RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 ERCC6L2Q5T890 1561 aa37.3■■■■□ 3.56
CCHCR1-217ENST00000503420 KIAA0586Q9BVV6 1533 aa37.27■■■■□ 3.56
CCHCR1-217ENST00000503420 TRHP20396 242 aaPredicted RBP37.27■■■■□ 3.56
CCHCR1-217ENST00000503420 RUSC2Q8N2Y8 1516 aa37.26■■■■□ 3.56
CCHCR1-217ENST00000503420 RAPGEF2Q9Y4G8 1499 aa37.15■■■■□ 3.54
CCHCR1-217ENST00000503420 CARMIL2Q6F5E8 1435 aa36.98■■■■□ 3.51
CCHCR1-217ENST00000503420 IQGAP2Q13576 1575 aa36.96■■■■□ 3.51
CCHCR1-217ENST00000503420 NPM1P06748 294 aaKnown RBP eCLIP36.94■■■■□ 3.5
CCHCR1-217ENST00000503420 CSRNP3Q8WYN3 585 aa36.92■■■■□ 3.5
CCHCR1-217ENST00000503420 TTBK1Q5TCY1 1321 aaPredicted RBP36.9■■■■□ 3.5
CCHCR1-217ENST00000503420 PTPRGP23470 1445 aa36.88■■■■□ 3.49
CCHCR1-217ENST00000503420 PRXQ9BXM0 1461 aa36.87■■■■□ 3.49
CCHCR1-217ENST00000503420 TNIKQ9UKE5 1360 aa36.85■■■■□ 3.49
CCHCR1-217ENST00000503420 EEA1Q15075 1411 aa36.82■■■■□ 3.48
CCHCR1-217ENST00000503420 CHIC1Q5VXU3 224 aa36.78■■■■□ 3.48
CCHCR1-217ENST00000503420 FAM9AQ8IZU1 332 aaPredicted RBP36.76■■■■□ 3.48
CCHCR1-217ENST00000503420 UGGT2Q9NYU1 1516 aa36.75■■■■□ 3.47
CCHCR1-217ENST00000503420 DISP1Q96F81 1524 aa36.71■■■■□ 3.47
CCHCR1-217ENST00000503420 CTTNBP2Q8WZ74 1663 aa36.67■■■■□ 3.46
CCHCR1-217ENST00000503420 ADCY10Q96PN6 1610 aa36.67■■■■□ 3.46
CCHCR1-217ENST00000503420 GOLGA3Q08378 1498 aa36.62■■■■□ 3.45
CCHCR1-217ENST00000503420 KIAA0556O60303 1618 aa36.58■■■■□ 3.45
CCHCR1-217ENST00000503420 UACAQ9BZF9 1416 aa36.57■■■■□ 3.44
CCHCR1-217ENST00000503420 FAM69CQ0P6D2 419 aa36.54■■■■□ 3.44
CCHCR1-217ENST00000503420 MAPKBP1O60336 1514 aa36.54■■■■□ 3.44
CCHCR1-217ENST00000503420 UHRF1BP1LA0JNW5 1464 aa36.5■■■■□ 3.43
CCHCR1-217ENST00000503420 ABCC2Q92887 1545 aa36.5■■■■□ 3.43
CCHCR1-217ENST00000503420 ABCC10Q5T3U5 1492 aa36.47■■■■□ 3.43
CCHCR1-217ENST00000503420 P3H3Q8IVL6 736 aa36.43■■■■□ 3.42
CCHCR1-217ENST00000503420 RANGAP1P46060 587 aaPredicted RBP36.38■■■■□ 3.41
CCHCR1-217ENST00000503420 KIF13AQ9H1H9 1805 aa36.36■■■■□ 3.41
CCHCR1-217ENST00000503420 KIF21BO75037 1637 aa36.34■■■■□ 3.41
CCHCR1-217ENST00000503420 PLB1Q6P1J6 1458 aa36.34■■■■□ 3.41
CCHCR1-217ENST00000503420 ASXL2Q76L83 1435 aa36.33■■■■□ 3.41
CCHCR1-217ENST00000503420 UBTFP17480 764 aaKnown RBP36.32■■■■□ 3.4
CCHCR1-217ENST00000503420 EHMT2Q96KQ7 1210 aa36.32■■■■□ 3.4
CCHCR1-217ENST00000503420 KDM5BQ9UGL1 1544 aa36.31■■■■□ 3.4
CCHCR1-217ENST00000503420 DIP2BQ9P265 1576 aa36.31■■■■□ 3.4
CCHCR1-217ENST00000503420 ABCA8O94911 1581 aa36.21■■■■□ 3.39
CCHCR1-217ENST00000503420 ZCCHC11Q5TAX3 1644 aaKnown RBP36.19■■■■□ 3.38
CCHCR1-217ENST00000503420 SAMD9Q5K651 1589 aa36.19■■■■□ 3.38
CCHCR1-217ENST00000503420 ARID3CA6NKF2 412 aa36.11■■■■□ 3.37
CCHCR1-217ENST00000503420 GLI2P10070 1586 aa36.09■■■■□ 3.37
CCHCR1-217ENST00000503420 FHOD3Q2V2M9 1422 aa36.08■■■■□ 3.37
CCHCR1-217ENST00000503420 EPRSP07814 1512 aaKnown RBP36.08■■■■□ 3.37
CCHCR1-217ENST00000503420 WDR7Q9Y4E6 1490 aa36.07■■■■□ 3.37
CCHCR1-217ENST00000503420 TSPOAP1O95153 1857 aa36.07■■■■□ 3.36
CCHCR1-217ENST00000503420 KCNH8Q96L42 1107 aa36.06■■■■□ 3.36
CCHCR1-217ENST00000503420 EFCAB5A4FU69 1503 aa36.05■■■■□ 3.36
CCHCR1-217ENST00000503420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.04■■■■□ 3.36
CCHCR1-217ENST00000503420 HNRNPUL2Q1KMD3 747 aaKnown RBP36.04■■■■□ 3.36
CCHCR1-217ENST00000503420 ATP10BO94823 1461 aa35.99■■■■□ 3.35
CCHCR1-217ENST00000503420 RAPGEF6Q8TEU7 1601 aa35.97■■■■□ 3.35
CCHCR1-217ENST00000503420 KDM6BO15054 1643 aa35.88■■■■□ 3.33
CCHCR1-217ENST00000503420 TEX14Q8IWB6 1497 aa35.87■■■■□ 3.33
CCHCR1-217ENST00000503420 MAP3K4Q9Y6R4 1608 aa35.86■■■■□ 3.33
CCHCR1-217ENST00000503420 CD109Q6YHK3 1445 aa35.85■■■■□ 3.33
CCHCR1-217ENST00000503420 NUP153P49790 1475 aaKnown RBP35.85■■■■□ 3.33
CCHCR1-217ENST00000503420 ATP1B4Q9UN42 357 aaPredicted RBP35.83■■■■□ 3.33
CCHCR1-217ENST00000503420 PLEKHD1A6NEE1 506 aa35.82■■■■□ 3.32
CCHCR1-217ENST00000503420 ARHGAP35Q9NRY4 1499 aa35.81■■■■□ 3.32
CCHCR1-217ENST00000503420 FMN1Q68DA7 1419 aa35.81■■■■□ 3.32
CCHCR1-217ENST00000503420 PPRC1Q5VV67 1664 aaKnown RBP35.79■■■■□ 3.32
CCHCR1-217ENST00000503420 CFAP43Q8NDM7 1665 aa35.74■■■■□ 3.31
CCHCR1-217ENST00000503420 MAGI3Q5TCQ9 1506 aa35.72■■■■□ 3.31
CCHCR1-217ENST00000503420 AEBP2Q6ZN18 517 aaPredicted RBP35.7■■■■□ 3.31
CCHCR1-217ENST00000503420 CDK11AQ9UQ88 783 aaPredicted RBP35.62■■■■□ 3.29
CCHCR1-217ENST00000503420 COL17A1Q9UMD9 1497 aaPredicted RBP35.6■■■■□ 3.29
CCHCR1-217ENST00000503420 HECW1Q76N89 1606 aa35.58■■■■□ 3.29
CCHCR1-217ENST00000503420 ABCA9Q8IUA7 1624 aa35.58■■■■□ 3.29
CCHCR1-217ENST00000503420 CLIP1P30622 1438 aa35.57■■■■□ 3.29
CCHCR1-217ENST00000503420 CDK13Q14004 1512 aaKnown RBP35.56■■■■□ 3.28
CCHCR1-217ENST00000503420 PHLDB1Q86UU1 1377 aa35.53■■■■□ 3.28
CCHCR1-217ENST00000503420 CASKIN1Q8WXD9 1431 aa35.45■■■■□ 3.27
CCHCR1-217ENST00000503420 NEO1Q92859 1461 aa35.42■■■■□ 3.26
CCHCR1-217ENST00000503420 ARAP3Q8WWN8 1544 aa35.42■■■■□ 3.26
CCHCR1-217ENST00000503420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.39■■■■□ 3.261e-5■■■■□ 25.8
CCHCR1-217ENST00000503420 CCDC18Q5T9S5 1454 aa35.35■■■■□ 3.25
CCHCR1-217ENST00000503420 PCF11O94913 1555 aaKnown RBP35.34■■■■□ 3.25
CCHCR1-217ENST00000503420 TROQ12816 1431 aaPredicted RBP35.33■■■■□ 3.25
CCHCR1-217ENST00000503420 LOC105371045A0A1W2PR82 267 aa35.32■■■■□ 3.24
CCHCR1-217ENST00000503420 RAPGEF3O95398 923 aa35.32■■■■□ 3.24
CCHCR1-217ENST00000503420 FYCO1Q9BQS8 1478 aa35.31■■■■□ 3.24
CCHCR1-217ENST00000503420 FANCAO15360 1455 aa35.3■■■■□ 3.24
CCHCR1-217ENST00000503420 TTC37Q6PGP7 1564 aa35.3■■■■□ 3.24
CCHCR1-217ENST00000503420 KDM4FA0A1W2PPD8 638 aa35.29■■■■□ 3.24
CCHCR1-217ENST00000503420 CEP162Q5TB80 1403 aa35.29■■■■□ 3.24
CCHCR1-217ENST00000503420 AKNAQ7Z591 1439 aa35.28■■■■□ 3.24
CCHCR1-217ENST00000503420 PLCH2O75038 1416 aa35.26■■■■□ 3.24
CCHCR1-217ENST00000503420 EFCAB2Q5VUJ9 269 aa35.25■■■■□ 3.23
CCHCR1-217ENST00000503420 CFAP74Q9C0B2 1584 aa35.24■■■■□ 3.23
CCHCR1-217ENST00000503420 KIF14Q15058 1648 aa35.24■■■■□ 3.23
CCHCR1-217ENST00000503420 LRRIQ1Q96JM4 1722 aa35.22■■■■□ 3.23
CCHCR1-217ENST00000503420 DENND4BO75064 1496 aaPredicted RBP35.22■■■■□ 3.23
CCHCR1-217ENST00000503420 ADGRL1O94910 1474 aa35.13■■■■□ 3.21
CCHCR1-217ENST00000503420 MYO5CQ9NQX4 1742 aa35.12■■■■□ 3.21
CCHCR1-217ENST00000503420 SCAPERQ9BY12 1400 aa35.1■■■■□ 3.21
CCHCR1-217ENST00000503420 ARHGAP5Q13017 1502 aa35.08■■■■□ 3.21
CCHCR1-217ENST00000503420 MTUS2Q5JR59 1369 aa35.04■■■■□ 3.2
CCHCR1-217ENST00000503420 FRMPD1Q5SYB0 1578 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms