RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CEP170Q5SW79 1584 aa39.07■■■■□ 3.84
TNFRSF4-203ENST00000497869 NUP160Q12769 1436 aa39.06■■■■□ 3.84
TNFRSF4-203ENST00000497869 RANGAP1P46060 587 aaPredicted RBP39.04■■■■□ 3.84
TNFRSF4-203ENST00000497869 CTTNBP2Q8WZ74 1663 aa38.99■■■■□ 3.83
TNFRSF4-203ENST00000497869 KIAA0586Q9BVV6 1533 aa38.94■■■■□ 3.82
TNFRSF4-203ENST00000497869 CLIP1P30622 1438 aa38.93■■■■□ 3.82
TNFRSF4-203ENST00000497869 IQGAP2Q13576 1575 aa38.87■■■■□ 3.81
TNFRSF4-203ENST00000497869 ARHGAP35Q9NRY4 1499 aa38.83■■■■□ 3.81
TNFRSF4-203ENST00000497869 UGGT2Q9NYU1 1516 aa38.73■■■■□ 3.79
TNFRSF4-203ENST00000497869 ARAP1Q96P48 1450 aa38.72■■■■□ 3.79
TNFRSF4-203ENST00000497869 CLASP1Q7Z460 1538 aa38.72■■■■□ 3.79
TNFRSF4-203ENST00000497869 JPH4Q96JJ6 628 aa38.71■■■■□ 3.79
TNFRSF4-203ENST00000497869 P3H3Q8IVL6 736 aa38.7■■■■□ 3.79
TNFRSF4-203ENST00000497869 SAMD9Q5K651 1589 aa38.67■■■■□ 3.78
TNFRSF4-203ENST00000497869 OSCARQ8IYS5 282 aa38.64■■■■□ 3.78
TNFRSF4-203ENST00000497869 DISP1Q96F81 1524 aa38.64■■■■□ 3.78
TNFRSF4-203ENST00000497869 EFCAB5A4FU69 1503 aa38.64■■■■□ 3.78
TNFRSF4-203ENST00000497869 FHOD3Q2V2M9 1422 aa38.61■■■■□ 3.77
TNFRSF4-203ENST00000497869 SHROOM2Q13796 1616 aa38.55■■■■□ 3.76
TNFRSF4-203ENST00000497869 KIAA0556O60303 1618 aa38.52■■■■□ 3.76
TNFRSF4-203ENST00000497869 PRG4Q92954 1404 aaPredicted RBP38.52■■■■□ 3.76
TNFRSF4-203ENST00000497869 VPS8Q8N3P4 1428 aa38.48■■■■□ 3.75
TNFRSF4-203ENST00000497869 ERCC6L2Q5T890 1561 aa38.46■■■■□ 3.75
TNFRSF4-203ENST00000497869 CARMIL2Q6F5E8 1435 aa38.4■■■■□ 3.74
TNFRSF4-203ENST00000497869 TTBK1Q5TCY1 1321 aaPredicted RBP38.32■■■■□ 3.73
TNFRSF4-203ENST00000497869 FMN1Q68DA7 1419 aa38.29■■■■□ 3.72
TNFRSF4-203ENST00000497869 PCF11O94913 1555 aaKnown RBP38.23■■■■□ 3.71
TNFRSF4-203ENST00000497869 CASKIN1Q8WXD9 1431 aa38.2■■■■□ 3.71
TNFRSF4-203ENST00000497869 PTPRGP23470 1445 aa38.18■■■■□ 3.7
TNFRSF4-203ENST00000497869 PLB1Q6P1J6 1458 aa38.15■■■■□ 3.7
TNFRSF4-203ENST00000497869 FYCO1Q9BQS8 1478 aa38.12■■■■□ 3.69
TNFRSF4-203ENST00000497869 ATP1B4Q9UN42 357 aaPredicted RBP38.09■■■■□ 3.69
TNFRSF4-203ENST00000497869 PPARGC1BQ86YN6 1023 aaKnown RBP38.07■■■■□ 3.69
TNFRSF4-203ENST00000497869 ABCA8O94911 1581 aa38.04■■■■□ 3.68
TNFRSF4-203ENST00000497869 ARHGEF11O15085 1522 aa38.04■■■■□ 3.68
TNFRSF4-203ENST00000497869 RAPGEF6Q8TEU7 1601 aa38.02■■■■□ 3.68
TNFRSF4-203ENST00000497869 NUP153P49790 1475 aaKnown RBP38.02■■■■□ 3.68
TNFRSF4-203ENST00000497869 LRRIQ1Q96JM4 1722 aa37.98■■■■□ 3.67
TNFRSF4-203ENST00000497869 ARID3CA6NKF2 412 aa37.98■■■■□ 3.67
TNFRSF4-203ENST00000497869 KANK4Q5T7N3 995 aaPredicted RBP37.95■■■■□ 3.67
TNFRSF4-203ENST00000497869 UACAQ9BZF9 1416 aa37.95■■■■□ 3.67
TNFRSF4-203ENST00000497869 HECW1Q76N89 1606 aa37.95■■■■□ 3.66
TNFRSF4-203ENST00000497869 EPRSP07814 1512 aaKnown RBP37.92■■■■□ 3.66
TNFRSF4-203ENST00000497869 TIAM1Q13009 1591 aa37.91■■■■□ 3.66
TNFRSF4-203ENST00000497869 APLP2Q06481 763 aa37.91■■■■□ 3.66
TNFRSF4-203ENST00000497869 MAP3K1Q13233 1512 aa37.89■■■■□ 3.66
TNFRSF4-203ENST00000497869 CDK13Q14004 1512 aaKnown RBP37.89■■■■□ 3.66
TNFRSF4-203ENST00000497869 RIMBP3CA6NJZ7 1639 aa37.88■■■■□ 3.65
TNFRSF4-203ENST00000497869 RIMBP3BA6NNM3 1639 aa37.88■■■■□ 3.65
TNFRSF4-203ENST00000497869 RIMBP3Q9UFD9 1639 aa37.88■■■■□ 3.65
TNFRSF4-203ENST00000497869 ABCC2Q92887 1545 aa37.84■■■■□ 3.65
TNFRSF4-203ENST00000497869 CFAP43Q8NDM7 1665 aa37.83■■■■□ 3.65
TNFRSF4-203ENST00000497869 CCDC18Q5T9S5 1454 aa37.81■■■■□ 3.64
TNFRSF4-203ENST00000497869 UHRF1BP1LA0JNW5 1464 aa37.8■■■■□ 3.64
TNFRSF4-203ENST00000497869 ATP10BO94823 1461 aa37.8■■■■□ 3.64
TNFRSF4-203ENST00000497869 LRRC9Q6ZRR7 1453 aa37.77■■■■□ 3.64
TNFRSF4-203ENST00000497869 MAGI3Q5TCQ9 1506 aa37.77■■■■□ 3.64
TNFRSF4-203ENST00000497869 ADCY10Q96PN6 1610 aa37.75■■■■□ 3.63
TNFRSF4-203ENST00000497869 CYB5RLQ6IPT4 315 aa37.7■■■■□ 3.63
TNFRSF4-203ENST00000497869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.68■■■■□ 3.62
TNFRSF4-203ENST00000497869 HNRNPUL2Q1KMD3 747 aaKnown RBP37.68■■■■□ 3.62
TNFRSF4-203ENST00000497869 KDM5BQ9UGL1 1544 aa37.66■■■■□ 3.62
TNFRSF4-203ENST00000497869 MTUS2Q5JR59 1369 aa37.62■■■■□ 3.61
TNFRSF4-203ENST00000497869 ZCCHC11Q5TAX3 1644 aaKnown RBP37.57■■■■□ 3.61
TNFRSF4-203ENST00000497869 EHBP1L1Q8N3D4 1523 aa37.55■■■■□ 3.6
TNFRSF4-203ENST00000497869 CDK11AQ9UQ88 783 aaPredicted RBP37.52■■■■□ 3.6
TNFRSF4-203ENST00000497869 TROQ12816 1431 aaPredicted RBP37.52■■■■□ 3.6
TNFRSF4-203ENST00000497869 PLEKHD1A6NEE1 506 aa37.5■■■■□ 3.59
TNFRSF4-203ENST00000497869 DNAJC5Q9H3Z4 198 aa37.47■■■■□ 3.59
TNFRSF4-203ENST00000497869 PHLDB1Q86UU1 1377 aa37.47■■■■□ 3.59
TNFRSF4-203ENST00000497869 NCOA2Q15596 1464 aa37.45■■■■□ 3.59
TNFRSF4-203ENST00000497869 KIF14Q15058 1648 aa37.39■■■■□ 3.58
TNFRSF4-203ENST00000497869 SUPT6HQ7KZ85 1726 aaKnown RBP37.37■■■■□ 3.57
TNFRSF4-203ENST00000497869 ASXL2Q76L83 1435 aa37.35■■■■□ 3.57
TNFRSF4-203ENST00000497869 NPM1P06748 294 aaKnown RBP eCLIP37.35■■■■□ 3.57
TNFRSF4-203ENST00000497869 TRIM26Q12899 539 aaPredicted RBP37.33■■■■□ 3.57
TNFRSF4-203ENST00000497869 WDR7Q9Y4E6 1490 aa37.31■■■■□ 3.56
TNFRSF4-203ENST00000497869 ABCC10Q5T3U5 1492 aa37.29■■■■□ 3.56
TNFRSF4-203ENST00000497869 KCNH8Q96L42 1107 aa37.29■■■■□ 3.56
TNFRSF4-203ENST00000497869 RRBP1Q9P2E9 1410 aaKnown RBP37.23■■■■□ 3.55
TNFRSF4-203ENST00000497869 MYOM3Q5VTT5 1437 aa37.23■■■■□ 3.55
TNFRSF4-203ENST00000497869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.2■■■■□ 3.55
TNFRSF4-203ENST00000497869 MAPKBP1O60336 1514 aa37.19■■■■□ 3.54
TNFRSF4-203ENST00000497869 GPATCH8Q9UKJ3 1502 aaKnown RBP37.18■■■■□ 3.54
TNFRSF4-203ENST00000497869 CCNB3Q8WWL7 1395 aa37.18■■■■□ 3.54
TNFRSF4-203ENST00000497869 PCGF6Q9BYE7 350 aa37.18■■■■□ 3.54
TNFRSF4-203ENST00000497869 FGD6Q6ZV73 1430 aa37.17■■■■□ 3.54
TNFRSF4-203ENST00000497869 TTC37Q6PGP7 1564 aa37.16■■■■□ 3.54
TNFRSF4-203ENST00000497869 MIA2Q96PC5 1412 aa37.05■■■■□ 3.52
TNFRSF4-203ENST00000497869 CDC42BPAQ5VT25 1732 aa37.05■■■■□ 3.52
TNFRSF4-203ENST00000497869 ZNF644Q9H582 1327 aaPredicted RBP37.03■■■■□ 3.52
TNFRSF4-203ENST00000497869 CFDP1Q9UEE9 299 aaPredicted RBP37.02■■■■□ 3.52
TNFRSF4-203ENST00000497869 FAM50AQ14320 339 aaKnown RBP37.01■■■■□ 3.51
TNFRSF4-203ENST00000497869 ABCA9Q8IUA7 1624 aa37.01■■■■□ 3.51
TNFRSF4-203ENST00000497869 TCOF1Q13428 1488 aaKnown RBP36.99■■■■□ 3.51
TNFRSF4-203ENST00000497869 PTPN23Q9H3S7 1636 aa36.99■■■■□ 3.51
TNFRSF4-203ENST00000497869 PLCH2O75038 1416 aa36.97■■■■□ 3.51
TNFRSF4-203ENST00000497869 PREX2Q70Z35 1606 aa36.96■■■■□ 3.51
TNFRSF4-203ENST00000497869 ITSN2Q9NZM3 1697 aa36.96■■■■□ 3.51
TNFRSF4-203ENST00000497869 CDC42BPBQ9Y5S2 1711 aa36.95■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms