RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 KIAA0586Q9BVV6 1533 aa32.25■■■□□ 2.75
CTDSP1-213ENST00000496785 ARAP1Q96P48 1450 aa32.24■■■□□ 2.75
CTDSP1-213ENST00000496785 CYB5RLQ6IPT4 315 aa32.19■■■□□ 2.74
CTDSP1-213ENST00000496785 JPH4Q96JJ6 628 aa32.18■■■□□ 2.74
CTDSP1-213ENST00000496785 PRXQ9BXM0 1461 aa32.14■■■□□ 2.74
CTDSP1-213ENST00000496785 CSRNP3Q8WYN3 585 aa32.13■■■□□ 2.73
CTDSP1-213ENST00000496785 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
CTDSP1-213ENST00000496785 IQGAP2Q13576 1575 aa32.07■■■□□ 2.72
CTDSP1-213ENST00000496785 ERCC6L2Q5T890 1561 aa32.07■■■□□ 2.72
CTDSP1-213ENST00000496785 CARMIL2Q6F5E8 1435 aa31.96■■■□□ 2.71
CTDSP1-213ENST00000496785 CTTNBP2Q8WZ74 1663 aa31.95■■■□□ 2.71
CTDSP1-213ENST00000496785 FAM9AQ8IZU1 332 aaPredicted RBP31.95■■■□□ 2.71
CTDSP1-213ENST00000496785 UGGT2Q9NYU1 1516 aa31.89■■■□□ 2.7
CTDSP1-213ENST00000496785 KIF21BO75037 1637 aa31.86■■■□□ 2.69
CTDSP1-213ENST00000496785 TNIKQ9UKE5 1360 aa31.81■■■□□ 2.68
CTDSP1-213ENST00000496785 DISP1Q96F81 1524 aa31.79■■■□□ 2.68
CTDSP1-213ENST00000496785 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
CTDSP1-213ENST00000496785 PTPRGP23470 1445 aa31.77■■■□□ 2.68
CTDSP1-213ENST00000496785 KIAA0556O60303 1618 aa31.75■■■□□ 2.67
CTDSP1-213ENST00000496785 NPM1P06748 294 aaKnown RBP eCLIP31.63■■■□□ 2.65
CTDSP1-213ENST00000496785 TTBK1Q5TCY1 1321 aaPredicted RBP31.63■■■□□ 2.65
CTDSP1-213ENST00000496785 ADCY10Q96PN6 1610 aa31.6■■■□□ 2.65
CTDSP1-213ENST00000496785 TRHP20396 242 aaPredicted RBP31.58■■■□□ 2.65
CTDSP1-213ENST00000496785 UBTFP17480 764 aaKnown RBP31.57■■■□□ 2.64
CTDSP1-213ENST00000496785 UACAQ9BZF9 1416 aa31.56■■■□□ 2.64
CTDSP1-213ENST00000496785 UHRF1BP1LA0JNW5 1464 aa31.54■■■□□ 2.64
CTDSP1-213ENST00000496785 SAMD9Q5K651 1589 aa31.53■■■□□ 2.64
CTDSP1-213ENST00000496785 ABCC2Q92887 1545 aa31.5■■■□□ 2.63
CTDSP1-213ENST00000496785 EHMT2Q96KQ7 1210 aa31.48■■■□□ 2.63
CTDSP1-213ENST00000496785 EFCAB5A4FU69 1503 aa31.47■■■□□ 2.63
CTDSP1-213ENST00000496785 MAPKBP1O60336 1514 aa31.47■■■□□ 2.63
CTDSP1-213ENST00000496785 RANGAP1P46060 587 aaPredicted RBP31.43■■■□□ 2.62
CTDSP1-213ENST00000496785 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
CTDSP1-213ENST00000496785 PLB1Q6P1J6 1458 aa31.39■■■□□ 2.62
CTDSP1-213ENST00000496785 ABCA8O94911 1581 aa31.38■■■□□ 2.61
CTDSP1-213ENST00000496785 KDM5BQ9UGL1 1544 aa31.37■■■□□ 2.61
CTDSP1-213ENST00000496785 FHOD3Q2V2M9 1422 aa31.32■■■□□ 2.61
CTDSP1-213ENST00000496785 ABCC10Q5T3U5 1492 aa31.3■■■□□ 2.6
CTDSP1-213ENST00000496785 ZCCHC11Q5TAX3 1644 aaKnown RBP31.27■■■□□ 2.6
CTDSP1-213ENST00000496785 ASXL2Q76L83 1435 aa31.26■■■□□ 2.6
CTDSP1-213ENST00000496785 RAPGEF6Q8TEU7 1601 aa31.24■■■□□ 2.59
CTDSP1-213ENST00000496785 DIP2BQ9P265 1576 aa31.23■■■□□ 2.59
CTDSP1-213ENST00000496785 ARHGAP35Q9NRY4 1499 aa31.22■■■□□ 2.59
CTDSP1-213ENST00000496785 KIF13AQ9H1H9 1805 aa31.21■■■□□ 2.59
CTDSP1-213ENST00000496785 FAM69CQ0P6D2 419 aa31.21■■■□□ 2.59
CTDSP1-213ENST00000496785 FMN1Q68DA7 1419 aa31.19■■■□□ 2.58
CTDSP1-213ENST00000496785 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.57
CTDSP1-213ENST00000496785 GLI2P10070 1586 aa31.1■■■□□ 2.57
CTDSP1-213ENST00000496785 ATP10BO94823 1461 aa31.1■■■□□ 2.57
CTDSP1-213ENST00000496785 NUP153P49790 1475 aaKnown RBP31.09■■■□□ 2.57
CTDSP1-213ENST00000496785 CLIP1P30622 1438 aa31.09■■■□□ 2.57
CTDSP1-213ENST00000496785 EPRSP07814 1512 aaKnown RBP31.08■■■□□ 2.57
CTDSP1-213ENST00000496785 ARID3CA6NKF2 412 aa31.05■■■□□ 2.56
CTDSP1-213ENST00000496785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.04■■■□□ 2.56
CTDSP1-213ENST00000496785 HNRNPUL2Q1KMD3 747 aaKnown RBP31.04■■■□□ 2.56
CTDSP1-213ENST00000496785 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
CTDSP1-213ENST00000496785 CEP162Q5TB80 1403 aa30.94■■■□□ 2.54
CTDSP1-213ENST00000496785 KCNH8Q96L42 1107 aa30.93■■■□□ 2.54
CTDSP1-213ENST00000496785 ATP1B4Q9UN42 357 aaPredicted RBP30.93■■■□□ 2.54
CTDSP1-213ENST00000496785 MAP3K4Q9Y6R4 1608 aa30.92■■■□□ 2.54
CTDSP1-213ENST00000496785 PLEKHD1A6NEE1 506 aa30.92■■■□□ 2.54
CTDSP1-213ENST00000496785 TSPOAP1O95153 1857 aa30.91■■■□□ 2.54
CTDSP1-213ENST00000496785 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
CTDSP1-213ENST00000496785 CFAP43Q8NDM7 1665 aa30.89■■■□□ 2.54
CTDSP1-213ENST00000496785 CASKIN1Q8WXD9 1431 aa30.89■■■□□ 2.53
CTDSP1-213ENST00000496785 TEX14Q8IWB6 1497 aa30.88■■■□□ 2.53
CTDSP1-213ENST00000496785 CDK11AQ9UQ88 783 aaPredicted RBP30.86■■■□□ 2.53
CTDSP1-213ENST00000496785 CDK13Q14004 1512 aaKnown RBP30.86■■■□□ 2.53
CTDSP1-213ENST00000496785 PCF11O94913 1555 aaKnown RBP30.85■■■□□ 2.53
CTDSP1-213ENST00000496785 FYCO1Q9BQS8 1478 aa30.85■■■□□ 2.53
CTDSP1-213ENST00000496785 CD109Q6YHK3 1445 aa30.84■■■□□ 2.53
CTDSP1-213ENST00000496785 CCDC18Q5T9S5 1454 aa30.82■■■□□ 2.53
CTDSP1-213ENST00000496785 PPRC1Q5VV67 1664 aaKnown RBP30.81■■■□□ 2.52
CTDSP1-213ENST00000496785 ABCA9Q8IUA7 1624 aa30.8■■■□□ 2.52
CTDSP1-213ENST00000496785 MAGI3Q5TCQ9 1506 aa30.79■■■□□ 2.52
CTDSP1-213ENST00000496785 KDM6BO15054 1643 aa30.76■■■□□ 2.51
CTDSP1-213ENST00000496785 LRRIQ1Q96JM4 1722 aa30.7■■■□□ 2.5
CTDSP1-213ENST00000496785 TROQ12816 1431 aaPredicted RBP30.69■■■□□ 2.5
CTDSP1-213ENST00000496785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.64■■■□□ 2.5
CTDSP1-213ENST00000496785 KIF14Q15058 1648 aa30.64■■■□□ 2.5
CTDSP1-213ENST00000496785 PHLDB1Q86UU1 1377 aa30.64■■■□□ 2.5
CTDSP1-213ENST00000496785 VPS8Q8N3P4 1428 aa30.6■■■□□ 2.49
CTDSP1-213ENST00000496785 TTC37Q6PGP7 1564 aa30.59■■■□□ 2.49
CTDSP1-213ENST00000496785 NEO1Q92859 1461 aa30.59■■■□□ 2.49
CTDSP1-213ENST00000496785 CFAP74Q9C0B2 1584 aa30.55■■■□□ 2.48
CTDSP1-213ENST00000496785 ARAP3Q8WWN8 1544 aa30.52■■■□□ 2.48
CTDSP1-213ENST00000496785 PLCH2O75038 1416 aa30.5■■■□□ 2.47
CTDSP1-213ENST00000496785 FANCAO15360 1455 aa30.5■■■□□ 2.47
CTDSP1-213ENST00000496785 COL17A1Q9UMD9 1497 aaPredicted RBP30.5■■■□□ 2.47
CTDSP1-213ENST00000496785 MYO5CQ9NQX4 1742 aa30.49■■■□□ 2.47
CTDSP1-213ENST00000496785 MTUS2Q5JR59 1369 aa30.49■■■□□ 2.47
CTDSP1-213ENST00000496785 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
CTDSP1-213ENST00000496785 AKNAQ7Z591 1439 aa30.43■■■□□ 2.46
CTDSP1-213ENST00000496785 EFCAB2Q5VUJ9 269 aa30.42■■■□□ 2.46
CTDSP1-213ENST00000496785 TIAM1Q13009 1591 aa30.39■■■□□ 2.46
CTDSP1-213ENST00000496785 ARHGAP5Q13017 1502 aa30.38■■■□□ 2.45
CTDSP1-213ENST00000496785 DENND4BO75064 1496 aaPredicted RBP30.37■■■□□ 2.45
CTDSP1-213ENST00000496785 MAP3K1Q13233 1512 aa30.37■■■□□ 2.45
CTDSP1-213ENST00000496785 PREX2Q70Z35 1606 aa30.35■■■□□ 2.45
CTDSP1-213ENST00000496785 ADGRL1O94910 1474 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms