RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
PDLIM7-214ENST00000505746 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
PDLIM7-214ENST00000505746 CUL7Q14999 1698 aa20.83■□□□□ 0.92
PDLIM7-214ENST00000505746 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
PDLIM7-214ENST00000505746 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDLIM7-214ENST00000505746 CARMIL2Q6F5E8 1435 aa20.67■□□□□ 0.9
PDLIM7-214ENST00000505746 PTPRGP23470 1445 aa20.66■□□□□ 0.9
PDLIM7-214ENST00000505746 FAM69CQ0P6D2 419 aa20.65■□□□□ 0.9
PDLIM7-214ENST00000505746 TNIKQ9UKE5 1360 aa20.63■□□□□ 0.89
PDLIM7-214ENST00000505746 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
PDLIM7-214ENST00000505746 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
PDLIM7-214ENST00000505746 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
PDLIM7-214ENST00000505746 ADCY10Q96PN6 1610 aa20.62■□□□□ 0.89
PDLIM7-214ENST00000505746 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-214ENST00000505746 IQGAP2Q13576 1575 aa20.6■□□□□ 0.89
PDLIM7-214ENST00000505746 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-214ENST00000505746 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
PDLIM7-214ENST00000505746 DISP1Q96F81 1524 aa20.51■□□□□ 0.87
PDLIM7-214ENST00000505746 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
PDLIM7-214ENST00000505746 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
PDLIM7-214ENST00000505746 UGGT2Q9NYU1 1516 aa20.5■□□□□ 0.87
PDLIM7-214ENST00000505746 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
PDLIM7-214ENST00000505746 UHRF1BP1LA0JNW5 1464 aa20.49■□□□□ 0.87
PDLIM7-214ENST00000505746 PLB1Q6P1J6 1458 aa20.44■□□□□ 0.86
PDLIM7-214ENST00000505746 ASXL2Q76L83 1435 aa20.43■□□□□ 0.86
PDLIM7-214ENST00000505746 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
PDLIM7-214ENST00000505746 KIAA0556O60303 1618 aa20.4■□□□□ 0.86
PDLIM7-214ENST00000505746 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
PDLIM7-214ENST00000505746 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
PDLIM7-214ENST00000505746 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
PDLIM7-214ENST00000505746 GLI2P10070 1586 aa20.34■□□□□ 0.85
PDLIM7-214ENST00000505746 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
PDLIM7-214ENST00000505746 KDM6BO15054 1643 aa20.33■□□□□ 0.84
PDLIM7-214ENST00000505746 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
PDLIM7-214ENST00000505746 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-214ENST00000505746 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
PDLIM7-214ENST00000505746 ZCCHC11Q5TAX3 1644 aaKnown RBP20.27■□□□□ 0.83
PDLIM7-214ENST00000505746 EEA1Q15075 1411 aa20.25■□□□□ 0.83
PDLIM7-214ENST00000505746 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
PDLIM7-214ENST00000505746 ABCA8O94911 1581 aa20.22■□□□□ 0.83
PDLIM7-214ENST00000505746 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
PDLIM7-214ENST00000505746 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
PDLIM7-214ENST00000505746 KCNH8Q96L42 1107 aa20.19■□□□□ 0.82
PDLIM7-214ENST00000505746 MAP3K4Q9Y6R4 1608 aa20.18■□□□□ 0.82
PDLIM7-214ENST00000505746 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-214ENST00000505746 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
PDLIM7-214ENST00000505746 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
PDLIM7-214ENST00000505746 COL17A1Q9UMD9 1497 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-214ENST00000505746 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
PDLIM7-214ENST00000505746 MAGI3Q5TCQ9 1506 aa20.1■□□□□ 0.81
PDLIM7-214ENST00000505746 ATP10BO94823 1461 aa20.1■□□□□ 0.81
PDLIM7-214ENST00000505746 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
PDLIM7-214ENST00000505746 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
PDLIM7-214ENST00000505746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-214ENST00000505746 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-214ENST00000505746 CFAP43Q8NDM7 1665 aa20.04■□□□□ 0.8
PDLIM7-214ENST00000505746 RAPGEF6Q8TEU7 1601 aa20.01■□□□□ 0.79
PDLIM7-214ENST00000505746 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
PDLIM7-214ENST00000505746 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
PDLIM7-214ENST00000505746 KIF21BO75037 1637 aa19.99■□□□□ 0.79
PDLIM7-214ENST00000505746 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
PDLIM7-214ENST00000505746 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
PDLIM7-214ENST00000505746 NUP153P49790 1475 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-214ENST00000505746 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-214ENST00000505746 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
PDLIM7-214ENST00000505746 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
PDLIM7-214ENST00000505746 ARAP3Q8WWN8 1544 aa19.93■□□□□ 0.78
PDLIM7-214ENST00000505746 ABCA9Q8IUA7 1624 aa19.93■□□□□ 0.78
PDLIM7-214ENST00000505746 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
PDLIM7-214ENST00000505746 NEO1Q92859 1461 aa19.88■□□□□ 0.77
PDLIM7-214ENST00000505746 RAPGEF3O95398 923 aa19.85■□□□□ 0.77
PDLIM7-214ENST00000505746 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
PDLIM7-214ENST00000505746 ATP1B4Q9UN42 357 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-214ENST00000505746 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
PDLIM7-214ENST00000505746 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-214ENST00000505746 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
PDLIM7-214ENST00000505746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM7-214ENST00000505746 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-214ENST00000505746 FANCAO15360 1455 aa19.75■□□□□ 0.75
PDLIM7-214ENST00000505746 DENND4BO75064 1496 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-214ENST00000505746 HECW1Q76N89 1606 aa19.72■□□□□ 0.75
PDLIM7-214ENST00000505746 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-214ENST00000505746 CFAP74Q9C0B2 1584 aa19.7■□□□□ 0.74
PDLIM7-214ENST00000505746 PLCH2O75038 1416 aa19.7■□□□□ 0.74
PDLIM7-214ENST00000505746 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
PDLIM7-214ENST00000505746 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
PDLIM7-214ENST00000505746 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
PDLIM7-214ENST00000505746 CLIP1P30622 1438 aa19.64■□□□□ 0.73
PDLIM7-214ENST00000505746 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-214ENST00000505746 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
PDLIM7-214ENST00000505746 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.73
PDLIM7-214ENST00000505746 MAGI2Q86UL8 1455 aa19.62■□□□□ 0.73
PDLIM7-214ENST00000505746 PTPRMP28827 1452 aa19.61■□□□□ 0.73
PDLIM7-214ENST00000505746 RICTORQ6R327 1708 aa19.61■□□□□ 0.73
PDLIM7-214ENST00000505746 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
PDLIM7-214ENST00000505746 ADAMTSL3P82987 1691 aa19.6■□□□□ 0.73
PDLIM7-214ENST00000505746 ZMYM4Q5VZL5 1548 aa19.6■□□□□ 0.73
PDLIM7-214ENST00000505746 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
PDLIM7-214ENST00000505746 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
PDLIM7-214ENST00000505746 KIF14Q15058 1648 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms