RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
LIN54-206ENST00000506560 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
LIN54-206ENST00000506560 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
LIN54-206ENST00000506560 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
LIN54-206ENST00000506560 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
LIN54-206ENST00000506560 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
LIN54-206ENST00000506560 CCER1Q8TC90 406 aaPredicted RBP18.6■□□□□ 0.57
LIN54-206ENST00000506560 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
LIN54-206ENST00000506560 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.56
LIN54-206ENST00000506560 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
LIN54-206ENST00000506560 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
LIN54-206ENST00000506560 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
LIN54-206ENST00000506560 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
LIN54-206ENST00000506560 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
LIN54-206ENST00000506560 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
LIN54-206ENST00000506560 EFCAB5A4FU69 1503 aa18.52■□□□□ 0.56
LIN54-206ENST00000506560 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
LIN54-206ENST00000506560 SAMD9Q5K651 1589 aa18.49■□□□□ 0.55
LIN54-206ENST00000506560 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
LIN54-206ENST00000506560 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
LIN54-206ENST00000506560 RRBP1Q9P2E9 1410 aaKnown RBP18.43■□□□□ 0.54
LIN54-206ENST00000506560 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
LIN54-206ENST00000506560 ITGAEP38570 1179 aa18.42■□□□□ 0.54
LIN54-206ENST00000506560 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
LIN54-206ENST00000506560 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
LIN54-206ENST00000506560 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
LIN54-206ENST00000506560 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
LIN54-206ENST00000506560 FMN1Q68DA7 1419 aa18.41■□□□□ 0.54
LIN54-206ENST00000506560 FBLN2P98095 1184 aa18.41■□□□□ 0.54
LIN54-206ENST00000506560 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
LIN54-206ENST00000506560 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
LIN54-206ENST00000506560 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
LIN54-206ENST00000506560 ARID3CA6NKF2 412 aa18.36■□□□□ 0.53
LIN54-206ENST00000506560 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
LIN54-206ENST00000506560 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
LIN54-206ENST00000506560 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
LIN54-206ENST00000506560 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
LIN54-206ENST00000506560 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
LIN54-206ENST00000506560 UGGT2Q9NYU1 1516 aa18.3■□□□□ 0.52
LIN54-206ENST00000506560 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
LIN54-206ENST00000506560 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
LIN54-206ENST00000506560 MTUS2Q5JR59 1369 aa18.28■□□□□ 0.52
LIN54-206ENST00000506560 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
LIN54-206ENST00000506560 KIAA0556O60303 1618 aa18.25■□□□□ 0.51
LIN54-206ENST00000506560 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
LIN54-206ENST00000506560 NUP160Q12769 1436 aa18.21■□□□□ 0.51
LIN54-206ENST00000506560 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
LIN54-206ENST00000506560 EPRSP07814 1512 aaKnown RBP18.2■□□□□ 0.5
LIN54-206ENST00000506560 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
LIN54-206ENST00000506560 HECW1Q76N89 1606 aa18.19■□□□□ 0.5
LIN54-206ENST00000506560 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
LIN54-206ENST00000506560 FGD6Q6ZV73 1430 aa18.17■□□□□ 0.5
LIN54-206ENST00000506560 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
LIN54-206ENST00000506560 EHBP1L1Q8N3D4 1523 aa18.14■□□□□ 0.49
LIN54-206ENST00000506560 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
LIN54-206ENST00000506560 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
LIN54-206ENST00000506560 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
LIN54-206ENST00000506560 SUPT6HQ7KZ85 1726 aaKnown RBP18.12■□□□□ 0.49
LIN54-206ENST00000506560 PTPRKQ15262 1439 aa18.11■□□□□ 0.49
LIN54-206ENST00000506560 MYOM3Q5VTT5 1437 aa18.11■□□□□ 0.49
LIN54-206ENST00000506560 CHD1O14646 1710 aa18.1■□□□□ 0.49
LIN54-206ENST00000506560 RAPGEF6Q8TEU7 1601 aa18.1■□□□□ 0.49
LIN54-206ENST00000506560 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
LIN54-206ENST00000506560 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
LIN54-206ENST00000506560 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
LIN54-206ENST00000506560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
LIN54-206ENST00000506560 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
LIN54-206ENST00000506560 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
LIN54-206ENST00000506560 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
LIN54-206ENST00000506560 MAPKBP1O60336 1514 aa18■□□□□ 0.47
LIN54-206ENST00000506560 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
LIN54-206ENST00000506560 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
LIN54-206ENST00000506560 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
LIN54-206ENST00000506560 RRP7BPQ9NSQ0 103 aa17.96■□□□□ 0.46
LIN54-206ENST00000506560 ABCA8O94911 1581 aa17.95■□□□□ 0.46
LIN54-206ENST00000506560 KIF14Q15058 1648 aa17.94■□□□□ 0.46
LIN54-206ENST00000506560 TCOF1Q13428 1488 aaKnown RBP17.94■□□□□ 0.46
LIN54-206ENST00000506560 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
LIN54-206ENST00000506560 PTPRGP23470 1445 aa17.92■□□□□ 0.46
LIN54-206ENST00000506560 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
LIN54-206ENST00000506560 NAIPQ13075 1403 aa17.92■□□□□ 0.46
LIN54-206ENST00000506560 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
LIN54-206ENST00000506560 ATP10BO94823 1461 aa17.92■□□□□ 0.46
LIN54-206ENST00000506560 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
LIN54-206ENST00000506560 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
LIN54-206ENST00000506560 MIA2Q96PC5 1412 aa17.9■□□□□ 0.46
LIN54-206ENST00000506560 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
LIN54-206ENST00000506560 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
LIN54-206ENST00000506560 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
LIN54-206ENST00000506560 KDM6BO15054 1643 aa17.86■□□□□ 0.45
LIN54-206ENST00000506560 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
LIN54-206ENST00000506560 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
LIN54-206ENST00000506560 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
LIN54-206ENST00000506560 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
LIN54-206ENST00000506560 ABCC5O15440 1437 aa17.83■□□□□ 0.44
LIN54-206ENST00000506560 DAPK1P53355 1430 aa17.82■□□□□ 0.44
LIN54-206ENST00000506560 CLASP1Q7Z460 1538 aa17.81■□□□□ 0.44
LIN54-206ENST00000506560 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
LIN54-206ENST00000506560 CAMSAP2Q08AD1 1489 aa17.8■□□□□ 0.44
LIN54-206ENST00000506560 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms