RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PRG4Q92954 1404 aaPredicted RBP27.63■■■□□ 2.01
NR1H3-227ENST00000498548 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
NR1H3-227ENST00000498548 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
NR1H3-227ENST00000498548 KIAA0586Q9BVV6 1533 aa27.52■■■□□ 2
NR1H3-227ENST00000498548 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
NR1H3-227ENST00000498548 TTBK1Q5TCY1 1321 aaPredicted RBP27.36■■□□□ 1.97
NR1H3-227ENST00000498548 IQGAP2Q13576 1575 aa27.32■■□□□ 1.96
NR1H3-227ENST00000498548 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
NR1H3-227ENST00000498548 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
NR1H3-227ENST00000498548 PTPRGP23470 1445 aa27.24■■□□□ 1.95
NR1H3-227ENST00000498548 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
NR1H3-227ENST00000498548 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
NR1H3-227ENST00000498548 DISP1Q96F81 1524 aa27.19■■□□□ 1.94
NR1H3-227ENST00000498548 PRXQ9BXM0 1461 aa27.19■■□□□ 1.94
NR1H3-227ENST00000498548 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
NR1H3-227ENST00000498548 UGGT2Q9NYU1 1516 aa27.16■■□□□ 1.94
NR1H3-227ENST00000498548 CTTNBP2Q8WZ74 1663 aa27.15■■□□□ 1.94
NR1H3-227ENST00000498548 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
NR1H3-227ENST00000498548 FAM69CQ0P6D2 419 aa27.1■■□□□ 1.93
NR1H3-227ENST00000498548 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
NR1H3-227ENST00000498548 MAPKBP1O60336 1514 aa27.08■■□□□ 1.93
NR1H3-227ENST00000498548 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
NR1H3-227ENST00000498548 ABCC10Q5T3U5 1492 aa27.05■■□□□ 1.92
NR1H3-227ENST00000498548 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
NR1H3-227ENST00000498548 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
NR1H3-227ENST00000498548 ABCC2Q92887 1545 aa27■■□□□ 1.91
NR1H3-227ENST00000498548 DIP2BQ9P265 1576 aa27■■□□□ 1.91
NR1H3-227ENST00000498548 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
NR1H3-227ENST00000498548 EEA1Q15075 1411 aa26.97■■□□□ 1.91
NR1H3-227ENST00000498548 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
NR1H3-227ENST00000498548 P3H3Q8IVL6 736 aa26.95■■□□□ 1.9
NR1H3-227ENST00000498548 TSPOAP1O95153 1857 aa26.91■■□□□ 1.9
NR1H3-227ENST00000498548 ASXL2Q76L83 1435 aa26.91■■□□□ 1.9
NR1H3-227ENST00000498548 PLB1Q6P1J6 1458 aa26.9■■□□□ 1.9
NR1H3-227ENST00000498548 RANGAP1P46060 587 aaPredicted RBP26.89■■□□□ 1.9
NR1H3-227ENST00000498548 KDM5BQ9UGL1 1544 aa26.87■■□□□ 1.89
NR1H3-227ENST00000498548 ZCCHC11Q5TAX3 1644 aaKnown RBP26.87■■□□□ 1.89
NR1H3-227ENST00000498548 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
NR1H3-227ENST00000498548 ABCA8O94911 1581 aa26.81■■□□□ 1.88
NR1H3-227ENST00000498548 KIF21BO75037 1637 aa26.76■■□□□ 1.87
NR1H3-227ENST00000498548 ARID3CA6NKF2 412 aa26.76■■□□□ 1.87
NR1H3-227ENST00000498548 SAMD9Q5K651 1589 aa26.75■■□□□ 1.87
NR1H3-227ENST00000498548 GLI2P10070 1586 aa26.75■■□□□ 1.87
NR1H3-227ENST00000498548 EPRSP07814 1512 aaKnown RBP26.75■■□□□ 1.87
NR1H3-227ENST00000498548 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.86
NR1H3-227ENST00000498548 KCNH8Q96L42 1107 aa26.69■■□□□ 1.86
NR1H3-227ENST00000498548 KDM6BO15054 1643 aa26.68■■□□□ 1.86
NR1H3-227ENST00000498548 WDR7Q9Y4E6 1490 aa26.68■■□□□ 1.86
NR1H3-227ENST00000498548 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
NR1H3-227ENST00000498548 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
NR1H3-227ENST00000498548 MAP3K4Q9Y6R4 1608 aa26.64■■□□□ 1.85
NR1H3-227ENST00000498548 ATP10BO94823 1461 aa26.63■■□□□ 1.85
NR1H3-227ENST00000498548 RAPGEF6Q8TEU7 1601 aa26.61■■□□□ 1.85
NR1H3-227ENST00000498548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.57■■□□□ 1.84
NR1H3-227ENST00000498548 HNRNPUL2Q1KMD3 747 aaKnown RBP26.57■■□□□ 1.84
NR1H3-227ENST00000498548 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
NR1H3-227ENST00000498548 EFCAB5A4FU69 1503 aa26.53■■□□□ 1.84
NR1H3-227ENST00000498548 CD109Q6YHK3 1445 aa26.52■■□□□ 1.84
NR1H3-227ENST00000498548 COL17A1Q9UMD9 1497 aaPredicted RBP26.51■■□□□ 1.83
NR1H3-227ENST00000498548 NUP153P49790 1475 aaKnown RBP26.5■■□□□ 1.83
NR1H3-227ENST00000498548 TEX14Q8IWB6 1497 aa26.5■■□□□ 1.83
NR1H3-227ENST00000498548 CFAP43Q8NDM7 1665 aa26.49■■□□□ 1.83
NR1H3-227ENST00000498548 MAGI3Q5TCQ9 1506 aa26.43■■□□□ 1.82
NR1H3-227ENST00000498548 ARHGAP35Q9NRY4 1499 aa26.42■■□□□ 1.82
NR1H3-227ENST00000498548 ATP1B4Q9UN42 357 aaPredicted RBP26.41■■□□□ 1.82
NR1H3-227ENST00000498548 PLEKHD1A6NEE1 506 aa26.37■■□□□ 1.81
NR1H3-227ENST00000498548 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
NR1H3-227ENST00000498548 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
NR1H3-227ENST00000498548 KDM4FA0A1W2PPD8 638 aa26.33■■□□□ 1.81
NR1H3-227ENST00000498548 FMN1Q68DA7 1419 aa26.31■■□□□ 1.8
NR1H3-227ENST00000498548 HECW1Q76N89 1606 aa26.25■■□□□ 1.79
NR1H3-227ENST00000498548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.21■■□□□ 1.79
NR1H3-227ENST00000498548 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.79
NR1H3-227ENST00000498548 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
NR1H3-227ENST00000498548 LRRIQ1Q96JM4 1722 aa26.18■■□□□ 1.78
NR1H3-227ENST00000498548 TTC37Q6PGP7 1564 aa26.17■■□□□ 1.78
NR1H3-227ENST00000498548 PHLDB1Q86UU1 1377 aa26.16■■□□□ 1.78
NR1H3-227ENST00000498548 NEO1Q92859 1461 aa26.16■■□□□ 1.78
NR1H3-227ENST00000498548 ADGRL1O94910 1474 aa26.15■■□□□ 1.78
NR1H3-227ENST00000498548 CLIP1P30622 1438 aa26.14■■□□□ 1.77
NR1H3-227ENST00000498548 CDK11AQ9UQ88 783 aaPredicted RBP26.13■■□□□ 1.77
NR1H3-227ENST00000498548 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
NR1H3-227ENST00000498548 AKNAQ7Z591 1439 aa26.09■■□□□ 1.77
NR1H3-227ENST00000498548 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
NR1H3-227ENST00000498548 FANCAO15360 1455 aa26.09■■□□□ 1.77
NR1H3-227ENST00000498548 KIF14Q15058 1648 aa26.07■■□□□ 1.76
NR1H3-227ENST00000498548 FRMPD1Q5SYB0 1578 aa26.06■■□□□ 1.76
NR1H3-227ENST00000498548 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
NR1H3-227ENST00000498548 PLCH2O75038 1416 aa26.04■■□□□ 1.76
NR1H3-227ENST00000498548 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
NR1H3-227ENST00000498548 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
NR1H3-227ENST00000498548 MYO5CQ9NQX4 1742 aa26■■□□□ 1.75
NR1H3-227ENST00000498548 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
NR1H3-227ENST00000498548 RICTORQ6R327 1708 aa26■■□□□ 1.75
NR1H3-227ENST00000498548 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
NR1H3-227ENST00000498548 FYCO1Q9BQS8 1478 aa25.98■■□□□ 1.75
NR1H3-227ENST00000498548 EFCAB2Q5VUJ9 269 aa25.96■■□□□ 1.75
NR1H3-227ENST00000498548 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
NR1H3-227ENST00000498548 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
NR1H3-227ENST00000498548 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms