RNA–Protein interactions for RNA: ENST00000497053.2

LAMA5-213, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-213ENST00000497053 NUP160Q12769 1436 aa24.49■■□□□ 1.51
LAMA5-213ENST00000497053 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
LAMA5-213ENST00000497053 CUL7Q14999 1698 aa24.41■■□□□ 1.5
LAMA5-213ENST00000497053 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
LAMA5-213ENST00000497053 IGF1RP08069 1367 aa24.41■■□□□ 1.5
LAMA5-213ENST00000497053 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
LAMA5-213ENST00000497053 PRXQ9BXM0 1461 aa24.39■■□□□ 1.5
LAMA5-213ENST00000497053 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
LAMA5-213ENST00000497053 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
LAMA5-213ENST00000497053 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
LAMA5-213ENST00000497053 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
LAMA5-213ENST00000497053 PRG4Q92954 1404 aaPredicted RBP24.25■■□□□ 1.47
LAMA5-213ENST00000497053 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
LAMA5-213ENST00000497053 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
LAMA5-213ENST00000497053 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
LAMA5-213ENST00000497053 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
LAMA5-213ENST00000497053 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
LAMA5-213ENST00000497053 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
LAMA5-213ENST00000497053 ADCY10Q96PN6 1610 aa23.97■■□□□ 1.43
LAMA5-213ENST00000497053 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
LAMA5-213ENST00000497053 KIF13AQ9H1H9 1805 aa23.95■■□□□ 1.42
LAMA5-213ENST00000497053 CLIP1P30622 1438 aa23.94■■□□□ 1.42
LAMA5-213ENST00000497053 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
LAMA5-213ENST00000497053 MAPKBP1O60336 1514 aa23.93■■□□□ 1.42
LAMA5-213ENST00000497053 CARMIL2Q6F5E8 1435 aa23.9■■□□□ 1.42
LAMA5-213ENST00000497053 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
LAMA5-213ENST00000497053 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
LAMA5-213ENST00000497053 PTPRGP23470 1445 aa23.87■■□□□ 1.41
LAMA5-213ENST00000497053 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
LAMA5-213ENST00000497053 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
LAMA5-213ENST00000497053 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
LAMA5-213ENST00000497053 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
LAMA5-213ENST00000497053 SAMD9Q5K651 1589 aa23.82■■□□□ 1.4
LAMA5-213ENST00000497053 EFCAB5A4FU69 1503 aa23.81■■□□□ 1.4
LAMA5-213ENST00000497053 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
LAMA5-213ENST00000497053 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
LAMA5-213ENST00000497053 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
LAMA5-213ENST00000497053 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
LAMA5-213ENST00000497053 KIAA0556O60303 1618 aa23.71■■□□□ 1.39
LAMA5-213ENST00000497053 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
LAMA5-213ENST00000497053 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
LAMA5-213ENST00000497053 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
LAMA5-213ENST00000497053 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
LAMA5-213ENST00000497053 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
LAMA5-213ENST00000497053 P3H3Q8IVL6 736 aa23.65■■□□□ 1.38
LAMA5-213ENST00000497053 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
LAMA5-213ENST00000497053 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
LAMA5-213ENST00000497053 KDM6BO15054 1643 aa23.62■■□□□ 1.37
LAMA5-213ENST00000497053 PCF11O94913 1555 aaKnown RBP23.61■■□□□ 1.37
LAMA5-213ENST00000497053 KDM5BQ9UGL1 1544 aa23.59■■□□□ 1.37
LAMA5-213ENST00000497053 GLI2P10070 1586 aa23.58■■□□□ 1.37
LAMA5-213ENST00000497053 ZCCHC11Q5TAX3 1644 aaKnown RBP23.58■■□□□ 1.36
LAMA5-213ENST00000497053 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
LAMA5-213ENST00000497053 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
LAMA5-213ENST00000497053 PPRC1Q5VV67 1664 aaKnown RBP23.5■■□□□ 1.35
LAMA5-213ENST00000497053 LRRIQ1Q96JM4 1722 aa23.48■■□□□ 1.35
LAMA5-213ENST00000497053 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
LAMA5-213ENST00000497053 ABCA8O94911 1581 aa23.48■■□□□ 1.35
LAMA5-213ENST00000497053 CFAP43Q8NDM7 1665 aa23.46■■□□□ 1.35
LAMA5-213ENST00000497053 CASKIN1Q8WXD9 1431 aa23.46■■□□□ 1.35
LAMA5-213ENST00000497053 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
LAMA5-213ENST00000497053 WDR7Q9Y4E6 1490 aa23.45■■□□□ 1.34
LAMA5-213ENST00000497053 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
LAMA5-213ENST00000497053 RAPGEF6Q8TEU7 1601 aa23.43■■□□□ 1.34
LAMA5-213ENST00000497053 TEX14Q8IWB6 1497 aa23.41■■□□□ 1.34
LAMA5-213ENST00000497053 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
LAMA5-213ENST00000497053 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
LAMA5-213ENST00000497053 MAP3K1Q13233 1512 aa23.33■■□□□ 1.32
LAMA5-213ENST00000497053 NUP153P49790 1475 aaKnown RBP23.31■■□□□ 1.32
LAMA5-213ENST00000497053 ATP1B4Q9UN42 357 aaPredicted RBP23.31■■□□□ 1.32
LAMA5-213ENST00000497053 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
LAMA5-213ENST00000497053 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
LAMA5-213ENST00000497053 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
LAMA5-213ENST00000497053 CD109Q6YHK3 1445 aa23.29■■□□□ 1.32
LAMA5-213ENST00000497053 APLP2Q06481 763 aa23.28■■□□□ 1.32
LAMA5-213ENST00000497053 CCDC18Q5T9S5 1454 aa23.28■■□□□ 1.32
LAMA5-213ENST00000497053 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
LAMA5-213ENST00000497053 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
LAMA5-213ENST00000497053 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
LAMA5-213ENST00000497053 ATP10BO94823 1461 aa23.25■■□□□ 1.31
LAMA5-213ENST00000497053 KANK4Q5T7N3 995 aaPredicted RBP23.22■■□□□ 1.31
LAMA5-213ENST00000497053 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
LAMA5-213ENST00000497053 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
LAMA5-213ENST00000497053 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
LAMA5-213ENST00000497053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
LAMA5-213ENST00000497053 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
LAMA5-213ENST00000497053 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
LAMA5-213ENST00000497053 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
LAMA5-213ENST00000497053 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
LAMA5-213ENST00000497053 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.28
LAMA5-213ENST00000497053 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
LAMA5-213ENST00000497053 KIF14Q15058 1648 aa23.04■■□□□ 1.28
LAMA5-213ENST00000497053 TROQ12816 1431 aaPredicted RBP23.02■■□□□ 1.28
LAMA5-213ENST00000497053 NCOA2Q15596 1464 aa23.02■■□□□ 1.28
LAMA5-213ENST00000497053 NEO1Q92859 1461 aa23.02■■□□□ 1.28
LAMA5-213ENST00000497053 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
LAMA5-213ENST00000497053 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
LAMA5-213ENST00000497053 CDK11AQ9UQ88 783 aaPredicted RBP22.94■■□□□ 1.26
LAMA5-213ENST00000497053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.263e-7■■■■■ 59
LAMA5-213ENST00000497053 RAPGEF3O95398 923 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms