RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
USP46-204ENST00000503060 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
USP46-204ENST00000503060 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
USP46-204ENST00000503060 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
USP46-204ENST00000503060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
USP46-204ENST00000503060 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.4
USP46-204ENST00000503060 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
USP46-204ENST00000503060 KANK4Q5T7N3 995 aaPredicted RBP17.5■□□□□ 0.39
USP46-204ENST00000503060 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
USP46-204ENST00000503060 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
USP46-204ENST00000503060 WDR62O43379 1518 aa17.45■□□□□ 0.38
USP46-204ENST00000503060 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
USP46-204ENST00000503060 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
USP46-204ENST00000503060 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
USP46-204ENST00000503060 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
USP46-204ENST00000503060 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
USP46-204ENST00000503060 FHOD3Q2V2M9 1422 aa17.42■□□□□ 0.38
USP46-204ENST00000503060 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
USP46-204ENST00000503060 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
USP46-204ENST00000503060 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
USP46-204ENST00000503060 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
USP46-204ENST00000503060 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
USP46-204ENST00000503060 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
USP46-204ENST00000503060 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
USP46-204ENST00000503060 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
USP46-204ENST00000503060 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
USP46-204ENST00000503060 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
USP46-204ENST00000503060 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
USP46-204ENST00000503060 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
USP46-204ENST00000503060 CASKIN1Q8WXD9 1431 aa17.34■□□□□ 0.37
USP46-204ENST00000503060 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
USP46-204ENST00000503060 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
USP46-204ENST00000503060 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
USP46-204ENST00000503060 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
USP46-204ENST00000503060 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
USP46-204ENST00000503060 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
USP46-204ENST00000503060 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
USP46-204ENST00000503060 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
USP46-204ENST00000503060 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
USP46-204ENST00000503060 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
USP46-204ENST00000503060 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
USP46-204ENST00000503060 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
USP46-204ENST00000503060 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
USP46-204ENST00000503060 LRRIQ1Q96JM4 1722 aa17.17■□□□□ 0.34
USP46-204ENST00000503060 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
USP46-204ENST00000503060 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
USP46-204ENST00000503060 ITGAEP38570 1179 aa17.13■□□□□ 0.33
USP46-204ENST00000503060 DHX57Q6P158 1386 aaKnown RBP17.13■□□□□ 0.33
USP46-204ENST00000503060 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
USP46-204ENST00000503060 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
USP46-204ENST00000503060 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
USP46-204ENST00000503060 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
USP46-204ENST00000503060 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
USP46-204ENST00000503060 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
USP46-204ENST00000503060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
USP46-204ENST00000503060 EHBP1L1Q8N3D4 1523 aa17.09■□□□□ 0.33
USP46-204ENST00000503060 KIAA0556O60303 1618 aa17.07■□□□□ 0.32
USP46-204ENST00000503060 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
USP46-204ENST00000503060 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
USP46-204ENST00000503060 FGD6Q6ZV73 1430 aa17.06■□□□□ 0.32
USP46-204ENST00000503060 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
USP46-204ENST00000503060 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
USP46-204ENST00000503060 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
USP46-204ENST00000503060 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
USP46-204ENST00000503060 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
USP46-204ENST00000503060 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
USP46-204ENST00000503060 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
USP46-204ENST00000503060 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
USP46-204ENST00000503060 NUP160Q12769 1436 aa17.02■□□□□ 0.31
USP46-204ENST00000503060 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
USP46-204ENST00000503060 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
USP46-204ENST00000503060 FBLN2P98095 1184 aa17■□□□□ 0.31
USP46-204ENST00000503060 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
USP46-204ENST00000503060 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
USP46-204ENST00000503060 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
USP46-204ENST00000503060 HOMEZQ8IX15 550 aa16.97■□□□□ 0.31
USP46-204ENST00000503060 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.3
USP46-204ENST00000503060 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.3
USP46-204ENST00000503060 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
USP46-204ENST00000503060 KCNA4P22459 653 aa16.94■□□□□ 0.3
USP46-204ENST00000503060 PTPN23Q9H3S7 1636 aa16.93■□□□□ 0.3
USP46-204ENST00000503060 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
USP46-204ENST00000503060 JPH4Q96JJ6 628 aa16.92■□□□□ 0.3
USP46-204ENST00000503060 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
USP46-204ENST00000503060 MAPKBP1O60336 1514 aa16.92■□□□□ 0.3
USP46-204ENST00000503060 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
USP46-204ENST00000503060 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
USP46-204ENST00000503060 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
USP46-204ENST00000503060 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
USP46-204ENST00000503060 HFM1A2PYH4 1435 aa16.87■□□□□ 0.29
USP46-204ENST00000503060 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
USP46-204ENST00000503060 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
USP46-204ENST00000503060 NAIPQ13075 1403 aa16.82■□□□□ 0.28
USP46-204ENST00000503060 CHD1O14646 1710 aa16.81■□□□□ 0.28
USP46-204ENST00000503060 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
USP46-204ENST00000503060 TROQ12816 1431 aaPredicted RBP16.81■□□□□ 0.28
USP46-204ENST00000503060 ABCA8O94911 1581 aa16.8■□□□□ 0.28
USP46-204ENST00000503060 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
USP46-204ENST00000503060 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
USP46-204ENST00000503060 AKNAQ7Z591 1439 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms