RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
NR1I3-221ENST00000505944 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
NR1I3-221ENST00000505944 ERCC6L2Q5T890 1561 aa12.13□□□□□ -0.47
NR1I3-221ENST00000505944 FHAD1B1AJZ9 1412 aa12.13□□□□□ -0.47
NR1I3-221ENST00000505944 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
NR1I3-221ENST00000505944 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
NR1I3-221ENST00000505944 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
NR1I3-221ENST00000505944 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
NR1I3-221ENST00000505944 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
NR1I3-221ENST00000505944 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
NR1I3-221ENST00000505944 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
NR1I3-221ENST00000505944 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-221ENST00000505944 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
NR1I3-221ENST00000505944 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
NR1I3-221ENST00000505944 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
NR1I3-221ENST00000505944 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
NR1I3-221ENST00000505944 KDM6BO15054 1643 aa11.97□□□□□ -0.49
NR1I3-221ENST00000505944 KIAA0586Q9BVV6 1533 aa11.92□□□□□ -0.5
NR1I3-221ENST00000505944 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
NR1I3-221ENST00000505944 CUL7Q14999 1698 aa11.88□□□□□ -0.51
NR1I3-221ENST00000505944 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
NR1I3-221ENST00000505944 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
NR1I3-221ENST00000505944 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
NR1I3-221ENST00000505944 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
NR1I3-221ENST00000505944 GLI2P10070 1586 aa11.84□□□□□ -0.51
NR1I3-221ENST00000505944 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
NR1I3-221ENST00000505944 PTPRGP23470 1445 aa11.84□□□□□ -0.51
NR1I3-221ENST00000505944 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
NR1I3-221ENST00000505944 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
NR1I3-221ENST00000505944 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
NR1I3-221ENST00000505944 UHRF1BP1LA0JNW5 1464 aa11.81□□□□□ -0.52
NR1I3-221ENST00000505944 IGF1RP08069 1367 aa11.8□□□□□ -0.52
NR1I3-221ENST00000505944 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
NR1I3-221ENST00000505944 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
NR1I3-221ENST00000505944 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
NR1I3-221ENST00000505944 PPRC1Q5VV67 1664 aaKnown RBP11.76□□□□□ -0.53
NR1I3-221ENST00000505944 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
NR1I3-221ENST00000505944 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
NR1I3-221ENST00000505944 IQGAP2Q13576 1575 aa11.75□□□□□ -0.53
NR1I3-221ENST00000505944 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
NR1I3-221ENST00000505944 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
NR1I3-221ENST00000505944 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
NR1I3-221ENST00000505944 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
NR1I3-221ENST00000505944 HECW2Q9P2P5 1572 aa11.7□□□□□ -0.54
NR1I3-221ENST00000505944 TTBK1Q5TCY1 1321 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-221ENST00000505944 DISP1Q96F81 1524 aa11.68□□□□□ -0.54
NR1I3-221ENST00000505944 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
NR1I3-221ENST00000505944 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
NR1I3-221ENST00000505944 SCAF1Q9H7N4 1312 aaKnown RBP11.65□□□□□ -0.54
NR1I3-221ENST00000505944 COL17A1Q9UMD9 1497 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-221ENST00000505944 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
NR1I3-221ENST00000505944 KIAA0556O60303 1618 aa11.65□□□□□ -0.54
NR1I3-221ENST00000505944 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.55
NR1I3-221ENST00000505944 CTTNBP2Q8WZ74 1663 aa11.63□□□□□ -0.55
NR1I3-221ENST00000505944 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
NR1I3-221ENST00000505944 RAPGEF2Q9Y4G8 1499 aa11.62□□□□□ -0.55
NR1I3-221ENST00000505944 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
NR1I3-221ENST00000505944 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
NR1I3-221ENST00000505944 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
NR1I3-221ENST00000505944 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
NR1I3-221ENST00000505944 KCNA4P22459 653 aa11.6□□□□□ -0.55
NR1I3-221ENST00000505944 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
NR1I3-221ENST00000505944 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
NR1I3-221ENST00000505944 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
NR1I3-221ENST00000505944 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-221ENST00000505944 ABCA8O94911 1581 aa11.54□□□□□ -0.56
NR1I3-221ENST00000505944 KIF21BO75037 1637 aa11.51□□□□□ -0.57
NR1I3-221ENST00000505944 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
NR1I3-221ENST00000505944 PTPRMP28827 1452 aa11.49□□□□□ -0.57
NR1I3-221ENST00000505944 NEO1Q92859 1461 aa11.48□□□□□ -0.57
NR1I3-221ENST00000505944 ADAMTSL3P82987 1691 aa11.48□□□□□ -0.57
NR1I3-221ENST00000505944 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
NR1I3-221ENST00000505944 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
NR1I3-221ENST00000505944 PRXQ9BXM0 1461 aa11.45□□□□□ -0.58
NR1I3-221ENST00000505944 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
NR1I3-221ENST00000505944 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
NR1I3-221ENST00000505944 ATP10BO94823 1461 aa11.42□□□□□ -0.58
NR1I3-221ENST00000505944 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
NR1I3-221ENST00000505944 SAMD9Q5K651 1589 aa11.41□□□□□ -0.58
NR1I3-221ENST00000505944 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
NR1I3-221ENST00000505944 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.58
NR1I3-221ENST00000505944 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-221ENST00000505944 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
NR1I3-221ENST00000505944 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
NR1I3-221ENST00000505944 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
NR1I3-221ENST00000505944 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
NR1I3-221ENST00000505944 FANCAO15360 1455 aa11.38□□□□□ -0.59
NR1I3-221ENST00000505944 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
NR1I3-221ENST00000505944 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
NR1I3-221ENST00000505944 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
NR1I3-221ENST00000505944 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
NR1I3-221ENST00000505944 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-221ENST00000505944 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
NR1I3-221ENST00000505944 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
NR1I3-221ENST00000505944 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
NR1I3-221ENST00000505944 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
NR1I3-221ENST00000505944 EFCAB5A4FU69 1503 aa11.34□□□□□ -0.59
NR1I3-221ENST00000505944 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
NR1I3-221ENST00000505944 RICTORQ6R327 1708 aa11.33□□□□□ -0.6
NR1I3-221ENST00000505944 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms