RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
AP3S1-204ENST00000506430 CUL7Q14999 1698 aa29.79■■■□□ 2.36
AP3S1-204ENST00000506430 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
AP3S1-204ENST00000506430 KIAA0586Q9BVV6 1533 aa29.73■■■□□ 2.35
AP3S1-204ENST00000506430 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
AP3S1-204ENST00000506430 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
AP3S1-204ENST00000506430 NPM1P06748 294 aaKnown RBP eCLIP29.46■■■□□ 2.31
AP3S1-204ENST00000506430 IQGAP2Q13576 1575 aa29.45■■■□□ 2.31
AP3S1-204ENST00000506430 ADCY10Q96PN6 1610 aa29.45■■■□□ 2.3
AP3S1-204ENST00000506430 PTPRGP23470 1445 aa29.44■■■□□ 2.3
AP3S1-204ENST00000506430 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
AP3S1-204ENST00000506430 TNIKQ9UKE5 1360 aa29.39■■■□□ 2.3
AP3S1-204ENST00000506430 DISP1Q96F81 1524 aa29.35■■■□□ 2.29
AP3S1-204ENST00000506430 FAM69CQ0P6D2 419 aa29.34■■■□□ 2.29
AP3S1-204ENST00000506430 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
AP3S1-204ENST00000506430 MAPKBP1O60336 1514 aa29.33■■■□□ 2.29
AP3S1-204ENST00000506430 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
AP3S1-204ENST00000506430 UGGT2Q9NYU1 1516 aa29.3■■■□□ 2.28
AP3S1-204ENST00000506430 PRXQ9BXM0 1461 aa29.28■■■□□ 2.28
AP3S1-204ENST00000506430 DIP2BQ9P265 1576 aa29.21■■■□□ 2.27
AP3S1-204ENST00000506430 UACAQ9BZF9 1416 aa29.2■■■□□ 2.27
AP3S1-204ENST00000506430 ABCC2Q92887 1545 aa29.2■■■□□ 2.27
AP3S1-204ENST00000506430 KIAA0556O60303 1618 aa29.19■■■□□ 2.26
AP3S1-204ENST00000506430 UHRF1BP1LA0JNW5 1464 aa29.18■■■□□ 2.26
AP3S1-204ENST00000506430 CSRNP3Q8WYN3 585 aa29.17■■■□□ 2.26
AP3S1-204ENST00000506430 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
AP3S1-204ENST00000506430 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
AP3S1-204ENST00000506430 GOLGA3Q08378 1498 aa29.06■■■□□ 2.24
AP3S1-204ENST00000506430 KDM5BQ9UGL1 1544 aa29.05■■■□□ 2.24
AP3S1-204ENST00000506430 PLB1Q6P1J6 1458 aa29.05■■■□□ 2.24
AP3S1-204ENST00000506430 FAM9AQ8IZU1 332 aaPredicted RBP29.04■■■□□ 2.24
AP3S1-204ENST00000506430 TSPOAP1O95153 1857 aa29■■■□□ 2.23
AP3S1-204ENST00000506430 EEA1Q15075 1411 aa28.99■■■□□ 2.23
AP3S1-204ENST00000506430 P3H3Q8IVL6 736 aa28.98■■■□□ 2.23
AP3S1-204ENST00000506430 ZCCHC11Q5TAX3 1644 aaKnown RBP28.97■■■□□ 2.23
AP3S1-204ENST00000506430 GLI2P10070 1586 aa28.94■■■□□ 2.22
AP3S1-204ENST00000506430 EPRSP07814 1512 aaKnown RBP28.92■■■□□ 2.22
AP3S1-204ENST00000506430 ABCA8O94911 1581 aa28.92■■■□□ 2.22
AP3S1-204ENST00000506430 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
AP3S1-204ENST00000506430 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
AP3S1-204ENST00000506430 KDM6BO15054 1643 aa28.87■■■□□ 2.21
AP3S1-204ENST00000506430 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
AP3S1-204ENST00000506430 WDR7Q9Y4E6 1490 aa28.85■■■□□ 2.21
AP3S1-204ENST00000506430 PPRC1Q5VV67 1664 aaKnown RBP28.83■■■□□ 2.21
AP3S1-204ENST00000506430 ARID3CA6NKF2 412 aa28.82■■■□□ 2.2
AP3S1-204ENST00000506430 SAMD9Q5K651 1589 aa28.81■■■□□ 2.2
AP3S1-204ENST00000506430 KCNH8Q96L42 1107 aa28.81■■■□□ 2.2
AP3S1-204ENST00000506430 MAP3K4Q9Y6R4 1608 aa28.79■■■□□ 2.2
AP3S1-204ENST00000506430 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
AP3S1-204ENST00000506430 ATP10BO94823 1461 aa28.73■■■□□ 2.19
AP3S1-204ENST00000506430 KIF21BO75037 1637 aa28.73■■■□□ 2.19
AP3S1-204ENST00000506430 COL17A1Q9UMD9 1497 aaPredicted RBP28.72■■■□□ 2.19
AP3S1-204ENST00000506430 FHOD3Q2V2M9 1422 aa28.69■■■□□ 2.18
AP3S1-204ENST00000506430 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
AP3S1-204ENST00000506430 CD109Q6YHK3 1445 aa28.67■■■□□ 2.18
AP3S1-204ENST00000506430 UBTFP17480 764 aaKnown RBP28.64■■■□□ 2.18
AP3S1-204ENST00000506430 RAPGEF6Q8TEU7 1601 aa28.64■■■□□ 2.18
AP3S1-204ENST00000506430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
AP3S1-204ENST00000506430 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
AP3S1-204ENST00000506430 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
AP3S1-204ENST00000506430 NUP153P49790 1475 aaKnown RBP28.59■■■□□ 2.17
AP3S1-204ENST00000506430 MAGI3Q5TCQ9 1506 aa28.59■■■□□ 2.17
AP3S1-204ENST00000506430 CFAP43Q8NDM7 1665 aa28.58■■■□□ 2.17
AP3S1-204ENST00000506430 EFCAB5A4FU69 1503 aa28.55■■■□□ 2.16
AP3S1-204ENST00000506430 ABCA9Q8IUA7 1624 aa28.45■■■□□ 2.14
AP3S1-204ENST00000506430 PLEKHD1A6NEE1 506 aa28.45■■■□□ 2.14
AP3S1-204ENST00000506430 ARHGAP35Q9NRY4 1499 aa28.42■■■□□ 2.14
AP3S1-204ENST00000506430 ARAP3Q8WWN8 1544 aa28.38■■■□□ 2.13
AP3S1-204ENST00000506430 ATP1B4Q9UN42 357 aaPredicted RBP28.37■■■□□ 2.13
AP3S1-204ENST00000506430 ADGRL1O94910 1474 aa28.36■■■□□ 2.13
AP3S1-204ENST00000506430 CDK13Q14004 1512 aaKnown RBP28.34■■■□□ 2.13
AP3S1-204ENST00000506430 FMN1Q68DA7 1419 aa28.34■■■□□ 2.13
AP3S1-204ENST00000506430 PHLDB1Q86UU1 1377 aa28.33■■■□□ 2.13
AP3S1-204ENST00000506430 RAPGEF3O95398 923 aa28.31■■■□□ 2.12
AP3S1-204ENST00000506430 NEO1Q92859 1461 aa28.29■■■□□ 2.12
AP3S1-204ENST00000506430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.27■■■□□ 2.12
AP3S1-204ENST00000506430 HECW1Q76N89 1606 aa28.22■■■□□ 2.11
AP3S1-204ENST00000506430 TTC37Q6PGP7 1564 aa28.21■■■□□ 2.11
AP3S1-204ENST00000506430 FANCAO15360 1455 aa28.18■■■□□ 2.1
AP3S1-204ENST00000506430 AKNAQ7Z591 1439 aa28.18■■■□□ 2.1
AP3S1-204ENST00000506430 CDK11AQ9UQ88 783 aaPredicted RBP28.17■■■□□ 2.1
AP3S1-204ENST00000506430 FRMPD1Q5SYB0 1578 aa28.15■■■□□ 2.1
AP3S1-204ENST00000506430 PLCH2O75038 1416 aa28.11■■■□□ 2.09
AP3S1-204ENST00000506430 DENND4BO75064 1496 aaPredicted RBP28.11■■■□□ 2.09
AP3S1-204ENST00000506430 LRRIQ1Q96JM4 1722 aa28.09■■■□□ 2.09
AP3S1-204ENST00000506430 CASKIN1Q8WXD9 1431 aa28.09■■■□□ 2.09
AP3S1-204ENST00000506430 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
AP3S1-204ENST00000506430 CLIP1P30622 1438 aa28.07■■■□□ 2.08
AP3S1-204ENST00000506430 CFAP74Q9C0B2 1584 aa28.06■■■□□ 2.08
AP3S1-204ENST00000506430 KIF14Q15058 1648 aa28.06■■■□□ 2.08
AP3S1-204ENST00000506430 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
AP3S1-204ENST00000506430 RICTORQ6R327 1708 aa28.04■■■□□ 2.08
AP3S1-204ENST00000506430 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
AP3S1-204ENST00000506430 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.08
AP3S1-204ENST00000506430 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
AP3S1-204ENST00000506430 CCDC18Q5T9S5 1454 aa27.98■■■□□ 2.07
AP3S1-204ENST00000506430 MYO5CQ9NQX4 1742 aa27.95■■■□□ 2.07
AP3S1-204ENST00000506430 YEATS2Q9ULM3 1422 aa27.95■■■□□ 2.07
AP3S1-204ENST00000506430 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.06
AP3S1-204ENST00000506430 POGZQ7Z3K3 1410 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms