RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
MBD4-204ENST00000503197 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
MBD4-204ENST00000503197 NUP160Q12769 1436 aa24.51■■□□□ 1.51
MBD4-204ENST00000503197 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.5
MBD4-204ENST00000503197 IQGAP2Q13576 1575 aa24.44■■□□□ 1.5
MBD4-204ENST00000503197 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
MBD4-204ENST00000503197 CLIP1P30622 1438 aa24.43■■□□□ 1.5
MBD4-204ENST00000503197 ARHGAP35Q9NRY4 1499 aa24.35■■□□□ 1.49
MBD4-204ENST00000503197 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.48
MBD4-204ENST00000503197 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
MBD4-204ENST00000503197 SAMD9Q5K651 1589 aa24.3■■□□□ 1.48
MBD4-204ENST00000503197 EFCAB5A4FU69 1503 aa24.29■■□□□ 1.48
MBD4-204ENST00000503197 ARAP1Q96P48 1450 aa24.28■■□□□ 1.48
MBD4-204ENST00000503197 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
MBD4-204ENST00000503197 DISP1Q96F81 1524 aa24.24■■□□□ 1.47
MBD4-204ENST00000503197 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
MBD4-204ENST00000503197 OSCARQ8IYS5 282 aa24.23■■□□□ 1.47
MBD4-204ENST00000503197 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
MBD4-204ENST00000503197 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
MBD4-204ENST00000503197 KIAA0556O60303 1618 aa24.2■■□□□ 1.46
MBD4-204ENST00000503197 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
MBD4-204ENST00000503197 PRG4Q92954 1404 aaPredicted RBP24.15■■□□□ 1.46
MBD4-204ENST00000503197 CARMIL2Q6F5E8 1435 aa24.12■■□□□ 1.45
MBD4-204ENST00000503197 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
MBD4-204ENST00000503197 FMN1Q68DA7 1419 aa24.06■■□□□ 1.44
MBD4-204ENST00000503197 PCF11O94913 1555 aaKnown RBP24.02■■□□□ 1.44
MBD4-204ENST00000503197 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
MBD4-204ENST00000503197 CASKIN1Q8WXD9 1431 aa23.98■■□□□ 1.43
MBD4-204ENST00000503197 FYCO1Q9BQS8 1478 aa23.96■■□□□ 1.43
MBD4-204ENST00000503197 PTPRGP23470 1445 aa23.94■■□□□ 1.42
MBD4-204ENST00000503197 PLB1Q6P1J6 1458 aa23.92■■□□□ 1.42
MBD4-204ENST00000503197 RAPGEF6Q8TEU7 1601 aa23.9■■□□□ 1.42
MBD4-204ENST00000503197 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.42
MBD4-204ENST00000503197 ABCA8O94911 1581 aa23.89■■□□□ 1.42
MBD4-204ENST00000503197 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
MBD4-204ENST00000503197 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
MBD4-204ENST00000503197 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
MBD4-204ENST00000503197 NUP153P49790 1475 aaKnown RBP23.85■■□□□ 1.41
MBD4-204ENST00000503197 TIAM1Q13009 1591 aa23.83■■□□□ 1.4
MBD4-204ENST00000503197 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
MBD4-204ENST00000503197 CFAP43Q8NDM7 1665 aa23.82■■□□□ 1.4
MBD4-204ENST00000503197 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
MBD4-204ENST00000503197 APLP2Q06481 763 aa23.81■■□□□ 1.4
MBD4-204ENST00000503197 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
MBD4-204ENST00000503197 EPRSP07814 1512 aaKnown RBP23.8■■□□□ 1.4
MBD4-204ENST00000503197 RIMBP3CA6NJZ7 1639 aa23.8■■□□□ 1.4
MBD4-204ENST00000503197 RIMBP3BA6NNM3 1639 aa23.8■■□□□ 1.4
MBD4-204ENST00000503197 RIMBP3Q9UFD9 1639 aa23.8■■□□□ 1.4
MBD4-204ENST00000503197 CDK13Q14004 1512 aaKnown RBP23.78■■□□□ 1.4
MBD4-204ENST00000503197 CCDC18Q5T9S5 1454 aa23.77■■□□□ 1.4
MBD4-204ENST00000503197 ABCC2Q92887 1545 aa23.77■■□□□ 1.39
MBD4-204ENST00000503197 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
MBD4-204ENST00000503197 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
MBD4-204ENST00000503197 UHRF1BP1LA0JNW5 1464 aa23.74■■□□□ 1.39
MBD4-204ENST00000503197 LRRC9Q6ZRR7 1453 aa23.72■■□□□ 1.39
MBD4-204ENST00000503197 ADCY10Q96PN6 1610 aa23.72■■□□□ 1.39
MBD4-204ENST00000503197 ATP10BO94823 1461 aa23.71■■□□□ 1.39
MBD4-204ENST00000503197 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
MBD4-204ENST00000503197 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
MBD4-204ENST00000503197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
MBD4-204ENST00000503197 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
MBD4-204ENST00000503197 ZCCHC11Q5TAX3 1644 aaKnown RBP23.62■■□□□ 1.37
MBD4-204ENST00000503197 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
MBD4-204ENST00000503197 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
MBD4-204ENST00000503197 EHBP1L1Q8N3D4 1523 aa23.61■■□□□ 1.37
MBD4-204ENST00000503197 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
MBD4-204ENST00000503197 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
MBD4-204ENST00000503197 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
MBD4-204ENST00000503197 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
MBD4-204ENST00000503197 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.35
MBD4-204ENST00000503197 NCOA2Q15596 1464 aa23.5■■□□□ 1.35
MBD4-204ENST00000503197 KIF14Q15058 1648 aa23.49■■□□□ 1.35
MBD4-204ENST00000503197 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
MBD4-204ENST00000503197 NPM1P06748 294 aaKnown RBP eCLIP23.44■■□□□ 1.34
MBD4-204ENST00000503197 ASXL2Q76L83 1435 aa23.43■■□□□ 1.34
MBD4-204ENST00000503197 WDR7Q9Y4E6 1490 aa23.42■■□□□ 1.34
MBD4-204ENST00000503197 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
MBD4-204ENST00000503197 ABCC10Q5T3U5 1492 aa23.4■■□□□ 1.34
MBD4-204ENST00000503197 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
MBD4-204ENST00000503197 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
MBD4-204ENST00000503197 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
MBD4-204ENST00000503197 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
MBD4-204ENST00000503197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.35■■□□□ 1.332e-7■■■□□ 19.1
MBD4-204ENST00000503197 TTC37Q6PGP7 1564 aa23.34■■□□□ 1.33
MBD4-204ENST00000503197 FGD6Q6ZV73 1430 aa23.33■■□□□ 1.33
MBD4-204ENST00000503197 CCNB3Q8WWL7 1395 aa23.33■■□□□ 1.32
MBD4-204ENST00000503197 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
MBD4-204ENST00000503197 CDC42BPAQ5VT25 1732 aa23.32■■□□□ 1.32
MBD4-204ENST00000503197 ITSN2Q9NZM3 1697 aa23.29■■□□□ 1.32
MBD4-204ENST00000503197 PCGF6Q9BYE7 350 aa23.29■■□□□ 1.32
MBD4-204ENST00000503197 MIA2Q96PC5 1412 aa23.27■■□□□ 1.32
MBD4-204ENST00000503197 ABCA9Q8IUA7 1624 aa23.27■■□□□ 1.32
MBD4-204ENST00000503197 PREX2Q70Z35 1606 aa23.25■■□□□ 1.31
MBD4-204ENST00000503197 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
MBD4-204ENST00000503197 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
MBD4-204ENST00000503197 MYO5CQ9NQX4 1742 aa23.24■■□□□ 1.31
MBD4-204ENST00000503197 TCOF1Q13428 1488 aaKnown RBP23.22■■□□□ 1.31
MBD4-204ENST00000503197 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
MBD4-204ENST00000503197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.21■■□□□ 1.31
MBD4-204ENST00000503197 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms