RNA–Protein interactions for RNA: ENST00000497675.2

FAAP20-214, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 4,478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-214ENST00000497675 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
FAAP20-214ENST00000497675 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
FAAP20-214ENST00000497675 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
FAAP20-214ENST00000497675 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
FAAP20-214ENST00000497675 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
FAAP20-214ENST00000497675 CCNB3Q8WWL7 1395 aa20.33■□□□□ 0.84
FAAP20-214ENST00000497675 KDM2AQ9Y2K7 1162 aa20.33■□□□□ 0.84
FAAP20-214ENST00000497675 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
FAAP20-214ENST00000497675 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
FAAP20-214ENST00000497675 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
FAAP20-214ENST00000497675 ANP32CO43423 234 aa20.29■□□□□ 0.84
FAAP20-214ENST00000497675 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
FAAP20-214ENST00000497675 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
FAAP20-214ENST00000497675 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
FAAP20-214ENST00000497675 CEP162Q5TB80 1403 aa20.28■□□□□ 0.84
FAAP20-214ENST00000497675 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
FAAP20-214ENST00000497675 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
FAAP20-214ENST00000497675 HDGFP51858 240 aaKnown RBP20.24■□□□□ 0.83
FAAP20-214ENST00000497675 WIZO95785 1651 aa20.23■□□□□ 0.83
FAAP20-214ENST00000497675 RGL3Q3MIN7 710 aa20.2■□□□□ 0.82
FAAP20-214ENST00000497675 GGT6Q6P531 493 aa20.2■□□□□ 0.82
FAAP20-214ENST00000497675 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
FAAP20-214ENST00000497675 A0A0G2JS52 829 aa20.18■□□□□ 0.82
FAAP20-214ENST00000497675 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
FAAP20-214ENST00000497675 KANK1Q14678 1352 aa20.18■□□□□ 0.82
FAAP20-214ENST00000497675 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.82
FAAP20-214ENST00000497675 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
FAAP20-214ENST00000497675 CLSPNQ9HAW4 1339 aa20.12■□□□□ 0.81
FAAP20-214ENST00000497675 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
FAAP20-214ENST00000497675 PTPRGP23470 1445 aa20.11■□□□□ 0.81
FAAP20-214ENST00000497675 ZBTB7CA1YPR0 619 aa20.1■□□□□ 0.81
FAAP20-214ENST00000497675 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
FAAP20-214ENST00000497675 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.8
FAAP20-214ENST00000497675 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.8
FAAP20-214ENST00000497675 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
FAAP20-214ENST00000497675 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
FAAP20-214ENST00000497675 POGKQ9P215 609 aa20.05■□□□□ 0.8
FAAP20-214ENST00000497675 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
FAAP20-214ENST00000497675 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
FAAP20-214ENST00000497675 TMC1Q8TDI8 760 aa20.02■□□□□ 0.8
FAAP20-214ENST00000497675 FAM69CQ0P6D2 419 aa20.01■□□□□ 0.79
FAAP20-214ENST00000497675 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
FAAP20-214ENST00000497675 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
FAAP20-214ENST00000497675 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
FAAP20-214ENST00000497675 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
FAAP20-214ENST00000497675 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
FAAP20-214ENST00000497675 KIF3BO15066 747 aa19.94■□□□□ 0.78
FAAP20-214ENST00000497675 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
FAAP20-214ENST00000497675 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■□□□ 13.2
FAAP20-214ENST00000497675 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
FAAP20-214ENST00000497675 MYT1Q01538 1121 aa19.9■□□□□ 0.78
FAAP20-214ENST00000497675 BCL11AQ9H165 835 aa19.89■□□□□ 0.78
FAAP20-214ENST00000497675 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.77
FAAP20-214ENST00000497675 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
FAAP20-214ENST00000497675 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
FAAP20-214ENST00000497675 NESP48681 1621 aa19.88■□□□□ 0.77
FAAP20-214ENST00000497675 WASHC2CQ9Y4E1 1318 aa19.86■□□□□ 0.77
FAAP20-214ENST00000497675 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
FAAP20-214ENST00000497675 HNRNPMP52272 730 aaKnown RBP eCLIP19.84■□□□□ 0.77
FAAP20-214ENST00000497675 GRIN2BQ13224 1484 aa19.83■□□□□ 0.77
FAAP20-214ENST00000497675 WDR43Q15061 677 aaKnown RBP eCLIP19.83■□□□□ 0.77
FAAP20-214ENST00000497675 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
FAAP20-214ENST00000497675 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
FAAP20-214ENST00000497675 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
FAAP20-214ENST00000497675 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
FAAP20-214ENST00000497675 CFTRP13569 1480 aa19.81■□□□□ 0.76
FAAP20-214ENST00000497675 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
FAAP20-214ENST00000497675 VPS8Q8N3P4 1428 aa19.79■□□□□ 0.76
FAAP20-214ENST00000497675 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
FAAP20-214ENST00000497675 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.76
FAAP20-214ENST00000497675 IGF1RP08069 1367 aa19.76■□□□□ 0.75
FAAP20-214ENST00000497675 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
FAAP20-214ENST00000497675 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
FAAP20-214ENST00000497675 DCAF11Q8TEB1 546 aa19.74■□□□□ 0.75
FAAP20-214ENST00000497675 PKD2Q13563 968 aa19.73■□□□□ 0.75
FAAP20-214ENST00000497675 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
FAAP20-214ENST00000497675 NUP155O75694 1391 aa19.72■□□□□ 0.75
FAAP20-214ENST00000497675 STK26Q9P289 416 aa19.7■□□□□ 0.74
FAAP20-214ENST00000497675 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
FAAP20-214ENST00000497675 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
FAAP20-214ENST00000497675 KANK4Q5T7N3 995 aaPredicted RBP19.68■□□□□ 0.74
FAAP20-214ENST00000497675 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
FAAP20-214ENST00000497675 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
FAAP20-214ENST00000497675 ARXQ96QS3 562 aa19.65■□□□□ 0.74
FAAP20-214ENST00000497675 PRG4Q92954 1404 aaPredicted RBP19.65■□□□□ 0.74
FAAP20-214ENST00000497675 HIRIP3Q9BW71 556 aaPredicted RBP19.62■□□□□ 0.73
FAAP20-214ENST00000497675 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
FAAP20-214ENST00000497675 NUDCQ9Y266 331 aa19.61■□□□□ 0.73
FAAP20-214ENST00000497675 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
FAAP20-214ENST00000497675 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
FAAP20-214ENST00000497675 SOX12O15370 315 aa19.58■□□□□ 0.73
FAAP20-214ENST00000497675 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.73
FAAP20-214ENST00000497675 TMF1P82094 1093 aa19.58■□□□□ 0.72
FAAP20-214ENST00000497675 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
FAAP20-214ENST00000497675 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
FAAP20-214ENST00000497675 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
FAAP20-214ENST00000497675 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
FAAP20-214ENST00000497675 NPHP1O15259 732 aa19.54■□□□□ 0.72
FAAP20-214ENST00000497675 HDGFL2Q7Z4V5 671 aaPredicted RBP19.53■□□□□ 0.72
FAAP20-214ENST00000497675 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms