ENST00000506727 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
PKD2-204ENST00000506727 ABCC2Q92887 1545 aa16.01■□□□□ 0.15
PKD2-204ENST00000506727 ADAMTSL3P82987 1691 aa16.01■□□□□ 0.15
PKD2-204ENST00000506727 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
PKD2-204ENST00000506727 KIF21BO75037 1637 aa16■□□□□ 0.15
PKD2-204ENST00000506727 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
PKD2-204ENST00000506727 HSPA2P54652 639 aa15.97■□□□□ 0.15
PKD2-204ENST00000506727 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
PKD2-204ENST00000506727 MSH5O43196 834 aa15.95■□□□□ 0.14
PKD2-204ENST00000506727 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
PKD2-204ENST00000506727 PTPRGP23470 1445 aa15.92■□□□□ 0.14
PKD2-204ENST00000506727 CUL7Q14999 1698 aa15.87■□□□□ 0.13
PKD2-204ENST00000506727 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
PKD2-204ENST00000506727 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
PKD2-204ENST00000506727 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
PKD2-204ENST00000506727 MADDQ8WXG6 1647 aa15.83■□□□□ 0.13
PKD2-204ENST00000506727 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
PKD2-204ENST00000506727 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
PKD2-204ENST00000506727 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
PKD2-204ENST00000506727 KCNA4P22459 653 aa15.78■□□□□ 0.12
PKD2-204ENST00000506727 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
PKD2-204ENST00000506727 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
PKD2-204ENST00000506727 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
PKD2-204ENST00000506727 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
PKD2-204ENST00000506727 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
PKD2-204ENST00000506727 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
PKD2-204ENST00000506727 IQSEC2Q5JU85 1478 aa15.74■□□□□ 0.11
PKD2-204ENST00000506727 YEATS2Q9ULM3 1422 aa15.72■□□□□ 0.11
PKD2-204ENST00000506727 RIMS1Q86UR5 1692 aaKnown RBP15.72■□□□□ 0.11
PKD2-204ENST00000506727 WDR7Q9Y4E6 1490 aa15.7■□□□□ 0.1
PKD2-204ENST00000506727 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
PKD2-204ENST00000506727 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
PKD2-204ENST00000506727 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
PKD2-204ENST00000506727 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
PKD2-204ENST00000506727 STRCQ7RTU9 1775 aa15.67■□□□□ 0.1
PKD2-204ENST00000506727 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
PKD2-204ENST00000506727 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
PKD2-204ENST00000506727 PTPRTO14522 1441 aa15.6■□□□□ 0.09
PKD2-204ENST00000506727 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
PKD2-204ENST00000506727 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
PKD2-204ENST00000506727 RAPGEF3O95398 923 aa15.58■□□□□ 0.08
PKD2-204ENST00000506727 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
PKD2-204ENST00000506727 PREX1Q8TCU6 1659 aa15.55■□□□□ 0.08
PKD2-204ENST00000506727 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
PKD2-204ENST00000506727 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
PKD2-204ENST00000506727 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
PKD2-204ENST00000506727 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
PKD2-204ENST00000506727 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
PKD2-204ENST00000506727 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
PKD2-204ENST00000506727 HSPA1LP34931 641 aa15.48■□□□□ 0.07
PKD2-204ENST00000506727 ARHGEF40Q8TER5 1519 aa15.48■□□□□ 0.07
PKD2-204ENST00000506727 IGF1RP08069 1367 aa15.46■□□□□ 0.07
PKD2-204ENST00000506727 FANCAO15360 1455 aa15.45■□□□□ 0.06
PKD2-204ENST00000506727 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
PKD2-204ENST00000506727 NEO1Q92859 1461 aa15.43■□□□□ 0.06
PKD2-204ENST00000506727 FER1L4A9Z1Z3 1794 aa15.42■□□□□ 0.06
PKD2-204ENST00000506727 UHRF1BP1Q6BDS2 1440 aa15.42■□□□□ 0.06
PKD2-204ENST00000506727 SIGLEC1Q9BZZ2 1709 aa15.39■□□□□ 0.05
PKD2-204ENST00000506727 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
PKD2-204ENST00000506727 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
PKD2-204ENST00000506727 AKNAQ7Z591 1439 aa15.37■□□□□ 0.05
PKD2-204ENST00000506727 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
PKD2-204ENST00000506727 MLECQ14165 292 aa15.36■□□□□ 0.05
PKD2-204ENST00000506727 SETD1BQ9UPS6 1966 aaKnown RBP15.36■□□□□ 0.05
PKD2-204ENST00000506727 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
PKD2-204ENST00000506727 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
PKD2-204ENST00000506727 UGGT2Q9NYU1 1516 aa15.33■□□□□ 0.05
PKD2-204ENST00000506727 RGS17Q9UGC6 210 aaPredicted RBP15.33■□□□□ 0.04
PKD2-204ENST00000506727 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms