RNA–Protein interactions for RNA: ENST00000497518.1

TMC4-204, Transcript of transmembrane channel like 4, humanhuman

TSL 2

Gene TMC4, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-204ENST00000497518 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
TMC4-204ENST00000497518 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
TMC4-204ENST00000497518 KIAA0586Q9BVV6 1533 aa24.67■■□□□ 1.54
TMC4-204ENST00000497518 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
TMC4-204ENST00000497518 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
TMC4-204ENST00000497518 IQGAP2Q13576 1575 aa24.48■■□□□ 1.51
TMC4-204ENST00000497518 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
TMC4-204ENST00000497518 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
TMC4-204ENST00000497518 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
TMC4-204ENST00000497518 PTPRGP23470 1445 aa24.42■■□□□ 1.5
TMC4-204ENST00000497518 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
TMC4-204ENST00000497518 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
TMC4-204ENST00000497518 TTBK1Q5TCY1 1321 aaPredicted RBP24.38■■□□□ 1.49
TMC4-204ENST00000497518 KIF13AQ9H1H9 1805 aa24.37■■□□□ 1.49
TMC4-204ENST00000497518 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
TMC4-204ENST00000497518 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
TMC4-204ENST00000497518 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
TMC4-204ENST00000497518 DISP1Q96F81 1524 aa24.3■■□□□ 1.48
TMC4-204ENST00000497518 DIP2BQ9P265 1576 aa24.29■■□□□ 1.48
TMC4-204ENST00000497518 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
TMC4-204ENST00000497518 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
TMC4-204ENST00000497518 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
TMC4-204ENST00000497518 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
TMC4-204ENST00000497518 KIAA0556O60303 1618 aa24.24■■□□□ 1.47
TMC4-204ENST00000497518 UHRF1BP1LA0JNW5 1464 aa24.23■■□□□ 1.47
TMC4-204ENST00000497518 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
TMC4-204ENST00000497518 PLB1Q6P1J6 1458 aa24.16■■□□□ 1.46
TMC4-204ENST00000497518 ASXL2Q76L83 1435 aa24.15■■□□□ 1.46
TMC4-204ENST00000497518 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
TMC4-204ENST00000497518 KDM5BQ9UGL1 1544 aa24.11■■□□□ 1.45
TMC4-204ENST00000497518 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
TMC4-204ENST00000497518 EEA1Q15075 1411 aa24.1■■□□□ 1.45
TMC4-204ENST00000497518 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
TMC4-204ENST00000497518 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
TMC4-204ENST00000497518 GLI2P10070 1586 aa24.06■■□□□ 1.44
TMC4-204ENST00000497518 KDM6BO15054 1643 aa24.06■■□□□ 1.44
TMC4-204ENST00000497518 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
TMC4-204ENST00000497518 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
TMC4-204ENST00000497518 ABCA8O94911 1581 aa23.99■■□□□ 1.43
TMC4-204ENST00000497518 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
TMC4-204ENST00000497518 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
TMC4-204ENST00000497518 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
TMC4-204ENST00000497518 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
TMC4-204ENST00000497518 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
TMC4-204ENST00000497518 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
TMC4-204ENST00000497518 KIF21BO75037 1637 aa23.85■■□□□ 1.41
TMC4-204ENST00000497518 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
TMC4-204ENST00000497518 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
TMC4-204ENST00000497518 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
TMC4-204ENST00000497518 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
TMC4-204ENST00000497518 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
TMC4-204ENST00000497518 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
TMC4-204ENST00000497518 RAPGEF6Q8TEU7 1601 aa23.79■■□□□ 1.4
TMC4-204ENST00000497518 ATP10BO94823 1461 aa23.79■■□□□ 1.4
TMC4-204ENST00000497518 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
TMC4-204ENST00000497518 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
TMC4-204ENST00000497518 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
TMC4-204ENST00000497518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
TMC4-204ENST00000497518 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
TMC4-204ENST00000497518 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
TMC4-204ENST00000497518 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
TMC4-204ENST00000497518 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
TMC4-204ENST00000497518 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
TMC4-204ENST00000497518 KDM4FA0A1W2PPD8 638 aa23.66■■□□□ 1.38
TMC4-204ENST00000497518 ABCA9Q8IUA7 1624 aa23.64■■□□□ 1.38
TMC4-204ENST00000497518 PLEKHD1A6NEE1 506 aa23.59■■□□□ 1.37
TMC4-204ENST00000497518 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
TMC4-204ENST00000497518 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
TMC4-204ENST00000497518 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
TMC4-204ENST00000497518 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
TMC4-204ENST00000497518 NEO1Q92859 1461 aa23.53■■□□□ 1.36
TMC4-204ENST00000497518 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
TMC4-204ENST00000497518 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
TMC4-204ENST00000497518 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
TMC4-204ENST00000497518 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
TMC4-204ENST00000497518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
TMC4-204ENST00000497518 CFAP74Q9C0B2 1584 aa23.43■■□□□ 1.34
TMC4-204ENST00000497518 RAPGEF3O95398 923 aa23.42■■□□□ 1.34
TMC4-204ENST00000497518 CDK11AQ9UQ88 783 aaPredicted RBP23.42■■□□□ 1.34
TMC4-204ENST00000497518 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
TMC4-204ENST00000497518 FANCAO15360 1455 aa23.4■■□□□ 1.34
TMC4-204ENST00000497518 AKNAQ7Z591 1439 aa23.37■■□□□ 1.33
TMC4-204ENST00000497518 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
TMC4-204ENST00000497518 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
TMC4-204ENST00000497518 CLIP1P30622 1438 aa23.32■■□□□ 1.32
TMC4-204ENST00000497518 PLCH2O75038 1416 aa23.31■■□□□ 1.32
TMC4-204ENST00000497518 KIF14Q15058 1648 aa23.3■■□□□ 1.32
TMC4-204ENST00000497518 TROQ12816 1431 aaPredicted RBP23.3■■□□□ 1.32
TMC4-204ENST00000497518 RICTORQ6R327 1708 aa23.29■■□□□ 1.32
TMC4-204ENST00000497518 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
TMC4-204ENST00000497518 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
TMC4-204ENST00000497518 MYO5CQ9NQX4 1742 aa23.27■■□□□ 1.32
TMC4-204ENST00000497518 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
TMC4-204ENST00000497518 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
TMC4-204ENST00000497518 PCF11O94913 1555 aaKnown RBP23.27■■□□□ 1.32
TMC4-204ENST00000497518 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
TMC4-204ENST00000497518 LRRIQ1Q96JM4 1722 aa23.24■■□□□ 1.31
TMC4-204ENST00000497518 ZMYM4Q5VZL5 1548 aa23.23■■□□□ 1.31
TMC4-204ENST00000497518 SCAPERQ9BY12 1400 aa23.23■■□□□ 1.31
TMC4-204ENST00000497518 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms