RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
PARP1-209ENST00000498787 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
PARP1-209ENST00000498787 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
PARP1-209ENST00000498787 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
PARP1-209ENST00000498787 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
PARP1-209ENST00000498787 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
PARP1-209ENST00000498787 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
PARP1-209ENST00000498787 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
PARP1-209ENST00000498787 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
PARP1-209ENST00000498787 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
PARP1-209ENST00000498787 IQGAP2Q13576 1575 aa22.39■■□□□ 1.18
PARP1-209ENST00000498787 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
PARP1-209ENST00000498787 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
PARP1-209ENST00000498787 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
PARP1-209ENST00000498787 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
PARP1-209ENST00000498787 FBLN2P98095 1184 aa22.32■■□□□ 1.16
PARP1-209ENST00000498787 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
PARP1-209ENST00000498787 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
PARP1-209ENST00000498787 NUP160Q12769 1436 aa22.3■■□□□ 1.16
PARP1-209ENST00000498787 CASKIN1Q8WXD9 1431 aa22.3■■□□□ 1.16
PARP1-209ENST00000498787 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
PARP1-209ENST00000498787 CARMIL2Q6F5E8 1435 aa22.21■■□□□ 1.15
PARP1-209ENST00000498787 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
PARP1-209ENST00000498787 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
PARP1-209ENST00000498787 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
PARP1-209ENST00000498787 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
PARP1-209ENST00000498787 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
PARP1-209ENST00000498787 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
PARP1-209ENST00000498787 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
PARP1-209ENST00000498787 KIAA0556O60303 1618 aa22.13■■□□□ 1.13
PARP1-209ENST00000498787 DISP1Q96F81 1524 aa22.12■■□□□ 1.13
PARP1-209ENST00000498787 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
PARP1-209ENST00000498787 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
PARP1-209ENST00000498787 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
PARP1-209ENST00000498787 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
PARP1-209ENST00000498787 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
PARP1-209ENST00000498787 CHD1O14646 1710 aa22.02■■□□□ 1.12
PARP1-209ENST00000498787 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
PARP1-209ENST00000498787 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
PARP1-209ENST00000498787 HRCP23327 699 aa21.98■■□□□ 1.11
PARP1-209ENST00000498787 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
PARP1-209ENST00000498787 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
PARP1-209ENST00000498787 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
PARP1-209ENST00000498787 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
PARP1-209ENST00000498787 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
PARP1-209ENST00000498787 RAPGEF6Q8TEU7 1601 aa21.93■■□□□ 1.1
PARP1-209ENST00000498787 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
PARP1-209ENST00000498787 PTPRGP23470 1445 aa21.91■■□□□ 1.1
PARP1-209ENST00000498787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
PARP1-209ENST00000498787 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
PARP1-209ENST00000498787 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
PARP1-209ENST00000498787 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
PARP1-209ENST00000498787 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
PARP1-209ENST00000498787 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
PARP1-209ENST00000498787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
PARP1-209ENST00000498787 ABCA8O94911 1581 aa21.82■■□□□ 1.08
PARP1-209ENST00000498787 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
PARP1-209ENST00000498787 PLB1Q6P1J6 1458 aa21.82■■□□□ 1.08
PARP1-209ENST00000498787 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
PARP1-209ENST00000498787 LRRIQ1Q96JM4 1722 aa21.8■■□□□ 1.08
PARP1-209ENST00000498787 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
PARP1-209ENST00000498787 MYOM3Q5VTT5 1437 aa21.79■■□□□ 1.08
PARP1-209ENST00000498787 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
PARP1-209ENST00000498787 UACAQ9BZF9 1416 aa21.77■■□□□ 1.08
PARP1-209ENST00000498787 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
PARP1-209ENST00000498787 PLEKHD1A6NEE1 506 aa21.76■■□□□ 1.07
PARP1-209ENST00000498787 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
PARP1-209ENST00000498787 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
PARP1-209ENST00000498787 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
PARP1-209ENST00000498787 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
PARP1-209ENST00000498787 MAGI3Q5TCQ9 1506 aa21.73■■□□□ 1.07
PARP1-209ENST00000498787 ARID3CA6NKF2 412 aa21.71■■□□□ 1.07
PARP1-209ENST00000498787 ATP10BO94823 1461 aa21.7■■□□□ 1.06
PARP1-209ENST00000498787 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
PARP1-209ENST00000498787 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
PARP1-209ENST00000498787 ITGAEP38570 1179 aa21.64■■□□□ 1.05
PARP1-209ENST00000498787 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.05
PARP1-209ENST00000498787 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
PARP1-209ENST00000498787 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
PARP1-209ENST00000498787 CLSPNQ9HAW4 1339 aa21.59■■□□□ 1.05
PARP1-209ENST00000498787 PTPN23Q9H3S7 1636 aa21.59■■□□□ 1.05
PARP1-209ENST00000498787 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
PARP1-209ENST00000498787 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
PARP1-209ENST00000498787 KIF14Q15058 1648 aa21.57■■□□□ 1.04
PARP1-209ENST00000498787 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
PARP1-209ENST00000498787 ITSN2Q9NZM3 1697 aa21.53■■□□□ 1.04
PARP1-209ENST00000498787 KDM5BQ9UGL1 1544 aa21.53■■□□□ 1.04
PARP1-209ENST00000498787 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
PARP1-209ENST00000498787 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
PARP1-209ENST00000498787 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
PARP1-209ENST00000498787 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
PARP1-209ENST00000498787 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
PARP1-209ENST00000498787 NPM1P06748 294 aaKnown RBP eCLIP21.45■■□□□ 1.02
PARP1-209ENST00000498787 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
PARP1-209ENST00000498787 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
PARP1-209ENST00000498787 DHX57Q6P158 1386 aaKnown RBP21.43■■□□□ 1.02
PARP1-209ENST00000498787 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
PARP1-209ENST00000498787 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
PARP1-209ENST00000498787 DAPK1P53355 1430 aa21.4■■□□□ 1.02
PARP1-209ENST00000498787 PTPRKQ15262 1439 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms