RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CUL7Q14999 1698 aa15.73■□□□□ 0.11
PDLIM5-209ENST00000506632 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
PDLIM5-209ENST00000506632 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-209ENST00000506632 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
PDLIM5-209ENST00000506632 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
PDLIM5-209ENST00000506632 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
PDLIM5-209ENST00000506632 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-209ENST00000506632 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
PDLIM5-209ENST00000506632 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
PDLIM5-209ENST00000506632 ADCY10Q96PN6 1610 aa15.48■□□□□ 0.07
PDLIM5-209ENST00000506632 PRXQ9BXM0 1461 aa15.46■□□□□ 0.07
PDLIM5-209ENST00000506632 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
PDLIM5-209ENST00000506632 DISP1Q96F81 1524 aa15.45■□□□□ 0.06
PDLIM5-209ENST00000506632 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
PDLIM5-209ENST00000506632 PTPRGP23470 1445 aa15.44■□□□□ 0.06
PDLIM5-209ENST00000506632 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
PDLIM5-209ENST00000506632 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
PDLIM5-209ENST00000506632 KIF13AQ9H1H9 1805 aa15.42■□□□□ 0.06
PDLIM5-209ENST00000506632 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
PDLIM5-209ENST00000506632 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
PDLIM5-209ENST00000506632 KIAA0556O60303 1618 aa15.39■□□□□ 0.05
PDLIM5-209ENST00000506632 NPM1P06748 294 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDLIM5-209ENST00000506632 UHRF1BP1LA0JNW5 1464 aa15.37■□□□□ 0.05
PDLIM5-209ENST00000506632 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
PDLIM5-209ENST00000506632 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
PDLIM5-209ENST00000506632 EEA1Q15075 1411 aa15.34■□□□□ 0.05
PDLIM5-209ENST00000506632 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
PDLIM5-209ENST00000506632 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
PDLIM5-209ENST00000506632 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
PDLIM5-209ENST00000506632 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
PDLIM5-209ENST00000506632 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
PDLIM5-209ENST00000506632 KDM5BQ9UGL1 1544 aa15.3■□□□□ 0.04
PDLIM5-209ENST00000506632 ASXL2Q76L83 1435 aa15.27■□□□□ 0.04
PDLIM5-209ENST00000506632 PLB1Q6P1J6 1458 aa15.27■□□□□ 0.03
PDLIM5-209ENST00000506632 ZCCHC11Q5TAX3 1644 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-209ENST00000506632 ABCA8O94911 1581 aa15.24■□□□□ 0.03
PDLIM5-209ENST00000506632 GLI2P10070 1586 aa15.24■□□□□ 0.03
PDLIM5-209ENST00000506632 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
PDLIM5-209ENST00000506632 KIF21BO75037 1637 aa15.21■□□□□ 0.03
PDLIM5-209ENST00000506632 EPRSP07814 1512 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-209ENST00000506632 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-209ENST00000506632 TSPOAP1O95153 1857 aa15.18■□□□□ 0.02
PDLIM5-209ENST00000506632 PPRC1Q5VV67 1664 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-209ENST00000506632 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
PDLIM5-209ENST00000506632 MAP3K4Q9Y6R4 1608 aa15.15■□□□□ 0.02
PDLIM5-209ENST00000506632 KDM6BO15054 1643 aa15.14■□□□□ 0.01
PDLIM5-209ENST00000506632 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
PDLIM5-209ENST00000506632 ATP10BO94823 1461 aa15.1■□□□□ 0.01
PDLIM5-209ENST00000506632 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
PDLIM5-209ENST00000506632 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
PDLIM5-209ENST00000506632 FHOD3Q2V2M9 1422 aa15.09■□□□□ 0.01
PDLIM5-209ENST00000506632 TEX14Q8IWB6 1497 aa15.07■□□□□ 0
PDLIM5-209ENST00000506632 CFAP43Q8NDM7 1665 aa15.06■□□□□ 0
PDLIM5-209ENST00000506632 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
PDLIM5-209ENST00000506632 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ -0
PDLIM5-209ENST00000506632 MAGI3Q5TCQ9 1506 aa15.05■□□□□ -0
PDLIM5-209ENST00000506632 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
PDLIM5-209ENST00000506632 CD109Q6YHK3 1445 aa15.02■□□□□ -0
PDLIM5-209ENST00000506632 ARID3CA6NKF2 412 aa15.02■□□□□ -0
PDLIM5-209ENST00000506632 KCNH8Q96L42 1107 aa15.02■□□□□ -0
PDLIM5-209ENST00000506632 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-209ENST00000506632 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
PDLIM5-209ENST00000506632 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
PDLIM5-209ENST00000506632 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
PDLIM5-209ENST00000506632 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
PDLIM5-209ENST00000506632 ARAP3Q8WWN8 1544 aa14.92□□□□□ -0.02
PDLIM5-209ENST00000506632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-209ENST00000506632 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-209ENST00000506632 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-209ENST00000506632 KDM4FA0A1W2PPD8 638 aa14.91□□□□□ -0.02
PDLIM5-209ENST00000506632 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
PDLIM5-209ENST00000506632 HECW1Q76N89 1606 aa14.91□□□□□ -0.02
PDLIM5-209ENST00000506632 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
PDLIM5-209ENST00000506632 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
PDLIM5-209ENST00000506632 NEO1Q92859 1461 aa14.89□□□□□ -0.03
PDLIM5-209ENST00000506632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.03
PDLIM5-209ENST00000506632 TTC37Q6PGP7 1564 aa14.85□□□□□ -0.03
PDLIM5-209ENST00000506632 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.03
PDLIM5-209ENST00000506632 ADGRL1O94910 1474 aa14.83□□□□□ -0.03
PDLIM5-209ENST00000506632 FRMPD1Q5SYB0 1578 aa14.82□□□□□ -0.04
PDLIM5-209ENST00000506632 CASKIN1Q8WXD9 1431 aa14.82□□□□□ -0.04
PDLIM5-209ENST00000506632 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
PDLIM5-209ENST00000506632 CFAP74Q9C0B2 1584 aa14.81□□□□□ -0.04
PDLIM5-209ENST00000506632 CLIP1P30622 1438 aa14.8□□□□□ -0.04
PDLIM5-209ENST00000506632 FANCAO15360 1455 aa14.8□□□□□ -0.04
PDLIM5-209ENST00000506632 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-209ENST00000506632 AKNAQ7Z591 1439 aa14.79□□□□□ -0.04
PDLIM5-209ENST00000506632 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-209ENST00000506632 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-209ENST00000506632 PLCH2O75038 1416 aa14.78□□□□□ -0.04
PDLIM5-209ENST00000506632 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
PDLIM5-209ENST00000506632 KIF14Q15058 1648 aa14.77□□□□□ -0.04
PDLIM5-209ENST00000506632 RICTORQ6R327 1708 aa14.77□□□□□ -0.05
PDLIM5-209ENST00000506632 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-209ENST00000506632 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
PDLIM5-209ENST00000506632 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
PDLIM5-209ENST00000506632 MYO5CQ9NQX4 1742 aa14.74□□□□□ -0.05
PDLIM5-209ENST00000506632 ZMYM4Q5VZL5 1548 aa14.73□□□□□ -0.05
PDLIM5-209ENST00000506632 ARHGEF40Q8TER5 1519 aa14.72□□□□□ -0.05
PDLIM5-209ENST00000506632 POGZQ7Z3K3 1410 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms