RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
COPS4-204ENST00000506443 NUP160Q12769 1436 aa16.65■□□□□ 0.26
COPS4-204ENST00000506443 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
COPS4-204ENST00000506443 DIP2BQ9P265 1576 aa16.52■□□□□ 0.24
COPS4-204ENST00000506443 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
COPS4-204ENST00000506443 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
COPS4-204ENST00000506443 ADCY10Q96PN6 1610 aa16.5■□□□□ 0.23
COPS4-204ENST00000506443 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
COPS4-204ENST00000506443 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
COPS4-204ENST00000506443 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
COPS4-204ENST00000506443 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
COPS4-204ENST00000506443 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
COPS4-204ENST00000506443 KDM6BO15054 1643 aa16.45■□□□□ 0.22
COPS4-204ENST00000506443 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
COPS4-204ENST00000506443 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
COPS4-204ENST00000506443 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
COPS4-204ENST00000506443 FAM69CQ0P6D2 419 aa16.41■□□□□ 0.22
COPS4-204ENST00000506443 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
COPS4-204ENST00000506443 PPRC1Q5VV67 1664 aaKnown RBP16.34■□□□□ 0.21
COPS4-204ENST00000506443 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
COPS4-204ENST00000506443 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
COPS4-204ENST00000506443 ADGRL1O94910 1474 aa16.26■□□□□ 0.19
COPS4-204ENST00000506443 CUL7Q14999 1698 aa16.24■□□□□ 0.19
COPS4-204ENST00000506443 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
COPS4-204ENST00000506443 HECW2Q9P2P5 1572 aa16.22■□□□□ 0.19
COPS4-204ENST00000506443 COL17A1Q9UMD9 1497 aaPredicted RBP16.21■□□□□ 0.19
COPS4-204ENST00000506443 ABCC2Q92887 1545 aa16.2■□□□□ 0.18
COPS4-204ENST00000506443 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
COPS4-204ENST00000506443 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
COPS4-204ENST00000506443 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
COPS4-204ENST00000506443 GLI2P10070 1586 aa16.13■□□□□ 0.17
COPS4-204ENST00000506443 IGF1RP08069 1367 aa16.13■□□□□ 0.17
COPS4-204ENST00000506443 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
COPS4-204ENST00000506443 PTPRGP23470 1445 aa16.11■□□□□ 0.17
COPS4-204ENST00000506443 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
COPS4-204ENST00000506443 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
COPS4-204ENST00000506443 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
COPS4-204ENST00000506443 DISP1Q96F81 1524 aa16.07■□□□□ 0.16
COPS4-204ENST00000506443 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
COPS4-204ENST00000506443 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
COPS4-204ENST00000506443 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
COPS4-204ENST00000506443 UHRF1BP1LA0JNW5 1464 aa16.03■□□□□ 0.16
COPS4-204ENST00000506443 KIF21BO75037 1637 aa16.01■□□□□ 0.15
COPS4-204ENST00000506443 UACAQ9BZF9 1416 aa16.01■□□□□ 0.15
COPS4-204ENST00000506443 KDM5BQ9UGL1 1544 aa16■□□□□ 0.15
COPS4-204ENST00000506443 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
COPS4-204ENST00000506443 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
COPS4-204ENST00000506443 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
COPS4-204ENST00000506443 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
COPS4-204ENST00000506443 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
COPS4-204ENST00000506443 WDR7Q9Y4E6 1490 aa15.92■□□□□ 0.14
COPS4-204ENST00000506443 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
COPS4-204ENST00000506443 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
COPS4-204ENST00000506443 ABCA8O94911 1581 aa15.84■□□□□ 0.13
COPS4-204ENST00000506443 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
COPS4-204ENST00000506443 CD109Q6YHK3 1445 aa15.82■□□□□ 0.12
COPS4-204ENST00000506443 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
COPS4-204ENST00000506443 ADAMTSL3P82987 1691 aa15.81■□□□□ 0.12
COPS4-204ENST00000506443 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
COPS4-204ENST00000506443 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
COPS4-204ENST00000506443 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
COPS4-204ENST00000506443 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
COPS4-204ENST00000506443 PTPRMP28827 1452 aa15.78■□□□□ 0.12
COPS4-204ENST00000506443 FBXO41Q8TF61 875 aa15.75■□□□□ 0.11
COPS4-204ENST00000506443 BCORL1Q5H9F3 1711 aa15.74■□□□□ 0.11
COPS4-204ENST00000506443 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
COPS4-204ENST00000506443 LMTK3Q96Q04 1460 aa15.72■□□□□ 0.11
COPS4-204ENST00000506443 SIGLEC1Q9BZZ2 1709 aa15.72■□□□□ 0.11
COPS4-204ENST00000506443 ARAP3Q8WWN8 1544 aa15.72■□□□□ 0.11
COPS4-204ENST00000506443 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
COPS4-204ENST00000506443 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
COPS4-204ENST00000506443 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
COPS4-204ENST00000506443 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
COPS4-204ENST00000506443 ATP10BO94823 1461 aa15.65■□□□□ 0.1
COPS4-204ENST00000506443 ARHGEF40Q8TER5 1519 aa15.65■□□□□ 0.1
COPS4-204ENST00000506443 GOLGA3Q08378 1498 aa15.65■□□□□ 0.1
COPS4-204ENST00000506443 HSPA2P54652 639 aa15.62■□□□□ 0.09
COPS4-204ENST00000506443 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
COPS4-204ENST00000506443 RICTORQ6R327 1708 aa15.61■□□□□ 0.09
COPS4-204ENST00000506443 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
COPS4-204ENST00000506443 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
COPS4-204ENST00000506443 SAMD9Q5K651 1589 aa15.58■□□□□ 0.09
COPS4-204ENST00000506443 NEO1Q92859 1461 aa15.56■□□□□ 0.08
COPS4-204ENST00000506443 TTC37Q6PGP7 1564 aa15.55■□□□□ 0.08
COPS4-204ENST00000506443 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
COPS4-204ENST00000506443 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
COPS4-204ENST00000506443 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
COPS4-204ENST00000506443 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
COPS4-204ENST00000506443 YEATS2Q9ULM3 1422 aa15.53■□□□□ 0.08
COPS4-204ENST00000506443 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
COPS4-204ENST00000506443 ILDR2Q71H61 639 aa15.51■□□□□ 0.07
COPS4-204ENST00000506443 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
COPS4-204ENST00000506443 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
COPS4-204ENST00000506443 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
COPS4-204ENST00000506443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
COPS4-204ENST00000506443 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
COPS4-204ENST00000506443 DENND4BO75064 1496 aaPredicted RBP15.46■□□□□ 0.07
COPS4-204ENST00000506443 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
COPS4-204ENST00000506443 FANCAO15360 1455 aa15.45■□□□□ 0.06
COPS4-204ENST00000506443 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms