RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 PKD2Q13563 968 aa12.53□□□□□ -0.4
SMAD5-201ENST00000506223 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
SMAD5-201ENST00000506223 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
SMAD5-201ENST00000506223 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
SMAD5-201ENST00000506223 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
SMAD5-201ENST00000506223 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
SMAD5-201ENST00000506223 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
SMAD5-201ENST00000506223 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
SMAD5-201ENST00000506223 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
SMAD5-201ENST00000506223 SMARCA4P51532 1647 aa12.43□□□□□ -0.42
SMAD5-201ENST00000506223 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
SMAD5-201ENST00000506223 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
SMAD5-201ENST00000506223 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
SMAD5-201ENST00000506223 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
SMAD5-201ENST00000506223 WDR62O43379 1518 aa12.33□□□□□ -0.44
SMAD5-201ENST00000506223 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.44
SMAD5-201ENST00000506223 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
SMAD5-201ENST00000506223 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
SMAD5-201ENST00000506223 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
SMAD5-201ENST00000506223 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
SMAD5-201ENST00000506223 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
SMAD5-201ENST00000506223 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
SMAD5-201ENST00000506223 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
SMAD5-201ENST00000506223 RGL2O15211 777 aa12.25□□□□□ -0.45
SMAD5-201ENST00000506223 NUBP1P53384 320 aa12.24□□□□□ -0.45
SMAD5-201ENST00000506223 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
SMAD5-201ENST00000506223 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
SMAD5-201ENST00000506223 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
SMAD5-201ENST00000506223 GSE1Q14687 1217 aa12.21□□□□□ -0.45
SMAD5-201ENST00000506223 ARHGEF11O15085 1522 aa12.19□□□□□ -0.46
SMAD5-201ENST00000506223 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
SMAD5-201ENST00000506223 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
SMAD5-201ENST00000506223 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
SMAD5-201ENST00000506223 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMAD5-201ENST00000506223 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
SMAD5-201ENST00000506223 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
SMAD5-201ENST00000506223 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
SMAD5-201ENST00000506223 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
SMAD5-201ENST00000506223 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SMAD5-201ENST00000506223 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
SMAD5-201ENST00000506223 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
SMAD5-201ENST00000506223 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
SMAD5-201ENST00000506223 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
SMAD5-201ENST00000506223 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
SMAD5-201ENST00000506223 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
SMAD5-201ENST00000506223 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
SMAD5-201ENST00000506223 ZNF608Q9ULD9 1512 aaPredicted RBP12.02□□□□□ -0.48
SMAD5-201ENST00000506223 WIZO95785 1651 aa12.01□□□□□ -0.49
SMAD5-201ENST00000506223 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
SMAD5-201ENST00000506223 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
SMAD5-201ENST00000506223 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
SMAD5-201ENST00000506223 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
SMAD5-201ENST00000506223 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
SMAD5-201ENST00000506223 HS6ST3Q8IZP7 471 aa11.99□□□□□ -0.49
SMAD5-201ENST00000506223 CHD1O14646 1710 aa11.99□□□□□ -0.49
SMAD5-201ENST00000506223 CFTRP13569 1480 aa11.98□□□□□ -0.49
SMAD5-201ENST00000506223 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMAD5-201ENST00000506223 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
SMAD5-201ENST00000506223 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
SMAD5-201ENST00000506223 PYGBP11216 843 aa11.96□□□□□ -0.49
SMAD5-201ENST00000506223 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
SMAD5-201ENST00000506223 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
SMAD5-201ENST00000506223 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
SMAD5-201ENST00000506223 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
SMAD5-201ENST00000506223 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
SMAD5-201ENST00000506223 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
SMAD5-201ENST00000506223 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
SMAD5-201ENST00000506223 RSF1Q96T23 1441 aaPredicted RBP11.89□□□□□ -0.51
SMAD5-201ENST00000506223 STK25O00506 426 aa11.88□□□□□ -0.51
SMAD5-201ENST00000506223 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
SMAD5-201ENST00000506223 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
SMAD5-201ENST00000506223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
SMAD5-201ENST00000506223 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
SMAD5-201ENST00000506223 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
SMAD5-201ENST00000506223 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
SMAD5-201ENST00000506223 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD5-201ENST00000506223 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
SMAD5-201ENST00000506223 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
SMAD5-201ENST00000506223 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
SMAD5-201ENST00000506223 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
SMAD5-201ENST00000506223 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
SMAD5-201ENST00000506223 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
SMAD5-201ENST00000506223 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
SMAD5-201ENST00000506223 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
SMAD5-201ENST00000506223 TSHZ2Q9NRE2 1034 aa11.79□□□□□ -0.52
SMAD5-201ENST00000506223 CLASP1Q7Z460 1538 aa11.79□□□□□ -0.52
SMAD5-201ENST00000506223 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
SMAD5-201ENST00000506223 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
SMAD5-201ENST00000506223 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
SMAD5-201ENST00000506223 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
SMAD5-201ENST00000506223 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
SMAD5-201ENST00000506223 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
SMAD5-201ENST00000506223 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
SMAD5-201ENST00000506223 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
SMAD5-201ENST00000506223 ABCC8Q09428 1581 aa11.71□□□□□ -0.54
SMAD5-201ENST00000506223 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
SMAD5-201ENST00000506223 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
SMAD5-201ENST00000506223 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
SMAD5-201ENST00000506223 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
SMAD5-201ENST00000506223 GAPVD1Q14C86 1478 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms