RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
RFC1-210ENST00000505077 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
RFC1-210ENST00000505077 FBLN2P98095 1184 aa16.8■□□□□ 0.28
RFC1-210ENST00000505077 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
RFC1-210ENST00000505077 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
RFC1-210ENST00000505077 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
RFC1-210ENST00000505077 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
RFC1-210ENST00000505077 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
RFC1-210ENST00000505077 EFCAB5A4FU69 1503 aa16.69■□□□□ 0.26
RFC1-210ENST00000505077 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
RFC1-210ENST00000505077 UBTFP17480 764 aaKnown RBP16.66■□□□□ 0.26
RFC1-210ENST00000505077 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
RFC1-210ENST00000505077 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
RFC1-210ENST00000505077 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
RFC1-210ENST00000505077 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
RFC1-210ENST00000505077 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
RFC1-210ENST00000505077 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
RFC1-210ENST00000505077 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
RFC1-210ENST00000505077 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
RFC1-210ENST00000505077 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
RFC1-210ENST00000505077 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
RFC1-210ENST00000505077 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
RFC1-210ENST00000505077 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
RFC1-210ENST00000505077 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
RFC1-210ENST00000505077 CLIP1P30622 1438 aa16.54■□□□□ 0.24
RFC1-210ENST00000505077 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
RFC1-210ENST00000505077 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
RFC1-210ENST00000505077 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
RFC1-210ENST00000505077 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
RFC1-210ENST00000505077 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
RFC1-210ENST00000505077 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
RFC1-210ENST00000505077 ABCA8O94911 1581 aa16.42■□□□□ 0.22
RFC1-210ENST00000505077 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
RFC1-210ENST00000505077 PTPRGP23470 1445 aa16.41■□□□□ 0.22
RFC1-210ENST00000505077 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
RFC1-210ENST00000505077 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
RFC1-210ENST00000505077 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
RFC1-210ENST00000505077 ABCC2Q92887 1545 aa16.39■□□□□ 0.21
RFC1-210ENST00000505077 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
RFC1-210ENST00000505077 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
RFC1-210ENST00000505077 LRRIQ1Q96JM4 1722 aa16.37■□□□□ 0.21
RFC1-210ENST00000505077 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
RFC1-210ENST00000505077 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
RFC1-210ENST00000505077 CASKIN1Q8WXD9 1431 aa16.35■□□□□ 0.21
RFC1-210ENST00000505077 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
RFC1-210ENST00000505077 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
RFC1-210ENST00000505077 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
RFC1-210ENST00000505077 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.2
RFC1-210ENST00000505077 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
RFC1-210ENST00000505077 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
RFC1-210ENST00000505077 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
RFC1-210ENST00000505077 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
RFC1-210ENST00000505077 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
RFC1-210ENST00000505077 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
RFC1-210ENST00000505077 TIAM1Q13009 1591 aa16.24■□□□□ 0.19
RFC1-210ENST00000505077 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
RFC1-210ENST00000505077 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
RFC1-210ENST00000505077 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
RFC1-210ENST00000505077 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
RFC1-210ENST00000505077 ATP10BO94823 1461 aa16.19■□□□□ 0.18
RFC1-210ENST00000505077 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
RFC1-210ENST00000505077 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
RFC1-210ENST00000505077 KIF14Q15058 1648 aa16.13■□□□□ 0.17
RFC1-210ENST00000505077 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
RFC1-210ENST00000505077 WDR7Q9Y4E6 1490 aa16.13■□□□□ 0.17
RFC1-210ENST00000505077 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
RFC1-210ENST00000505077 APLP2Q06481 763 aa16.11■□□□□ 0.17
RFC1-210ENST00000505077 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
RFC1-210ENST00000505077 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
RFC1-210ENST00000505077 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
RFC1-210ENST00000505077 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
RFC1-210ENST00000505077 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
RFC1-210ENST00000505077 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
RFC1-210ENST00000505077 DIP2BQ9P265 1576 aa16.09■□□□□ 0.17
RFC1-210ENST00000505077 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.17
RFC1-210ENST00000505077 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.17
RFC1-210ENST00000505077 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.16
RFC1-210ENST00000505077 GLI2P10070 1586 aa16.07■□□□□ 0.16
RFC1-210ENST00000505077 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
RFC1-210ENST00000505077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
RFC1-210ENST00000505077 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
RFC1-210ENST00000505077 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
RFC1-210ENST00000505077 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
RFC1-210ENST00000505077 MAP3K4Q9Y6R4 1608 aa16.04■□□□□ 0.16
RFC1-210ENST00000505077 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
RFC1-210ENST00000505077 PREX2Q70Z35 1606 aa16.03■□□□□ 0.16
RFC1-210ENST00000505077 TTC37Q6PGP7 1564 aa16.03■□□□□ 0.16
RFC1-210ENST00000505077 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
RFC1-210ENST00000505077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.01■□□□□ 0.15
RFC1-210ENST00000505077 ARAP3Q8WWN8 1544 aa16■□□□□ 0.15
RFC1-210ENST00000505077 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
RFC1-210ENST00000505077 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
RFC1-210ENST00000505077 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
RFC1-210ENST00000505077 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
RFC1-210ENST00000505077 PPRC1Q5VV67 1664 aaKnown RBP15.95■□□□□ 0.14
RFC1-210ENST00000505077 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
RFC1-210ENST00000505077 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
RFC1-210ENST00000505077 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
RFC1-210ENST00000505077 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
RFC1-210ENST00000505077 TEX14Q8IWB6 1497 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms