RNA–Protein interactions for RNA: ENST00000498450.1

TFAP2A-219, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-219ENST00000498450 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
TFAP2A-219ENST00000498450 NUP160Q12769 1436 aa17.2■□□□□ 0.34
TFAP2A-219ENST00000498450 HECW2Q9P2P5 1572 aa17.17■□□□□ 0.34
TFAP2A-219ENST00000498450 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
TFAP2A-219ENST00000498450 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
TFAP2A-219ENST00000498450 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
TFAP2A-219ENST00000498450 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
TFAP2A-219ENST00000498450 NPM1P06748 294 aaKnown RBP eCLIP17.11■□□□□ 0.33
TFAP2A-219ENST00000498450 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
TFAP2A-219ENST00000498450 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
TFAP2A-219ENST00000498450 CUX1P39880 1505 aa17.05■□□□□ 0.32
TFAP2A-219ENST00000498450 PRG4Q92954 1404 aaPredicted RBP17.02■□□□□ 0.31
TFAP2A-219ENST00000498450 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
TFAP2A-219ENST00000498450 ADAMTS12P58397 1594 aa17■□□□□ 0.31
TFAP2A-219ENST00000498450 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
TFAP2A-219ENST00000498450 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
TFAP2A-219ENST00000498450 ADCY10Q96PN6 1610 aa16.93■□□□□ 0.3
TFAP2A-219ENST00000498450 SOCS7O14512 581 aa16.93■□□□□ 0.3
TFAP2A-219ENST00000498450 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
TFAP2A-219ENST00000498450 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
TFAP2A-219ENST00000498450 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
TFAP2A-219ENST00000498450 GLI2P10070 1586 aa16.87■□□□□ 0.29
TFAP2A-219ENST00000498450 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
TFAP2A-219ENST00000498450 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
TFAP2A-219ENST00000498450 WRNQ14191 1432 aaPredicted RBP eCLIP16.81■□□□□ 0.28
TFAP2A-219ENST00000498450 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
TFAP2A-219ENST00000498450 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
TFAP2A-219ENST00000498450 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
TFAP2A-219ENST00000498450 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.28
TFAP2A-219ENST00000498450 KCNA4P22459 653 aa16.75■□□□□ 0.27
TFAP2A-219ENST00000498450 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
TFAP2A-219ENST00000498450 ASXL2Q76L83 1435 aa16.71■□□□□ 0.27
TFAP2A-219ENST00000498450 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
TFAP2A-219ENST00000498450 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
TFAP2A-219ENST00000498450 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
TFAP2A-219ENST00000498450 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
TFAP2A-219ENST00000498450 PTPRGP23470 1445 aa16.66■□□□□ 0.26
TFAP2A-219ENST00000498450 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
TFAP2A-219ENST00000498450 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
TFAP2A-219ENST00000498450 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.24
TFAP2A-219ENST00000498450 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
TFAP2A-219ENST00000498450 PTPRMP28827 1452 aa16.57■□□□□ 0.24
TFAP2A-219ENST00000498450 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
TFAP2A-219ENST00000498450 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
TFAP2A-219ENST00000498450 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
TFAP2A-219ENST00000498450 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
TFAP2A-219ENST00000498450 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
TFAP2A-219ENST00000498450 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
TFAP2A-219ENST00000498450 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
TFAP2A-219ENST00000498450 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
TFAP2A-219ENST00000498450 CUL7Q14999 1698 aa16.51■□□□□ 0.23
TFAP2A-219ENST00000498450 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
TFAP2A-219ENST00000498450 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
TFAP2A-219ENST00000498450 KIF21BO75037 1637 aa16.46■□□□□ 0.23
TFAP2A-219ENST00000498450 WDR7Q9Y4E6 1490 aa16.43■□□□□ 0.22
TFAP2A-219ENST00000498450 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
TFAP2A-219ENST00000498450 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
TFAP2A-219ENST00000498450 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
TFAP2A-219ENST00000498450 CD109Q6YHK3 1445 aa16.41■□□□□ 0.22
TFAP2A-219ENST00000498450 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
TFAP2A-219ENST00000498450 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
TFAP2A-219ENST00000498450 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
TFAP2A-219ENST00000498450 IGF1RP08069 1367 aa16.36■□□□□ 0.21
TFAP2A-219ENST00000498450 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.21
TFAP2A-219ENST00000498450 MADDQ8WXG6 1647 aa16.31■□□□□ 0.2
TFAP2A-219ENST00000498450 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
TFAP2A-219ENST00000498450 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
TFAP2A-219ENST00000498450 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
TFAP2A-219ENST00000498450 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
TFAP2A-219ENST00000498450 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
TFAP2A-219ENST00000498450 HSPA2P54652 639 aa16.27■□□□□ 0.2
TFAP2A-219ENST00000498450 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
TFAP2A-219ENST00000498450 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
TFAP2A-219ENST00000498450 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
TFAP2A-219ENST00000498450 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
TFAP2A-219ENST00000498450 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
TFAP2A-219ENST00000498450 NEO1Q92859 1461 aa16.19■□□□□ 0.18
TFAP2A-219ENST00000498450 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
TFAP2A-219ENST00000498450 RIMS1Q86UR5 1692 aaKnown RBP16.18■□□□□ 0.18
TFAP2A-219ENST00000498450 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
TFAP2A-219ENST00000498450 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
TFAP2A-219ENST00000498450 KCNH8Q96L42 1107 aa16.16■□□□□ 0.18
TFAP2A-219ENST00000498450 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
TFAP2A-219ENST00000498450 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
TFAP2A-219ENST00000498450 PTPRTO14522 1441 aa16.11■□□□□ 0.17
TFAP2A-219ENST00000498450 FANCAO15360 1455 aa16.11■□□□□ 0.17
TFAP2A-219ENST00000498450 ABCA8O94911 1581 aa16.11■□□□□ 0.17
TFAP2A-219ENST00000498450 ABCA9Q8IUA7 1624 aa16.11■□□□□ 0.17
TFAP2A-219ENST00000498450 TTC37Q6PGP7 1564 aa16.1■□□□□ 0.17
TFAP2A-219ENST00000498450 FRMPD1Q5SYB0 1578 aa16.09■□□□□ 0.17
TFAP2A-219ENST00000498450 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.16
TFAP2A-219ENST00000498450 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
TFAP2A-219ENST00000498450 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
TFAP2A-219ENST00000498450 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
TFAP2A-219ENST00000498450 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
TFAP2A-219ENST00000498450 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
TFAP2A-219ENST00000498450 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
TFAP2A-219ENST00000498450 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
TFAP2A-219ENST00000498450 ZMYM4Q5VZL5 1548 aa16■□□□□ 0.15
TFAP2A-219ENST00000498450 DENND4BO75064 1496 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms