RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 KIF27Q86VH2 1401 aa32.51■■■□□ 2.79
PRKCB-209ENST00000498058 CUL7Q14999 1698 aa32.44■■■□□ 2.78
PRKCB-209ENST00000498058 KIAA0586Q9BVV6 1533 aa32.41■■■□□ 2.78
PRKCB-209ENST00000498058 KIF13AQ9H1H9 1805 aa32.38■■■□□ 2.77
PRKCB-209ENST00000498058 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.77
PRKCB-209ENST00000498058 ADCY10Q96PN6 1610 aa32.29■■■□□ 2.76
PRKCB-209ENST00000498058 MAPKBP1O60336 1514 aa32.19■■■□□ 2.74
PRKCB-209ENST00000498058 ABCC10Q5T3U5 1492 aa32.18■■■□□ 2.74
PRKCB-209ENST00000498058 NPM1P06748 294 aaKnown RBP eCLIP32.15■■■□□ 2.74
PRKCB-209ENST00000498058 FAM69CQ0P6D2 419 aa32.14■■■□□ 2.74
PRKCB-209ENST00000498058 DIP2BQ9P265 1576 aa32.12■■■□□ 2.73
PRKCB-209ENST00000498058 PTPRGP23470 1445 aa32.1■■■□□ 2.73
PRKCB-209ENST00000498058 IQGAP2Q13576 1575 aa32.1■■■□□ 2.73
PRKCB-209ENST00000498058 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
PRKCB-209ENST00000498058 TNIKQ9UKE5 1360 aa32.05■■■□□ 2.72
PRKCB-209ENST00000498058 CARMIL2Q6F5E8 1435 aa32.02■■■□□ 2.72
PRKCB-209ENST00000498058 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
PRKCB-209ENST00000498058 DISP1Q96F81 1524 aa32.01■■■□□ 2.72
PRKCB-209ENST00000498058 AEBP2Q6ZN18 517 aaPredicted RBP32■■■□□ 2.71
PRKCB-209ENST00000498058 ABCC2Q92887 1545 aa31.94■■■□□ 2.7
PRKCB-209ENST00000498058 TSPOAP1O95153 1857 aa31.93■■■□□ 2.7
PRKCB-209ENST00000498058 UGGT2Q9NYU1 1516 aa31.92■■■□□ 2.7
PRKCB-209ENST00000498058 UHRF1BP1LA0JNW5 1464 aa31.88■■■□□ 2.69
PRKCB-209ENST00000498058 UACAQ9BZF9 1416 aa31.86■■■□□ 2.69
PRKCB-209ENST00000498058 KIAA0556O60303 1618 aa31.84■■■□□ 2.69
PRKCB-209ENST00000498058 ASXL2Q76L83 1435 aa31.83■■■□□ 2.69
PRKCB-209ENST00000498058 KDM6BO15054 1643 aa31.8■■■□□ 2.68
PRKCB-209ENST00000498058 CTTNBP2Q8WZ74 1663 aa31.78■■■□□ 2.68
PRKCB-209ENST00000498058 PLB1Q6P1J6 1458 aa31.77■■■□□ 2.68
PRKCB-209ENST00000498058 PPRC1Q5VV67 1664 aaKnown RBP31.76■■■□□ 2.67
PRKCB-209ENST00000498058 KDM5BQ9UGL1 1544 aa31.75■■■□□ 2.67
PRKCB-209ENST00000498058 GLI2P10070 1586 aa31.74■■■□□ 2.67
PRKCB-209ENST00000498058 PRXQ9BXM0 1461 aa31.73■■■□□ 2.67
PRKCB-209ENST00000498058 ZCCHC11Q5TAX3 1644 aaKnown RBP31.71■■■□□ 2.67
PRKCB-209ENST00000498058 EPRSP07814 1512 aaKnown RBP31.66■■■□□ 2.66
PRKCB-209ENST00000498058 MAP3K4Q9Y6R4 1608 aa31.6■■■□□ 2.65
PRKCB-209ENST00000498058 GOLGA3Q08378 1498 aa31.58■■■□□ 2.65
PRKCB-209ENST00000498058 ABCA8O94911 1581 aa31.56■■■□□ 2.64
PRKCB-209ENST00000498058 KDM4FA0A1W2PPD8 638 aa31.56■■■□□ 2.64
PRKCB-209ENST00000498058 COL17A1Q9UMD9 1497 aaPredicted RBP31.55■■■□□ 2.64
PRKCB-209ENST00000498058 WDR7Q9Y4E6 1490 aa31.51■■■□□ 2.63
PRKCB-209ENST00000498058 CSRNP3Q8WYN3 585 aa31.46■■■□□ 2.63
PRKCB-209ENST00000498058 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
PRKCB-209ENST00000498058 TEX14Q8IWB6 1497 aa31.4■■■□□ 2.62
PRKCB-209ENST00000498058 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
PRKCB-209ENST00000498058 SAMD9Q5K651 1589 aa31.34■■■□□ 2.61
PRKCB-209ENST00000498058 ARID3CA6NKF2 412 aa31.33■■■□□ 2.61
PRKCB-209ENST00000498058 CFAP43Q8NDM7 1665 aa31.32■■■□□ 2.6
PRKCB-209ENST00000498058 CD109Q6YHK3 1445 aa31.32■■■□□ 2.6
PRKCB-209ENST00000498058 ATP10BO94823 1461 aa31.31■■■□□ 2.6
PRKCB-209ENST00000498058 MAGI3Q5TCQ9 1506 aa31.3■■■□□ 2.6
PRKCB-209ENST00000498058 ADGRL1O94910 1474 aa31.26■■■□□ 2.59
PRKCB-209ENST00000498058 EEA1Q15075 1411 aa31.25■■■□□ 2.59
PRKCB-209ENST00000498058 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
PRKCB-209ENST00000498058 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.59
PRKCB-209ENST00000498058 RANGAP1P46060 587 aaPredicted RBP31.18■■■□□ 2.58
PRKCB-209ENST00000498058 FHOD3Q2V2M9 1422 aa31.15■■■□□ 2.58
PRKCB-209ENST00000498058 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
PRKCB-209ENST00000498058 ABCA9Q8IUA7 1624 aa31.12■■■□□ 2.57
PRKCB-209ENST00000498058 KIF21BO75037 1637 aa31.09■■■□□ 2.57
PRKCB-209ENST00000498058 ARAP3Q8WWN8 1544 aa31.06■■■□□ 2.56
PRKCB-209ENST00000498058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
PRKCB-209ENST00000498058 HNRNPUL2Q1KMD3 747 aaKnown RBP31.02■■■□□ 2.56
PRKCB-209ENST00000498058 EFCAB5A4FU69 1503 aa30.96■■■□□ 2.55
PRKCB-209ENST00000498058 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
PRKCB-209ENST00000498058 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
PRKCB-209ENST00000498058 NEO1Q92859 1461 aa30.91■■■□□ 2.54
PRKCB-209ENST00000498058 RAPGEF3O95398 923 aa30.91■■■□□ 2.54
PRKCB-209ENST00000498058 PHLDB1Q86UU1 1377 aa30.91■■■□□ 2.54
PRKCB-209ENST00000498058 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
PRKCB-209ENST00000498058 PLEKHD1A6NEE1 506 aa30.86■■■□□ 2.53
PRKCB-209ENST00000498058 HECW2Q9P2P5 1572 aa30.83■■■□□ 2.53
PRKCB-209ENST00000498058 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
PRKCB-209ENST00000498058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.83■■■□□ 2.537e-7■□□□□ 9.5
PRKCB-209ENST00000498058 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
PRKCB-209ENST00000498058 TTC37Q6PGP7 1564 aa30.79■■■□□ 2.52
PRKCB-209ENST00000498058 ARHGAP35Q9NRY4 1499 aa30.78■■■□□ 2.52
PRKCB-209ENST00000498058 ADAMTSL3P82987 1691 aa30.74■■■□□ 2.51
PRKCB-209ENST00000498058 AKNAQ7Z591 1439 aa30.73■■■□□ 2.51
PRKCB-209ENST00000498058 RICTORQ6R327 1708 aa30.73■■■□□ 2.51
PRKCB-209ENST00000498058 FANCAO15360 1455 aa30.72■■■□□ 2.51
PRKCB-209ENST00000498058 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.5
PRKCB-209ENST00000498058 FMN1Q68DA7 1419 aa30.67■■■□□ 2.5
PRKCB-209ENST00000498058 BCORL1Q5H9F3 1711 aa30.66■■■□□ 2.5
PRKCB-209ENST00000498058 CFAP74Q9C0B2 1584 aa30.66■■■□□ 2.5
PRKCB-209ENST00000498058 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
PRKCB-209ENST00000498058 ATP1B4Q9UN42 357 aaPredicted RBP30.65■■■□□ 2.5
PRKCB-209ENST00000498058 ARHGEF40Q8TER5 1519 aa30.64■■■□□ 2.5
PRKCB-209ENST00000498058 PTPRMP28827 1452 aa30.63■■■□□ 2.49
PRKCB-209ENST00000498058 LRRIQ1Q96JM4 1722 aa30.61■■■□□ 2.49
PRKCB-209ENST00000498058 PLCH2O75038 1416 aa30.6■■■□□ 2.49
PRKCB-209ENST00000498058 MADDQ8WXG6 1647 aa30.59■■■□□ 2.49
PRKCB-209ENST00000498058 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
PRKCB-209ENST00000498058 ZMYM4Q5VZL5 1548 aa30.58■■■□□ 2.49
PRKCB-209ENST00000498058 ARID4BQ4LE39 1312 aaPredicted RBP30.58■■■□□ 2.49
PRKCB-209ENST00000498058 KIF14Q15058 1648 aa30.58■■■□□ 2.49
PRKCB-209ENST00000498058 YEATS2Q9ULM3 1422 aa30.56■■■□□ 2.48
PRKCB-209ENST00000498058 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
PRKCB-209ENST00000498058 SCAPERQ9BY12 1400 aa30.53■■■□□ 2.48
PRKCB-209ENST00000498058 MYO5CQ9NQX4 1742 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms