RNA–Protein interactions for RNA: ENST00000506222.6

LINC01016-201, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2 BASIC

Gene LINC01016, Length 3,151 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-201ENST00000506222 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
LINC01016-201ENST00000506222 WDR62O43379 1518 aa18.22■□□□□ 0.51
LINC01016-201ENST00000506222 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
LINC01016-201ENST00000506222 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
LINC01016-201ENST00000506222 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
LINC01016-201ENST00000506222 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
LINC01016-201ENST00000506222 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
LINC01016-201ENST00000506222 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
LINC01016-201ENST00000506222 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LINC01016-201ENST00000506222 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
LINC01016-201ENST00000506222 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
LINC01016-201ENST00000506222 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
LINC01016-201ENST00000506222 WDR97A6NE52 1622 aa18.02■□□□□ 0.47
LINC01016-201ENST00000506222 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
LINC01016-201ENST00000506222 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
LINC01016-201ENST00000506222 PBRM1Q86U86 1689 aa17.96■□□□□ 0.46
LINC01016-201ENST00000506222 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
LINC01016-201ENST00000506222 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
LINC01016-201ENST00000506222 CUL7Q14999 1698 aa17.94■□□□□ 0.46
LINC01016-201ENST00000506222 KCNH8Q96L42 1107 aa17.9■□□□□ 0.46
LINC01016-201ENST00000506222 ZNF777Q9ULD5 760 aaPredicted RBP17.9■□□□□ 0.46
LINC01016-201ENST00000506222 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
LINC01016-201ENST00000506222 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
LINC01016-201ENST00000506222 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
LINC01016-201ENST00000506222 HRCP23327 699 aa17.87■□□□□ 0.45
LINC01016-201ENST00000506222 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
LINC01016-201ENST00000506222 KIAA0586Q9BVV6 1533 aa17.86■□□□□ 0.45
LINC01016-201ENST00000506222 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
LINC01016-201ENST00000506222 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
LINC01016-201ENST00000506222 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
LINC01016-201ENST00000506222 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
LINC01016-201ENST00000506222 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
LINC01016-201ENST00000506222 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
LINC01016-201ENST00000506222 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
LINC01016-201ENST00000506222 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
LINC01016-201ENST00000506222 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
LINC01016-201ENST00000506222 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
LINC01016-201ENST00000506222 PTPRGP23470 1445 aa17.77■□□□□ 0.44
LINC01016-201ENST00000506222 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
LINC01016-201ENST00000506222 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
LINC01016-201ENST00000506222 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
LINC01016-201ENST00000506222 CASKIN1Q8WXD9 1431 aa17.74■□□□□ 0.43
LINC01016-201ENST00000506222 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
LINC01016-201ENST00000506222 NUP160Q12769 1436 aa17.74■□□□□ 0.43
LINC01016-201ENST00000506222 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
LINC01016-201ENST00000506222 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
LINC01016-201ENST00000506222 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
LINC01016-201ENST00000506222 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
LINC01016-201ENST00000506222 CHD1O14646 1710 aa17.68■□□□□ 0.42
LINC01016-201ENST00000506222 EFCAB5A4FU69 1503 aa17.68■□□□□ 0.42
LINC01016-201ENST00000506222 CDK11AQ9UQ88 783 aaPredicted RBP17.67■□□□□ 0.42
LINC01016-201ENST00000506222 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
LINC01016-201ENST00000506222 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
LINC01016-201ENST00000506222 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
LINC01016-201ENST00000506222 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
LINC01016-201ENST00000506222 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
LINC01016-201ENST00000506222 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
LINC01016-201ENST00000506222 KIAA0556O60303 1618 aa17.62■□□□□ 0.41
LINC01016-201ENST00000506222 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
LINC01016-201ENST00000506222 MAGI3Q5TCQ9 1506 aa17.61■□□□□ 0.41
LINC01016-201ENST00000506222 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
LINC01016-201ENST00000506222 NCOA2Q15596 1464 aa17.58■□□□□ 0.4
LINC01016-201ENST00000506222 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC01016-201ENST00000506222 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
LINC01016-201ENST00000506222 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
LINC01016-201ENST00000506222 ATP10BO94823 1461 aa17.53■□□□□ 0.4
LINC01016-201ENST00000506222 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
LINC01016-201ENST00000506222 FOXD1Q16676 465 aa17.52■□□□□ 0.39
LINC01016-201ENST00000506222 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
LINC01016-201ENST00000506222 UACAQ9BZF9 1416 aa17.5■□□□□ 0.39
LINC01016-201ENST00000506222 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
LINC01016-201ENST00000506222 LRRIQ1Q96JM4 1722 aa17.49■□□□□ 0.39
LINC01016-201ENST00000506222 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
LINC01016-201ENST00000506222 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
LINC01016-201ENST00000506222 RAB3GAP2Q9H2M9 1393 aa17.48■□□□□ 0.39
LINC01016-201ENST00000506222 RAPGEF6Q8TEU7 1601 aa17.45■□□□□ 0.38
LINC01016-201ENST00000506222 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
LINC01016-201ENST00000506222 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
LINC01016-201ENST00000506222 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
LINC01016-201ENST00000506222 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
LINC01016-201ENST00000506222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC01016-201ENST00000506222 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
LINC01016-201ENST00000506222 AFAP1Q8N556 730 aa17.38■□□□□ 0.37
LINC01016-201ENST00000506222 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
LINC01016-201ENST00000506222 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
LINC01016-201ENST00000506222 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
LINC01016-201ENST00000506222 KIF14Q15058 1648 aa17.36■□□□□ 0.37
LINC01016-201ENST00000506222 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
LINC01016-201ENST00000506222 CLASP1Q7Z460 1538 aa17.35■□□□□ 0.37
LINC01016-201ENST00000506222 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
LINC01016-201ENST00000506222 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
LINC01016-201ENST00000506222 EHBP1L1Q8N3D4 1523 aa17.34■□□□□ 0.37
LINC01016-201ENST00000506222 DHX57Q6P158 1386 aaKnown RBP17.34■□□□□ 0.37
LINC01016-201ENST00000506222 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
LINC01016-201ENST00000506222 ABCA8O94911 1581 aa17.32■□□□□ 0.36
LINC01016-201ENST00000506222 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
LINC01016-201ENST00000506222 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
LINC01016-201ENST00000506222 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
LINC01016-201ENST00000506222 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
LINC01016-201ENST00000506222 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms