RNA–Protein interactions for RNA: ENST00000498122.4

CHEK1-205, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-205ENST00000498122 CLASP1Q7Z460 1538 aa14.96□□□□□ -0.02
CHEK1-205ENST00000498122 CEP170Q5SW79 1584 aa14.95□□□□□ -0.02
CHEK1-205ENST00000498122 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
CHEK1-205ENST00000498122 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
CHEK1-205ENST00000498122 CUL7Q14999 1698 aa14.9□□□□□ -0.02
CHEK1-205ENST00000498122 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
CHEK1-205ENST00000498122 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
CHEK1-205ENST00000498122 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
CHEK1-205ENST00000498122 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
CHEK1-205ENST00000498122 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
CHEK1-205ENST00000498122 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
CHEK1-205ENST00000498122 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
CHEK1-205ENST00000498122 EEA1Q15075 1411 aa14.84□□□□□ -0.03
CHEK1-205ENST00000498122 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
CHEK1-205ENST00000498122 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
CHEK1-205ENST00000498122 JPH4Q96JJ6 628 aa14.82□□□□□ -0.04
CHEK1-205ENST00000498122 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
CHEK1-205ENST00000498122 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
CHEK1-205ENST00000498122 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
CHEK1-205ENST00000498122 CYB5RLQ6IPT4 315 aa14.76□□□□□ -0.05
CHEK1-205ENST00000498122 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
CHEK1-205ENST00000498122 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
CHEK1-205ENST00000498122 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
CHEK1-205ENST00000498122 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
CHEK1-205ENST00000498122 KIF21BO75037 1637 aa14.69□□□□□ -0.06
CHEK1-205ENST00000498122 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
CHEK1-205ENST00000498122 UGGT2Q9NYU1 1516 aa14.67□□□□□ -0.06
CHEK1-205ENST00000498122 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
CHEK1-205ENST00000498122 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
CHEK1-205ENST00000498122 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
CHEK1-205ENST00000498122 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
CHEK1-205ENST00000498122 TTBK1Q5TCY1 1321 aaPredicted RBP14.61□□□□□ -0.07
CHEK1-205ENST00000498122 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
CHEK1-205ENST00000498122 PTPRGP23470 1445 aa14.6□□□□□ -0.07
CHEK1-205ENST00000498122 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
CHEK1-205ENST00000498122 KIAA0556O60303 1618 aa14.59□□□□□ -0.07
CHEK1-205ENST00000498122 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
CHEK1-205ENST00000498122 P3H3Q8IVL6 736 aa14.58□□□□□ -0.08
CHEK1-205ENST00000498122 SAMD9Q5K651 1589 aa14.53□□□□□ -0.08
CHEK1-205ENST00000498122 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
CHEK1-205ENST00000498122 FHOD3Q2V2M9 1422 aa14.51□□□□□ -0.09
CHEK1-205ENST00000498122 PLB1Q6P1J6 1458 aa14.5□□□□□ -0.09
CHEK1-205ENST00000498122 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
CHEK1-205ENST00000498122 ARHGAP35Q9NRY4 1499 aa14.5□□□□□ -0.09
CHEK1-205ENST00000498122 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
CHEK1-205ENST00000498122 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
CHEK1-205ENST00000498122 ABCC2Q92887 1545 aa14.46□□□□□ -0.1
CHEK1-205ENST00000498122 ABCA8O94911 1581 aa14.45□□□□□ -0.1
CHEK1-205ENST00000498122 EFCAB5A4FU69 1503 aa14.45□□□□□ -0.1
CHEK1-205ENST00000498122 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
CHEK1-205ENST00000498122 KDM5BQ9UGL1 1544 aa14.41□□□□□ -0.1
CHEK1-205ENST00000498122 CLIP1P30622 1438 aa14.41□□□□□ -0.1
CHEK1-205ENST00000498122 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
CHEK1-205ENST00000498122 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHEK1-205ENST00000498122 NUP153P49790 1475 aaKnown RBP14.38□□□□□ -0.11
CHEK1-205ENST00000498122 MAPKBP1O60336 1514 aa14.37□□□□□ -0.11
CHEK1-205ENST00000498122 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
CHEK1-205ENST00000498122 ATP10BO94823 1461 aa14.37□□□□□ -0.11
CHEK1-205ENST00000498122 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
CHEK1-205ENST00000498122 RAPGEF6Q8TEU7 1601 aa14.34□□□□□ -0.11
CHEK1-205ENST00000498122 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.11
CHEK1-205ENST00000498122 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
CHEK1-205ENST00000498122 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
CHEK1-205ENST00000498122 FAM69CQ0P6D2 419 aa14.31□□□□□ -0.12
CHEK1-205ENST00000498122 DIP2BQ9P265 1576 aa14.29□□□□□ -0.12
CHEK1-205ENST00000498122 EPRSP07814 1512 aaKnown RBP14.28□□□□□ -0.12
CHEK1-205ENST00000498122 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
CHEK1-205ENST00000498122 WDR7Q9Y4E6 1490 aa14.28□□□□□ -0.12
CHEK1-205ENST00000498122 CASKIN1Q8WXD9 1431 aa14.27□□□□□ -0.12
CHEK1-205ENST00000498122 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
CHEK1-205ENST00000498122 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.13
CHEK1-205ENST00000498122 PCF11O94913 1555 aaKnown RBP14.26□□□□□ -0.13
CHEK1-205ENST00000498122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.25□□□□□ -0.13
CHEK1-205ENST00000498122 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
CHEK1-205ENST00000498122 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
CHEK1-205ENST00000498122 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
CHEK1-205ENST00000498122 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
CHEK1-205ENST00000498122 GLI2P10070 1586 aa14.22□□□□□ -0.13
CHEK1-205ENST00000498122 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
CHEK1-205ENST00000498122 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
CHEK1-205ENST00000498122 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
CHEK1-205ENST00000498122 LRRIQ1Q96JM4 1722 aa14.19□□□□□ -0.14
CHEK1-205ENST00000498122 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
CHEK1-205ENST00000498122 MAGI3Q5TCQ9 1506 aa14.17□□□□□ -0.14
CHEK1-205ENST00000498122 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
CHEK1-205ENST00000498122 CCDC18Q5T9S5 1454 aa14.14□□□□□ -0.15
CHEK1-205ENST00000498122 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
CHEK1-205ENST00000498122 TROQ12816 1431 aaPredicted RBP14.14□□□□□ -0.15
CHEK1-205ENST00000498122 PPRC1Q5VV67 1664 aaKnown RBP14.14□□□□□ -0.15
CHEK1-205ENST00000498122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHEK1-205ENST00000498122 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
CHEK1-205ENST00000498122 ABCA9Q8IUA7 1624 aa14.11□□□□□ -0.15
CHEK1-205ENST00000498122 COL17A1Q9UMD9 1497 aaPredicted RBP14.11□□□□□ -0.15
CHEK1-205ENST00000498122 KIF14Q15058 1648 aa14.1□□□□□ -0.15
CHEK1-205ENST00000498122 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
CHEK1-205ENST00000498122 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
CHEK1-205ENST00000498122 TSPOAP1O95153 1857 aa14.08□□□□□ -0.16
CHEK1-205ENST00000498122 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
CHEK1-205ENST00000498122 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
CHEK1-205ENST00000498122 PLCH2O75038 1416 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms