RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 CLASP1Q7Z460 1538 aa21.68■■□□□ 1.06
RCN1-202ENST00000506388 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
RCN1-202ENST00000506388 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
RCN1-202ENST00000506388 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
RCN1-202ENST00000506388 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
RCN1-202ENST00000506388 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
RCN1-202ENST00000506388 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
RCN1-202ENST00000506388 EFCAB5A4FU69 1503 aa21.54■■□□□ 1.04
RCN1-202ENST00000506388 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
RCN1-202ENST00000506388 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
RCN1-202ENST00000506388 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
RCN1-202ENST00000506388 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
RCN1-202ENST00000506388 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
RCN1-202ENST00000506388 CLIP1P30622 1438 aa21.47■■□□□ 1.03
RCN1-202ENST00000506388 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
RCN1-202ENST00000506388 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
RCN1-202ENST00000506388 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
RCN1-202ENST00000506388 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
RCN1-202ENST00000506388 ERCC6L2Q5T890 1561 aa21.35■■□□□ 1.01
RCN1-202ENST00000506388 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
RCN1-202ENST00000506388 ARHGEF11O15085 1522 aa21.31■■□□□ 1
RCN1-202ENST00000506388 FMN1Q68DA7 1419 aa21.3■■□□□ 1
RCN1-202ENST00000506388 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
RCN1-202ENST00000506388 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
RCN1-202ENST00000506388 PTPRGP23470 1445 aa21.26■□□□□ 0.99
RCN1-202ENST00000506388 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
RCN1-202ENST00000506388 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
RCN1-202ENST00000506388 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
RCN1-202ENST00000506388 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
RCN1-202ENST00000506388 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
RCN1-202ENST00000506388 ABCA8O94911 1581 aa21.2■□□□□ 0.98
RCN1-202ENST00000506388 CASKIN1Q8WXD9 1431 aa21.19■□□□□ 0.98
RCN1-202ENST00000506388 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
RCN1-202ENST00000506388 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
RCN1-202ENST00000506388 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
RCN1-202ENST00000506388 RAPGEF6Q8TEU7 1601 aa21.17■□□□□ 0.98
RCN1-202ENST00000506388 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
RCN1-202ENST00000506388 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
RCN1-202ENST00000506388 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
RCN1-202ENST00000506388 HECW1Q76N89 1606 aa21.13■□□□□ 0.97
RCN1-202ENST00000506388 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
RCN1-202ENST00000506388 NUP153P49790 1475 aaKnown RBP21.09■□□□□ 0.97
RCN1-202ENST00000506388 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
RCN1-202ENST00000506388 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.96
RCN1-202ENST00000506388 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
RCN1-202ENST00000506388 LRRIQ1Q96JM4 1722 aa21.05■□□□□ 0.96
RCN1-202ENST00000506388 KDM5BQ9UGL1 1544 aa21.05■□□□□ 0.96
RCN1-202ENST00000506388 EPRSP07814 1512 aaKnown RBP21.05■□□□□ 0.96
RCN1-202ENST00000506388 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
RCN1-202ENST00000506388 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
RCN1-202ENST00000506388 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
RCN1-202ENST00000506388 ATP10BO94823 1461 aa21■□□□□ 0.95
RCN1-202ENST00000506388 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
RCN1-202ENST00000506388 ZCCHC11Q5TAX3 1644 aaKnown RBP20.97■□□□□ 0.95
RCN1-202ENST00000506388 CDK13Q14004 1512 aaKnown RBP20.93■□□□□ 0.94
RCN1-202ENST00000506388 APLP2Q06481 763 aa20.92■□□□□ 0.94
RCN1-202ENST00000506388 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
RCN1-202ENST00000506388 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
RCN1-202ENST00000506388 MAPKBP1O60336 1514 aa20.9■□□□□ 0.94
RCN1-202ENST00000506388 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
RCN1-202ENST00000506388 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
RCN1-202ENST00000506388 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
RCN1-202ENST00000506388 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
RCN1-202ENST00000506388 TROQ12816 1431 aaPredicted RBP20.85■□□□□ 0.93
RCN1-202ENST00000506388 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
RCN1-202ENST00000506388 WDR7Q9Y4E6 1490 aa20.82■□□□□ 0.92
RCN1-202ENST00000506388 MTUS2Q5JR59 1369 aa20.82■□□□□ 0.92
RCN1-202ENST00000506388 ASXL2Q76L83 1435 aa20.81■□□□□ 0.92
RCN1-202ENST00000506388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
RCN1-202ENST00000506388 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
RCN1-202ENST00000506388 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
RCN1-202ENST00000506388 KANK4Q5T7N3 995 aaPredicted RBP20.8■□□□□ 0.92
RCN1-202ENST00000506388 SUPT6HQ7KZ85 1726 aaKnown RBP20.78■□□□□ 0.92
RCN1-202ENST00000506388 KIF14Q15058 1648 aa20.76■□□□□ 0.91
RCN1-202ENST00000506388 GLI2P10070 1586 aa20.72■□□□□ 0.91
RCN1-202ENST00000506388 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
RCN1-202ENST00000506388 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
RCN1-202ENST00000506388 ABCC10Q5T3U5 1492 aa20.71■□□□□ 0.91
RCN1-202ENST00000506388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
RCN1-202ENST00000506388 DIP2BQ9P265 1576 aa20.67■□□□□ 0.9
RCN1-202ENST00000506388 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
RCN1-202ENST00000506388 TTC37Q6PGP7 1564 aa20.64■□□□□ 0.9
RCN1-202ENST00000506388 ITSN2Q9NZM3 1697 aa20.64■□□□□ 0.89
RCN1-202ENST00000506388 CDC42BPAQ5VT25 1732 aa20.64■□□□□ 0.89
RCN1-202ENST00000506388 MYO5CQ9NQX4 1742 aa20.63■□□□□ 0.89
RCN1-202ENST00000506388 KIF13AQ9H1H9 1805 aa20.62■□□□□ 0.89
RCN1-202ENST00000506388 MAP3K4Q9Y6R4 1608 aa20.62■□□□□ 0.89
RCN1-202ENST00000506388 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
RCN1-202ENST00000506388 GPATCH8Q9UKJ3 1502 aaKnown RBP20.62■□□□□ 0.89
RCN1-202ENST00000506388 MYOM3Q5VTT5 1437 aa20.62■□□□□ 0.89
RCN1-202ENST00000506388 PREX2Q70Z35 1606 aa20.61■□□□□ 0.89
RCN1-202ENST00000506388 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
RCN1-202ENST00000506388 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
RCN1-202ENST00000506388 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
RCN1-202ENST00000506388 PLCH2O75038 1416 aa20.59■□□□□ 0.89
RCN1-202ENST00000506388 CDC42BPBQ9Y5S2 1711 aa20.59■□□□□ 0.89
RCN1-202ENST00000506388 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
RCN1-202ENST00000506388 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
RCN1-202ENST00000506388 CD109Q6YHK3 1445 aa20.54■□□□□ 0.88
RCN1-202ENST00000506388 FGD6Q6ZV73 1430 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms