RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 RUSC2Q8N2Y8 1516 aa28.95■■■□□ 2.23
MTA1-216ENST00000498644 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
MTA1-216ENST00000498644 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.21
MTA1-216ENST00000498644 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
MTA1-216ENST00000498644 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
MTA1-216ENST00000498644 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
MTA1-216ENST00000498644 NPM1P06748 294 aaKnown RBP eCLIP28.6■■■□□ 2.17
MTA1-216ENST00000498644 CARMIL2Q6F5E8 1435 aa28.6■■■□□ 2.17
MTA1-216ENST00000498644 ADCY10Q96PN6 1610 aa28.57■■■□□ 2.16
MTA1-216ENST00000498644 PTPRGP23470 1445 aa28.55■■■□□ 2.16
MTA1-216ENST00000498644 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
MTA1-216ENST00000498644 MAPKBP1O60336 1514 aa28.5■■■□□ 2.15
MTA1-216ENST00000498644 KIF13AQ9H1H9 1805 aa28.5■■■□□ 2.15
MTA1-216ENST00000498644 UGGT2Q9NYU1 1516 aa28.47■■■□□ 2.15
MTA1-216ENST00000498644 DISP1Q96F81 1524 aa28.46■■■□□ 2.15
MTA1-216ENST00000498644 ABCC10Q5T3U5 1492 aa28.44■■■□□ 2.14
MTA1-216ENST00000498644 PRXQ9BXM0 1461 aa28.43■■■□□ 2.14
MTA1-216ENST00000498644 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
MTA1-216ENST00000498644 FAM69CQ0P6D2 419 aa28.4■■■□□ 2.14
MTA1-216ENST00000498644 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
MTA1-216ENST00000498644 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
MTA1-216ENST00000498644 UHRF1BP1LA0JNW5 1464 aa28.35■■■□□ 2.13
MTA1-216ENST00000498644 DIP2BQ9P265 1576 aa28.35■■■□□ 2.13
MTA1-216ENST00000498644 UACAQ9BZF9 1416 aa28.35■■■□□ 2.13
MTA1-216ENST00000498644 KIAA0556O60303 1618 aa28.34■■■□□ 2.13
MTA1-216ENST00000498644 CSRNP3Q8WYN3 585 aa28.3■■■□□ 2.12
MTA1-216ENST00000498644 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
MTA1-216ENST00000498644 EEA1Q15075 1411 aa28.25■■■□□ 2.11
MTA1-216ENST00000498644 PLB1Q6P1J6 1458 aa28.23■■■□□ 2.11
MTA1-216ENST00000498644 ASXL2Q76L83 1435 aa28.22■■■□□ 2.11
MTA1-216ENST00000498644 KDM5BQ9UGL1 1544 aa28.22■■■□□ 2.11
MTA1-216ENST00000498644 GLI2P10070 1586 aa28.14■■■□□ 2.1
MTA1-216ENST00000498644 TSPOAP1O95153 1857 aa28.13■■■□□ 2.09
MTA1-216ENST00000498644 ZCCHC11Q5TAX3 1644 aaKnown RBP28.13■■■□□ 2.09
MTA1-216ENST00000498644 ABCA8O94911 1581 aa28.09■■■□□ 2.09
MTA1-216ENST00000498644 FAM9AQ8IZU1 332 aaPredicted RBP28.07■■■□□ 2.08
MTA1-216ENST00000498644 EPRSP07814 1512 aaKnown RBP28.06■■■□□ 2.08
MTA1-216ENST00000498644 KDM6BO15054 1643 aa28.03■■■□□ 2.08
MTA1-216ENST00000498644 CHIC1Q5VXU3 224 aa28.01■■■□□ 2.07
MTA1-216ENST00000498644 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
MTA1-216ENST00000498644 SAMD9Q5K651 1589 aa28■■■□□ 2.07
MTA1-216ENST00000498644 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
MTA1-216ENST00000498644 PPRC1Q5VV67 1664 aaKnown RBP27.99■■■□□ 2.07
MTA1-216ENST00000498644 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
MTA1-216ENST00000498644 MAP3K4Q9Y6R4 1608 aa27.97■■■□□ 2.07
MTA1-216ENST00000498644 KIF21BO75037 1637 aa27.96■■■□□ 2.07
MTA1-216ENST00000498644 TEX14Q8IWB6 1497 aa27.89■■■□□ 2.06
MTA1-216ENST00000498644 KCNH8Q96L42 1107 aa27.86■■■□□ 2.05
MTA1-216ENST00000498644 ATP10BO94823 1461 aa27.86■■■□□ 2.05
MTA1-216ENST00000498644 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
MTA1-216ENST00000498644 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
MTA1-216ENST00000498644 CFAP43Q8NDM7 1665 aa27.82■■■□□ 2.04
MTA1-216ENST00000498644 CD109Q6YHK3 1445 aa27.81■■■□□ 2.04
MTA1-216ENST00000498644 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
MTA1-216ENST00000498644 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
MTA1-216ENST00000498644 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
MTA1-216ENST00000498644 MAGI3Q5TCQ9 1506 aa27.78■■■□□ 2.04
MTA1-216ENST00000498644 COL17A1Q9UMD9 1497 aaPredicted RBP27.77■■■□□ 2.04
MTA1-216ENST00000498644 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
MTA1-216ENST00000498644 NUP153P49790 1475 aaKnown RBP27.73■■■□□ 2.03
MTA1-216ENST00000498644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.7■■■□□ 2.02
MTA1-216ENST00000498644 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.02
MTA1-216ENST00000498644 EHMT2Q96KQ7 1210 aa27.69■■■□□ 2.02
MTA1-216ENST00000498644 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
MTA1-216ENST00000498644 KDM4FA0A1W2PPD8 638 aa27.63■■■□□ 2.01
MTA1-216ENST00000498644 PLEKHD1A6NEE1 506 aa27.6■■■□□ 2.01
MTA1-216ENST00000498644 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
MTA1-216ENST00000498644 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
MTA1-216ENST00000498644 ARAP3Q8WWN8 1544 aa27.57■■■□□ 2
MTA1-216ENST00000498644 FMN1Q68DA7 1419 aa27.56■■■□□ 2
MTA1-216ENST00000498644 NEO1Q92859 1461 aa27.5■■□□□ 1.99
MTA1-216ENST00000498644 ADGRL1O94910 1474 aa27.47■■□□□ 1.99
MTA1-216ENST00000498644 CDK13Q14004 1512 aaKnown RBP27.46■■□□□ 1.99
MTA1-216ENST00000498644 HECW1Q76N89 1606 aa27.45■■□□□ 1.99
MTA1-216ENST00000498644 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
MTA1-216ENST00000498644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.43■■□□□ 1.982e-6■■■■■ 51.7
MTA1-216ENST00000498644 CDK11AQ9UQ88 783 aaPredicted RBP27.39■■□□□ 1.98
MTA1-216ENST00000498644 RAPGEF3O95398 923 aa27.38■■□□□ 1.97
MTA1-216ENST00000498644 TTC37Q6PGP7 1564 aa27.36■■□□□ 1.97
MTA1-216ENST00000498644 CFAP74Q9C0B2 1584 aa27.35■■□□□ 1.97
MTA1-216ENST00000498644 FANCAO15360 1455 aa27.35■■□□□ 1.97
MTA1-216ENST00000498644 AKNAQ7Z591 1439 aa27.33■■□□□ 1.97
MTA1-216ENST00000498644 FRMPD1Q5SYB0 1578 aa27.3■■□□□ 1.96
MTA1-216ENST00000498644 PLCH2O75038 1416 aa27.29■■□□□ 1.96
MTA1-216ENST00000498644 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
MTA1-216ENST00000498644 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
MTA1-216ENST00000498644 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
MTA1-216ENST00000498644 TROQ12816 1431 aaPredicted RBP27.26■■□□□ 1.95
MTA1-216ENST00000498644 RICTORQ6R327 1708 aa27.25■■□□□ 1.95
MTA1-216ENST00000498644 CLIP1P30622 1438 aa27.24■■□□□ 1.95
MTA1-216ENST00000498644 CCDC18Q5T9S5 1454 aa27.23■■□□□ 1.95
MTA1-216ENST00000498644 KIF14Q15058 1648 aa27.23■■□□□ 1.95
MTA1-216ENST00000498644 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
MTA1-216ENST00000498644 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
MTA1-216ENST00000498644 EFCAB2Q5VUJ9 269 aa27.2■■□□□ 1.94
MTA1-216ENST00000498644 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
MTA1-216ENST00000498644 ZMYM4Q5VZL5 1548 aa27.16■■□□□ 1.94
MTA1-216ENST00000498644 SCAPERQ9BY12 1400 aa27.16■■□□□ 1.94
MTA1-216ENST00000498644 ARHGEF40Q8TER5 1519 aa27.15■■□□□ 1.94
MTA1-216ENST00000498644 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms