RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
SKP2-203ENST00000504386 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
SKP2-203ENST00000504386 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
SKP2-203ENST00000504386 KIAA0586Q9BVV6 1533 aa13.02□□□□□ -0.33
SKP2-203ENST00000504386 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
SKP2-203ENST00000504386 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
SKP2-203ENST00000504386 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
SKP2-203ENST00000504386 SHROOM2Q13796 1616 aa12.97□□□□□ -0.33
SKP2-203ENST00000504386 RUSC2Q8N2Y8 1516 aa12.97□□□□□ -0.33
SKP2-203ENST00000504386 ARAP1Q96P48 1450 aa12.97□□□□□ -0.33
SKP2-203ENST00000504386 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
SKP2-203ENST00000504386 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
SKP2-203ENST00000504386 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
SKP2-203ENST00000504386 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
SKP2-203ENST00000504386 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
SKP2-203ENST00000504386 FAM9AQ8IZU1 332 aaPredicted RBP12.9□□□□□ -0.34
SKP2-203ENST00000504386 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
SKP2-203ENST00000504386 TNIKQ9UKE5 1360 aa12.85□□□□□ -0.35
SKP2-203ENST00000504386 UGGT2Q9NYU1 1516 aa12.84□□□□□ -0.35
SKP2-203ENST00000504386 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
SKP2-203ENST00000504386 PTPRGP23470 1445 aa12.83□□□□□ -0.36
SKP2-203ENST00000504386 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
SKP2-203ENST00000504386 CTTNBP2Q8WZ74 1663 aa12.82□□□□□ -0.36
SKP2-203ENST00000504386 KIF21BO75037 1637 aa12.81□□□□□ -0.36
SKP2-203ENST00000504386 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
SKP2-203ENST00000504386 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
SKP2-203ENST00000504386 KIAA0556O60303 1618 aa12.76□□□□□ -0.37
SKP2-203ENST00000504386 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
SKP2-203ENST00000504386 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
SKP2-203ENST00000504386 UHRF1BP1LA0JNW5 1464 aa12.73□□□□□ -0.37
SKP2-203ENST00000504386 EFCAB5A4FU69 1503 aa12.71□□□□□ -0.38
SKP2-203ENST00000504386 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
SKP2-203ENST00000504386 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
SKP2-203ENST00000504386 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
SKP2-203ENST00000504386 ADCY10Q96PN6 1610 aa12.69□□□□□ -0.38
SKP2-203ENST00000504386 SAMD9Q5K651 1589 aa12.67□□□□□ -0.38
SKP2-203ENST00000504386 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
SKP2-203ENST00000504386 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
SKP2-203ENST00000504386 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
SKP2-203ENST00000504386 ABCA8O94911 1581 aa12.62□□□□□ -0.39
SKP2-203ENST00000504386 P3H3Q8IVL6 736 aa12.62□□□□□ -0.39
SKP2-203ENST00000504386 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
SKP2-203ENST00000504386 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
SKP2-203ENST00000504386 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
SKP2-203ENST00000504386 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
SKP2-203ENST00000504386 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
SKP2-203ENST00000504386 FHOD3Q2V2M9 1422 aa12.59□□□□□ -0.39
SKP2-203ENST00000504386 RAPGEF6Q8TEU7 1601 aa12.56□□□□□ -0.4
SKP2-203ENST00000504386 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
SKP2-203ENST00000504386 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
SKP2-203ENST00000504386 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
SKP2-203ENST00000504386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
SKP2-203ENST00000504386 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
SKP2-203ENST00000504386 GLI2P10070 1586 aa12.54□□□□□ -0.4
SKP2-203ENST00000504386 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
SKP2-203ENST00000504386 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
SKP2-203ENST00000504386 CLIP1P30622 1438 aa12.53□□□□□ -0.4
SKP2-203ENST00000504386 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.41
SKP2-203ENST00000504386 PLEKHD1A6NEE1 506 aa12.51□□□□□ -0.41
SKP2-203ENST00000504386 ATP10BO94823 1461 aa12.51□□□□□ -0.41
SKP2-203ENST00000504386 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
SKP2-203ENST00000504386 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
SKP2-203ENST00000504386 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
SKP2-203ENST00000504386 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
SKP2-203ENST00000504386 MSH5O43196 834 aa12.48□□□□□ -0.41
SKP2-203ENST00000504386 ARID3CA6NKF2 412 aa12.46□□□□□ -0.41
SKP2-203ENST00000504386 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
SKP2-203ENST00000504386 ATP1B4Q9UN42 357 aaPredicted RBP12.46□□□□□ -0.41
SKP2-203ENST00000504386 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.42
SKP2-203ENST00000504386 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
SKP2-203ENST00000504386 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
SKP2-203ENST00000504386 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
SKP2-203ENST00000504386 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
SKP2-203ENST00000504386 FYCO1Q9BQS8 1478 aa12.44□□□□□ -0.42
SKP2-203ENST00000504386 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
SKP2-203ENST00000504386 MAGI3Q5TCQ9 1506 aa12.43□□□□□ -0.42
SKP2-203ENST00000504386 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
SKP2-203ENST00000504386 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
SKP2-203ENST00000504386 KDM6BO15054 1643 aa12.39□□□□□ -0.43
SKP2-203ENST00000504386 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
SKP2-203ENST00000504386 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
SKP2-203ENST00000504386 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
SKP2-203ENST00000504386 PCF11O94913 1555 aaKnown RBP12.37□□□□□ -0.43
SKP2-203ENST00000504386 NEO1Q92859 1461 aa12.36□□□□□ -0.43
SKP2-203ENST00000504386 LOC105371045A0A1W2PR82 267 aa12.36□□□□□ -0.43
SKP2-203ENST00000504386 KIF14Q15058 1648 aa12.34□□□□□ -0.43
SKP2-203ENST00000504386 PPRC1Q5VV67 1664 aaKnown RBP12.34□□□□□ -0.43
SKP2-203ENST00000504386 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
SKP2-203ENST00000504386 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
SKP2-203ENST00000504386 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
SKP2-203ENST00000504386 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
SKP2-203ENST00000504386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
SKP2-203ENST00000504386 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
SKP2-203ENST00000504386 ADRA2BP18089 450 aa12.31□□□□□ -0.44
SKP2-203ENST00000504386 EFCAB2Q5VUJ9 269 aa12.31□□□□□ -0.44
SKP2-203ENST00000504386 PLCH2O75038 1416 aa12.3□□□□□ -0.44
SKP2-203ENST00000504386 FANCAO15360 1455 aa12.3□□□□□ -0.44
SKP2-203ENST00000504386 APLP2Q06481 763 aa12.3□□□□□ -0.44
SKP2-203ENST00000504386 TTC37Q6PGP7 1564 aa12.27□□□□□ -0.44
SKP2-203ENST00000504386 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms