RNA–Protein interactions for RNA: ENST00000503997.5

NDUFC1-205, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 3

Gene NDUFC1, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-205ENST00000503997 RAPGEF2Q9Y4G8 1499 aa17.46■□□□□ 0.39
NDUFC1-205ENST00000503997 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
NDUFC1-205ENST00000503997 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
NDUFC1-205ENST00000503997 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
NDUFC1-205ENST00000503997 EEA1Q15075 1411 aa17.42■□□□□ 0.38
NDUFC1-205ENST00000503997 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
NDUFC1-205ENST00000503997 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
NDUFC1-205ENST00000503997 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
NDUFC1-205ENST00000503997 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
NDUFC1-205ENST00000503997 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
NDUFC1-205ENST00000503997 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
NDUFC1-205ENST00000503997 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
NDUFC1-205ENST00000503997 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
NDUFC1-205ENST00000503997 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
NDUFC1-205ENST00000503997 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
NDUFC1-205ENST00000503997 PTPRGP23470 1445 aa17.27■□□□□ 0.35
NDUFC1-205ENST00000503997 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
NDUFC1-205ENST00000503997 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
NDUFC1-205ENST00000503997 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
NDUFC1-205ENST00000503997 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
NDUFC1-205ENST00000503997 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
NDUFC1-205ENST00000503997 DISP1Q96F81 1524 aa17.17■□□□□ 0.34
NDUFC1-205ENST00000503997 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
NDUFC1-205ENST00000503997 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
NDUFC1-205ENST00000503997 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
NDUFC1-205ENST00000503997 KIF21BO75037 1637 aa17.12■□□□□ 0.33
NDUFC1-205ENST00000503997 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
NDUFC1-205ENST00000503997 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
NDUFC1-205ENST00000503997 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
NDUFC1-205ENST00000503997 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
NDUFC1-205ENST00000503997 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
NDUFC1-205ENST00000503997 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
NDUFC1-205ENST00000503997 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
NDUFC1-205ENST00000503997 MAPKBP1O60336 1514 aa16.99■□□□□ 0.31
NDUFC1-205ENST00000503997 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
NDUFC1-205ENST00000503997 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.31
NDUFC1-205ENST00000503997 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
NDUFC1-205ENST00000503997 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
NDUFC1-205ENST00000503997 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
NDUFC1-205ENST00000503997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
NDUFC1-205ENST00000503997 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
NDUFC1-205ENST00000503997 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
NDUFC1-205ENST00000503997 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
NDUFC1-205ENST00000503997 ABCA8O94911 1581 aa16.93■□□□□ 0.3
NDUFC1-205ENST00000503997 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
NDUFC1-205ENST00000503997 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
NDUFC1-205ENST00000503997 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
NDUFC1-205ENST00000503997 ATP10BO94823 1461 aa16.86■□□□□ 0.29
NDUFC1-205ENST00000503997 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
NDUFC1-205ENST00000503997 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
NDUFC1-205ENST00000503997 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
NDUFC1-205ENST00000503997 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
NDUFC1-205ENST00000503997 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
NDUFC1-205ENST00000503997 DIP2BQ9P265 1576 aa16.84■□□□□ 0.29
NDUFC1-205ENST00000503997 RAPGEF6Q8TEU7 1601 aa16.83■□□□□ 0.28
NDUFC1-205ENST00000503997 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
NDUFC1-205ENST00000503997 CLIP1P30622 1438 aa16.82■□□□□ 0.28
NDUFC1-205ENST00000503997 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
NDUFC1-205ENST00000503997 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
NDUFC1-205ENST00000503997 GLI2P10070 1586 aa16.8■□□□□ 0.28
NDUFC1-205ENST00000503997 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
NDUFC1-205ENST00000503997 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
NDUFC1-205ENST00000503997 CEP162Q5TB80 1403 aa16.71■□□□□ 0.27
NDUFC1-205ENST00000503997 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
NDUFC1-205ENST00000503997 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
NDUFC1-205ENST00000503997 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
NDUFC1-205ENST00000503997 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
NDUFC1-205ENST00000503997 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
NDUFC1-205ENST00000503997 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
NDUFC1-205ENST00000503997 MAGI3Q5TCQ9 1506 aa16.66■□□□□ 0.26
NDUFC1-205ENST00000503997 PHLDB1Q86UU1 1377 aa16.64■□□□□ 0.25
NDUFC1-205ENST00000503997 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
NDUFC1-205ENST00000503997 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
NDUFC1-205ENST00000503997 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
NDUFC1-205ENST00000503997 KDM6BO15054 1643 aa16.62■□□□□ 0.25
NDUFC1-205ENST00000503997 TROQ12816 1431 aaPredicted RBP16.61■□□□□ 0.25
NDUFC1-205ENST00000503997 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
NDUFC1-205ENST00000503997 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
NDUFC1-205ENST00000503997 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.24
NDUFC1-205ENST00000503997 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
NDUFC1-205ENST00000503997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.245e-15■□□□□ 8.6
NDUFC1-205ENST00000503997 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
NDUFC1-205ENST00000503997 NEO1Q92859 1461 aa16.54■□□□□ 0.24
NDUFC1-205ENST00000503997 PLCH2O75038 1416 aa16.53■□□□□ 0.24
NDUFC1-205ENST00000503997 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
NDUFC1-205ENST00000503997 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
NDUFC1-205ENST00000503997 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
NDUFC1-205ENST00000503997 FANCAO15360 1455 aa16.51■□□□□ 0.23
NDUFC1-205ENST00000503997 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
NDUFC1-205ENST00000503997 APLP2Q06481 763 aa16.51■□□□□ 0.23
NDUFC1-205ENST00000503997 AKNAQ7Z591 1439 aa16.51■□□□□ 0.23
NDUFC1-205ENST00000503997 KIF14Q15058 1648 aa16.49■□□□□ 0.23
NDUFC1-205ENST00000503997 LRRIQ1Q96JM4 1722 aa16.47■□□□□ 0.23
NDUFC1-205ENST00000503997 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
NDUFC1-205ENST00000503997 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
NDUFC1-205ENST00000503997 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
NDUFC1-205ENST00000503997 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
NDUFC1-205ENST00000503997 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
NDUFC1-205ENST00000503997 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
NDUFC1-205ENST00000503997 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms