RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 CUL7Q14999 1698 aa25.01■■□□□ 1.59
HDLBP-247ENST00000498595 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
HDLBP-247ENST00000498595 KIAA0586Q9BVV6 1533 aa24.93■■□□□ 1.58
HDLBP-247ENST00000498595 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
HDLBP-247ENST00000498595 NPM1P06748 294 aaKnown RBP eCLIP24.87■■□□□ 1.57
HDLBP-247ENST00000498595 CARMIL2Q6F5E8 1435 aa24.76■■□□□ 1.55
HDLBP-247ENST00000498595 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
HDLBP-247ENST00000498595 PTPRGP23470 1445 aa24.71■■□□□ 1.55
HDLBP-247ENST00000498595 RAPGEF2Q9Y4G8 1499 aa24.7■■□□□ 1.55
HDLBP-247ENST00000498595 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
HDLBP-247ENST00000498595 ADCY10Q96PN6 1610 aa24.68■■□□□ 1.54
HDLBP-247ENST00000498595 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
HDLBP-247ENST00000498595 MAPKBP1O60336 1514 aa24.67■■□□□ 1.54
HDLBP-247ENST00000498595 FAM69CQ0P6D2 419 aa24.67■■□□□ 1.54
HDLBP-247ENST00000498595 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.54
HDLBP-247ENST00000498595 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
HDLBP-247ENST00000498595 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
HDLBP-247ENST00000498595 DIP2BQ9P265 1576 aa24.55■■□□□ 1.52
HDLBP-247ENST00000498595 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
HDLBP-247ENST00000498595 UGGT2Q9NYU1 1516 aa24.54■■□□□ 1.52
HDLBP-247ENST00000498595 ABCC2Q92887 1545 aa24.53■■□□□ 1.52
HDLBP-247ENST00000498595 UACAQ9BZF9 1416 aa24.52■■□□□ 1.52
HDLBP-247ENST00000498595 UHRF1BP1LA0JNW5 1464 aa24.49■■□□□ 1.51
HDLBP-247ENST00000498595 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
HDLBP-247ENST00000498595 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.51
HDLBP-247ENST00000498595 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
HDLBP-247ENST00000498595 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
HDLBP-247ENST00000498595 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
HDLBP-247ENST00000498595 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
HDLBP-247ENST00000498595 FAM9AQ8IZU1 332 aaPredicted RBP24.39■■□□□ 1.49
HDLBP-247ENST00000498595 KDM5BQ9UGL1 1544 aa24.36■■□□□ 1.49
HDLBP-247ENST00000498595 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
HDLBP-247ENST00000498595 KDM6BO15054 1643 aa24.35■■□□□ 1.49
HDLBP-247ENST00000498595 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
HDLBP-247ENST00000498595 GLI2P10070 1586 aa24.33■■□□□ 1.48
HDLBP-247ENST00000498595 ZCCHC11Q5TAX3 1644 aaKnown RBP24.3■■□□□ 1.48
HDLBP-247ENST00000498595 EEA1Q15075 1411 aa24.29■■□□□ 1.48
HDLBP-247ENST00000498595 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
HDLBP-247ENST00000498595 WDR7Q9Y4E6 1490 aa24.23■■□□□ 1.47
HDLBP-247ENST00000498595 ABCA8O94911 1581 aa24.21■■□□□ 1.47
HDLBP-247ENST00000498595 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
HDLBP-247ENST00000498595 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
HDLBP-247ENST00000498595 MAP3K4Q9Y6R4 1608 aa24.17■■□□□ 1.46
HDLBP-247ENST00000498595 PPRC1Q5VV67 1664 aaKnown RBP24.15■■□□□ 1.46
HDLBP-247ENST00000498595 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
HDLBP-247ENST00000498595 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
HDLBP-247ENST00000498595 SAMD9Q5K651 1589 aa24.09■■□□□ 1.45
HDLBP-247ENST00000498595 ARID3CA6NKF2 412 aa24.09■■□□□ 1.45
HDLBP-247ENST00000498595 CD109Q6YHK3 1445 aa24.09■■□□□ 1.45
HDLBP-247ENST00000498595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.04■■□□□ 1.44
HDLBP-247ENST00000498595 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
HDLBP-247ENST00000498595 CFAP43Q8NDM7 1665 aa24.04■■□□□ 1.44
HDLBP-247ENST00000498595 ATP10BO94823 1461 aa24.03■■□□□ 1.44
HDLBP-247ENST00000498595 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
HDLBP-247ENST00000498595 COL17A1Q9UMD9 1497 aaPredicted RBP24.01■■□□□ 1.43
HDLBP-247ENST00000498595 KIF21BO75037 1637 aa24.01■■□□□ 1.43
HDLBP-247ENST00000498595 RAPGEF6Q8TEU7 1601 aa24■■□□□ 1.43
HDLBP-247ENST00000498595 KDM4FA0A1W2PPD8 638 aa24■■□□□ 1.43
HDLBP-247ENST00000498595 FHOD3Q2V2M9 1422 aa23.98■■□□□ 1.43
HDLBP-247ENST00000498595 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
HDLBP-247ENST00000498595 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.43
HDLBP-247ENST00000498595 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
HDLBP-247ENST00000498595 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
HDLBP-247ENST00000498595 NUP153P49790 1475 aaKnown RBP23.91■■□□□ 1.42
HDLBP-247ENST00000498595 ADGRL1O94910 1474 aa23.88■■□□□ 1.41
HDLBP-247ENST00000498595 PLEKHD1A6NEE1 506 aa23.88■■□□□ 1.41
HDLBP-247ENST00000498595 PHLDB1Q86UU1 1377 aa23.88■■□□□ 1.41
HDLBP-247ENST00000498595 ABCA9Q8IUA7 1624 aa23.87■■□□□ 1.41
HDLBP-247ENST00000498595 ARAP3Q8WWN8 1544 aa23.83■■□□□ 1.41
HDLBP-247ENST00000498595 NEO1Q92859 1461 aa23.8■■□□□ 1.4
HDLBP-247ENST00000498595 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
HDLBP-247ENST00000498595 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
HDLBP-247ENST00000498595 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
HDLBP-247ENST00000498595 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.38
HDLBP-247ENST00000498595 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
HDLBP-247ENST00000498595 CDK13Q14004 1512 aaKnown RBP23.69■■□□□ 1.38
HDLBP-247ENST00000498595 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
HDLBP-247ENST00000498595 CFAP74Q9C0B2 1584 aa23.66■■□□□ 1.38
HDLBP-247ENST00000498595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.66■■□□□ 1.38
HDLBP-247ENST00000498595 FANCAO15360 1455 aa23.65■■□□□ 1.38
HDLBP-247ENST00000498595 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.38
HDLBP-247ENST00000498595 AKNAQ7Z591 1439 aa23.64■■□□□ 1.37
HDLBP-247ENST00000498595 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
HDLBP-247ENST00000498595 ARID4BQ4LE39 1312 aaPredicted RBP23.6■■□□□ 1.37
HDLBP-247ENST00000498595 FRMPD1Q5SYB0 1578 aa23.57■■□□□ 1.36
HDLBP-247ENST00000498595 CLIP1P30622 1438 aa23.57■■□□□ 1.36
HDLBP-247ENST00000498595 PLCH2O75038 1416 aa23.55■■□□□ 1.36
HDLBP-247ENST00000498595 EFCAB2Q5VUJ9 269 aa23.53■■□□□ 1.36
HDLBP-247ENST00000498595 TROQ12816 1431 aaPredicted RBP23.52■■□□□ 1.36
HDLBP-247ENST00000498595 ARHGEF40Q8TER5 1519 aa23.52■■□□□ 1.36
HDLBP-247ENST00000498595 KIF14Q15058 1648 aa23.51■■□□□ 1.35
HDLBP-247ENST00000498595 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
HDLBP-247ENST00000498595 SCAPERQ9BY12 1400 aa23.5■■□□□ 1.35
HDLBP-247ENST00000498595 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
HDLBP-247ENST00000498595 CASKIN1Q8WXD9 1431 aa23.49■■□□□ 1.35
HDLBP-247ENST00000498595 CCDC18Q5T9S5 1454 aa23.49■■□□□ 1.35
HDLBP-247ENST00000498595 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
HDLBP-247ENST00000498595 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
HDLBP-247ENST00000498595 POGZQ7Z3K3 1410 aa23.46■■□□□ 1.35
HDLBP-247ENST00000498595 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms