RNA–Protein interactions for RNA: ENST00000497355.5

FOXP1-215, Transcript of forkhead box P1, humanhuman

TSL 1 (best)

Gene FOXP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-215ENST00000497355 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
FOXP1-215ENST00000497355 KIF21AQ7Z4S6 1674 aa11.41□□□□□ -0.58
FOXP1-215ENST00000497355 CFAP43Q8NDM7 1665 aa11.41□□□□□ -0.58
FOXP1-215ENST00000497355 CCNB3Q8WWL7 1395 aa11.4□□□□□ -0.59
FOXP1-215ENST00000497355 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
FOXP1-215ENST00000497355 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
FOXP1-215ENST00000497355 CLSPNQ9HAW4 1339 aa11.38□□□□□ -0.59
FOXP1-215ENST00000497355 DHX57Q6P158 1386 aaKnown RBP11.38□□□□□ -0.59
FOXP1-215ENST00000497355 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
FOXP1-215ENST00000497355 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
FOXP1-215ENST00000497355 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
FOXP1-215ENST00000497355 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
FOXP1-215ENST00000497355 EFCAB5A4FU69 1503 aa11.37□□□□□ -0.59
FOXP1-215ENST00000497355 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
FOXP1-215ENST00000497355 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
FOXP1-215ENST00000497355 FHOD3Q2V2M9 1422 aa11.34□□□□□ -0.59
FOXP1-215ENST00000497355 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
FOXP1-215ENST00000497355 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■■■■ 26.9
FOXP1-215ENST00000497355 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
FOXP1-215ENST00000497355 FYCO1Q9BQS8 1478 aa11.33□□□□□ -0.6
FOXP1-215ENST00000497355 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
FOXP1-215ENST00000497355 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
FOXP1-215ENST00000497355 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
FOXP1-215ENST00000497355 SCAF1Q9H7N4 1312 aaKnown RBP11.31□□□□□ -0.6
FOXP1-215ENST00000497355 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
FOXP1-215ENST00000497355 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
FOXP1-215ENST00000497355 ITGAEP38570 1179 aa11.28□□□□□ -0.6
FOXP1-215ENST00000497355 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
FOXP1-215ENST00000497355 FMN1Q68DA7 1419 aa11.27□□□□□ -0.6
FOXP1-215ENST00000497355 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
FOXP1-215ENST00000497355 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
FOXP1-215ENST00000497355 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
FOXP1-215ENST00000497355 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
FOXP1-215ENST00000497355 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
FOXP1-215ENST00000497355 MAPKBP1O60336 1514 aa11.23□□□□□ -0.61
FOXP1-215ENST00000497355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
FOXP1-215ENST00000497355 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
FOXP1-215ENST00000497355 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
FOXP1-215ENST00000497355 MIER1Q8N108 512 aa11.22□□□□□ -0.61
FOXP1-215ENST00000497355 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
FOXP1-215ENST00000497355 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
FOXP1-215ENST00000497355 THOC2Q8NI27 1593 aaKnown RBP11.21□□□□□ -0.61
FOXP1-215ENST00000497355 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
FOXP1-215ENST00000497355 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
FOXP1-215ENST00000497355 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
FOXP1-215ENST00000497355 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
FOXP1-215ENST00000497355 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
FOXP1-215ENST00000497355 MTUS2Q5JR59 1369 aa11.17□□□□□ -0.62
FOXP1-215ENST00000497355 WDR62O43379 1518 aa11.16□□□□□ -0.62
FOXP1-215ENST00000497355 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
FOXP1-215ENST00000497355 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
FOXP1-215ENST00000497355 IFT140Q96RY7 1462 aa11.15□□□□□ -0.63
FOXP1-215ENST00000497355 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 MAGI3Q5TCQ9 1506 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
FOXP1-215ENST00000497355 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
FOXP1-215ENST00000497355 PTPRKQ15262 1439 aa11.12□□□□□ -0.63
FOXP1-215ENST00000497355 PTPN23Q9H3S7 1636 aa11.11□□□□□ -0.63
FOXP1-215ENST00000497355 SIN3AQ96ST3 1273 aa11.11□□□□□ -0.63
FOXP1-215ENST00000497355 GTF3C3Q9Y5Q9 886 aa11.11□□□□□ -0.63
FOXP1-215ENST00000497355 YTHDC1Q96MU7 727 aaKnown RBP11.1□□□□□ -0.63
FOXP1-215ENST00000497355 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
FOXP1-215ENST00000497355 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
FOXP1-215ENST00000497355 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
FOXP1-215ENST00000497355 HFM1A2PYH4 1435 aa11.08□□□□□ -0.64
FOXP1-215ENST00000497355 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
FOXP1-215ENST00000497355 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
FOXP1-215ENST00000497355 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
FOXP1-215ENST00000497355 MSH5O43196 834 aa11.06□□□□□ -0.64
FOXP1-215ENST00000497355 NAIPQ13075 1403 aa11.06□□□□□ -0.64
FOXP1-215ENST00000497355 CDK13Q14004 1512 aaKnown RBP11.06□□□□□ -0.64
FOXP1-215ENST00000497355 DISP1Q96F81 1524 aa11.05□□□□□ -0.64
FOXP1-215ENST00000497355 UACAQ9BZF9 1416 aa11.05□□□□□ -0.64
FOXP1-215ENST00000497355 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
FOXP1-215ENST00000497355 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
FOXP1-215ENST00000497355 PPP1R15AO75807 674 aaPredicted RBP11.03□□□□□ -0.64
FOXP1-215ENST00000497355 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
FOXP1-215ENST00000497355 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
FOXP1-215ENST00000497355 MIA2Q96PC5 1412 aa11.02□□□□□ -0.65
FOXP1-215ENST00000497355 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
FOXP1-215ENST00000497355 MYT1Q01538 1121 aa11□□□□□ -0.65
FOXP1-215ENST00000497355 CEP170Q5SW79 1584 aa11□□□□□ -0.65
FOXP1-215ENST00000497355 KDM6BO15054 1643 aa10.99□□□□□ -0.65
FOXP1-215ENST00000497355 NUP153P49790 1475 aaKnown RBP10.99□□□□□ -0.65
FOXP1-215ENST00000497355 AKNAQ7Z591 1439 aa10.98□□□□□ -0.65
FOXP1-215ENST00000497355 SYNJ2O15056 1496 aa10.98□□□□□ -0.65
FOXP1-215ENST00000497355 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
FOXP1-215ENST00000497355 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
FOXP1-215ENST00000497355 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
FOXP1-215ENST00000497355 TONSLQ96HA7 1378 aa10.96□□□□□ -0.66
FOXP1-215ENST00000497355 DNMT1P26358 1616 aaKnown RBP10.96□□□□□ -0.66
FOXP1-215ENST00000497355 DENND4BO75064 1496 aaPredicted RBP10.95□□□□□ -0.66
FOXP1-215ENST00000497355 KDM5BQ9UGL1 1544 aa10.95□□□□□ -0.66
FOXP1-215ENST00000497355 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
FOXP1-215ENST00000497355 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
FOXP1-215ENST00000497355 NUP160Q12769 1436 aa10.93□□□□□ -0.66
FOXP1-215ENST00000497355 DAPK1P53355 1430 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms