RNA–Protein interactions for RNA: ENST00000500215.3

LINC02288-201, Transcript of long intergenic non-protein coding RNA 2288, humanhuman

TSL 2 BASIC

Gene LINC02288, Length 2,924 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02288-201ENST00000500215 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
LINC02288-201ENST00000500215 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
LINC02288-201ENST00000500215 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
LINC02288-201ENST00000500215 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
LINC02288-201ENST00000500215 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
LINC02288-201ENST00000500215 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
LINC02288-201ENST00000500215 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
LINC02288-201ENST00000500215 CTTNBP2Q8WZ74 1663 aa18.36■□□□□ 0.53
LINC02288-201ENST00000500215 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
LINC02288-201ENST00000500215 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
LINC02288-201ENST00000500215 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
LINC02288-201ENST00000500215 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
LINC02288-201ENST00000500215 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
LINC02288-201ENST00000500215 IQGAP2Q13576 1575 aa18.26■□□□□ 0.51
LINC02288-201ENST00000500215 CHD1O14646 1710 aa18.26■□□□□ 0.51
LINC02288-201ENST00000500215 APLP2Q06481 763 aa18.26■□□□□ 0.51
LINC02288-201ENST00000500215 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
LINC02288-201ENST00000500215 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
LINC02288-201ENST00000500215 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
LINC02288-201ENST00000500215 NUP160Q12769 1436 aa18.18■□□□□ 0.5
LINC02288-201ENST00000500215 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
LINC02288-201ENST00000500215 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
LINC02288-201ENST00000500215 SAMD9Q5K651 1589 aa18.14■□□□□ 0.5
LINC02288-201ENST00000500215 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
LINC02288-201ENST00000500215 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
LINC02288-201ENST00000500215 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
LINC02288-201ENST00000500215 KIAA0556O60303 1618 aa18.08■□□□□ 0.48
LINC02288-201ENST00000500215 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
LINC02288-201ENST00000500215 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
LINC02288-201ENST00000500215 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
LINC02288-201ENST00000500215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
LINC02288-201ENST00000500215 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
LINC02288-201ENST00000500215 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.48
LINC02288-201ENST00000500215 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
LINC02288-201ENST00000500215 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
LINC02288-201ENST00000500215 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
LINC02288-201ENST00000500215 TIAM1Q13009 1591 aa17.99■□□□□ 0.47
LINC02288-201ENST00000500215 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
LINC02288-201ENST00000500215 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
LINC02288-201ENST00000500215 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
LINC02288-201ENST00000500215 ITGAEP38570 1179 aa17.94■□□□□ 0.46
LINC02288-201ENST00000500215 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
LINC02288-201ENST00000500215 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
LINC02288-201ENST00000500215 PTPRGP23470 1445 aa17.93■□□□□ 0.46
LINC02288-201ENST00000500215 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
LINC02288-201ENST00000500215 NUP153P49790 1475 aaKnown RBP17.9■□□□□ 0.46
LINC02288-201ENST00000500215 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
LINC02288-201ENST00000500215 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
LINC02288-201ENST00000500215 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
LINC02288-201ENST00000500215 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
LINC02288-201ENST00000500215 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
LINC02288-201ENST00000500215 PHLDB1Q86UU1 1377 aa17.88■□□□□ 0.45
LINC02288-201ENST00000500215 HECW1Q76N89 1606 aa17.88■□□□□ 0.45
LINC02288-201ENST00000500215 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
LINC02288-201ENST00000500215 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
LINC02288-201ENST00000500215 CCDC18Q5T9S5 1454 aa17.79■□□□□ 0.44
LINC02288-201ENST00000500215 ABCA8O94911 1581 aa17.79■□□□□ 0.44
LINC02288-201ENST00000500215 ATP10BO94823 1461 aa17.77■□□□□ 0.44
LINC02288-201ENST00000500215 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
LINC02288-201ENST00000500215 UACAQ9BZF9 1416 aa17.77■□□□□ 0.44
LINC02288-201ENST00000500215 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
LINC02288-201ENST00000500215 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
LINC02288-201ENST00000500215 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
LINC02288-201ENST00000500215 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
LINC02288-201ENST00000500215 CDK11AQ9UQ88 783 aaPredicted RBP17.72■□□□□ 0.43
LINC02288-201ENST00000500215 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
LINC02288-201ENST00000500215 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
LINC02288-201ENST00000500215 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
LINC02288-201ENST00000500215 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
LINC02288-201ENST00000500215 KIF14Q15058 1648 aa17.69■□□□□ 0.42
LINC02288-201ENST00000500215 ZNF644Q9H582 1327 aaPredicted RBP17.68■□□□□ 0.42
LINC02288-201ENST00000500215 ABCC2Q92887 1545 aa17.68■□□□□ 0.42
LINC02288-201ENST00000500215 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
LINC02288-201ENST00000500215 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
LINC02288-201ENST00000500215 ARHGEF11O15085 1522 aa17.65■□□□□ 0.42
LINC02288-201ENST00000500215 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
LINC02288-201ENST00000500215 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
LINC02288-201ENST00000500215 ADCY10Q96PN6 1610 aa17.63■□□□□ 0.41
LINC02288-201ENST00000500215 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
LINC02288-201ENST00000500215 ZCCHC11Q5TAX3 1644 aaKnown RBP17.6■□□□□ 0.41
LINC02288-201ENST00000500215 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
LINC02288-201ENST00000500215 PTPRKQ15262 1439 aa17.56■□□□□ 0.4
LINC02288-201ENST00000500215 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
LINC02288-201ENST00000500215 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
LINC02288-201ENST00000500215 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
LINC02288-201ENST00000500215 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
LINC02288-201ENST00000500215 HRCP23327 699 aa17.55■□□□□ 0.4
LINC02288-201ENST00000500215 KDM5BQ9UGL1 1544 aa17.55■□□□□ 0.4
LINC02288-201ENST00000500215 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
LINC02288-201ENST00000500215 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
LINC02288-201ENST00000500215 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC02288-201ENST00000500215 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
LINC02288-201ENST00000500215 TTC37Q6PGP7 1564 aa17.51■□□□□ 0.39
LINC02288-201ENST00000500215 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
LINC02288-201ENST00000500215 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
LINC02288-201ENST00000500215 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
LINC02288-201ENST00000500215 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
LINC02288-201ENST00000500215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC02288-201ENST00000500215 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
LINC02288-201ENST00000500215 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms