RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
NUDCD3-211ENST00000497978 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
NUDCD3-211ENST00000497978 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
NUDCD3-211ENST00000497978 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
NUDCD3-211ENST00000497978 IGF1RP08069 1367 aa20.4■□□□□ 0.86
NUDCD3-211ENST00000497978 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
NUDCD3-211ENST00000497978 CUL7Q14999 1698 aa20.38■□□□□ 0.85
NUDCD3-211ENST00000497978 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
NUDCD3-211ENST00000497978 FOXD1Q16676 465 aa20.31■□□□□ 0.84
NUDCD3-211ENST00000497978 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
NUDCD3-211ENST00000497978 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
NUDCD3-211ENST00000497978 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
NUDCD3-211ENST00000497978 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
NUDCD3-211ENST00000497978 KIF13AQ9H1H9 1805 aa20.14■□□□□ 0.81
NUDCD3-211ENST00000497978 IQGAP2Q13576 1575 aa20.13■□□□□ 0.81
NUDCD3-211ENST00000497978 PTPRGP23470 1445 aa20.13■□□□□ 0.81
NUDCD3-211ENST00000497978 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
NUDCD3-211ENST00000497978 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
NUDCD3-211ENST00000497978 FAM69CQ0P6D2 419 aa20.11■□□□□ 0.81
NUDCD3-211ENST00000497978 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
NUDCD3-211ENST00000497978 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
NUDCD3-211ENST00000497978 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
NUDCD3-211ENST00000497978 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
NUDCD3-211ENST00000497978 ABCC2Q92887 1545 aa20■□□□□ 0.79
NUDCD3-211ENST00000497978 DISP1Q96F81 1524 aa20■□□□□ 0.79
NUDCD3-211ENST00000497978 UGGT2Q9NYU1 1516 aa20■□□□□ 0.79
NUDCD3-211ENST00000497978 UACAQ9BZF9 1416 aa19.97■□□□□ 0.79
NUDCD3-211ENST00000497978 UHRF1BP1LA0JNW5 1464 aa19.97■□□□□ 0.79
NUDCD3-211ENST00000497978 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
NUDCD3-211ENST00000497978 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
NUDCD3-211ENST00000497978 PLB1Q6P1J6 1458 aa19.92■□□□□ 0.78
NUDCD3-211ENST00000497978 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
NUDCD3-211ENST00000497978 TSPOAP1O95153 1857 aa19.91■□□□□ 0.78
NUDCD3-211ENST00000497978 PRXQ9BXM0 1461 aa19.9■□□□□ 0.78
NUDCD3-211ENST00000497978 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
NUDCD3-211ENST00000497978 KDM6BO15054 1643 aa19.87■□□□□ 0.77
NUDCD3-211ENST00000497978 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
NUDCD3-211ENST00000497978 GLI2P10070 1586 aa19.85■□□□□ 0.77
NUDCD3-211ENST00000497978 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
NUDCD3-211ENST00000497978 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
NUDCD3-211ENST00000497978 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
NUDCD3-211ENST00000497978 ADRA2BP18089 450 aa19.79■□□□□ 0.76
NUDCD3-211ENST00000497978 EPRSP07814 1512 aaKnown RBP19.79■□□□□ 0.76
NUDCD3-211ENST00000497978 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
NUDCD3-211ENST00000497978 EEA1Q15075 1411 aa19.75■□□□□ 0.75
NUDCD3-211ENST00000497978 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
NUDCD3-211ENST00000497978 ABCA8O94911 1581 aa19.74■□□□□ 0.75
NUDCD3-211ENST00000497978 WDR7Q9Y4E6 1490 aa19.74■□□□□ 0.75
NUDCD3-211ENST00000497978 MAP3K4Q9Y6R4 1608 aa19.73■□□□□ 0.75
NUDCD3-211ENST00000497978 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
NUDCD3-211ENST00000497978 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
NUDCD3-211ENST00000497978 KCNH8Q96L42 1107 aa19.67■□□□□ 0.74
NUDCD3-211ENST00000497978 SAMD9Q5K651 1589 aa19.63■□□□□ 0.73
NUDCD3-211ENST00000497978 CD109Q6YHK3 1445 aa19.62■□□□□ 0.73
NUDCD3-211ENST00000497978 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
NUDCD3-211ENST00000497978 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
NUDCD3-211ENST00000497978 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
NUDCD3-211ENST00000497978 COL17A1Q9UMD9 1497 aaPredicted RBP19.6■□□□□ 0.73
NUDCD3-211ENST00000497978 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
NUDCD3-211ENST00000497978 MAGI3Q5TCQ9 1506 aa19.59■□□□□ 0.73
NUDCD3-211ENST00000497978 ATP10BO94823 1461 aa19.59■□□□□ 0.73
NUDCD3-211ENST00000497978 RAPGEF6Q8TEU7 1601 aa19.57■□□□□ 0.72
NUDCD3-211ENST00000497978 KIF21BO75037 1637 aa19.55■□□□□ 0.72
NUDCD3-211ENST00000497978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
NUDCD3-211ENST00000497978 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
NUDCD3-211ENST00000497978 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
NUDCD3-211ENST00000497978 EFCAB5A4FU69 1503 aa19.49■□□□□ 0.71
NUDCD3-211ENST00000497978 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
NUDCD3-211ENST00000497978 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
NUDCD3-211ENST00000497978 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
NUDCD3-211ENST00000497978 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
NUDCD3-211ENST00000497978 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
NUDCD3-211ENST00000497978 ARAP3Q8WWN8 1544 aa19.44■□□□□ 0.7
NUDCD3-211ENST00000497978 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
NUDCD3-211ENST00000497978 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
NUDCD3-211ENST00000497978 NEO1Q92859 1461 aa19.38■□□□□ 0.69
NUDCD3-211ENST00000497978 FMN1Q68DA7 1419 aa19.34■□□□□ 0.69
NUDCD3-211ENST00000497978 RAPGEF3O95398 923 aa19.33■□□□□ 0.68
NUDCD3-211ENST00000497978 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
NUDCD3-211ENST00000497978 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
NUDCD3-211ENST00000497978 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
NUDCD3-211ENST00000497978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.29■□□□□ 0.68
NUDCD3-211ENST00000497978 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
NUDCD3-211ENST00000497978 CFAP74Q9C0B2 1584 aa19.28■□□□□ 0.68
NUDCD3-211ENST00000497978 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
NUDCD3-211ENST00000497978 FANCAO15360 1455 aa19.27■□□□□ 0.67
NUDCD3-211ENST00000497978 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
NUDCD3-211ENST00000497978 DENND4BO75064 1496 aaPredicted RBP19.25■□□□□ 0.67
NUDCD3-211ENST00000497978 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
NUDCD3-211ENST00000497978 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
NUDCD3-211ENST00000497978 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
NUDCD3-211ENST00000497978 ARID4BQ4LE39 1312 aaPredicted RBP19.21■□□□□ 0.67
NUDCD3-211ENST00000497978 RICTORQ6R327 1708 aa19.2■□□□□ 0.66
NUDCD3-211ENST00000497978 PLCH2O75038 1416 aa19.19■□□□□ 0.66
NUDCD3-211ENST00000497978 HECW2Q9P2P5 1572 aa19.19■□□□□ 0.66
NUDCD3-211ENST00000497978 CLIP1P30622 1438 aa19.17■□□□□ 0.66
NUDCD3-211ENST00000497978 ARHGEF40Q8TER5 1519 aa19.16■□□□□ 0.66
NUDCD3-211ENST00000497978 ADAMTSL3P82987 1691 aa19.16■□□□□ 0.66
NUDCD3-211ENST00000497978 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
NUDCD3-211ENST00000497978 TROQ12816 1431 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms