RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 EEA1Q15075 1411 aa12.75□□□□□ -0.37
CDHR3-214ENST00000496633 ARAP1Q96P48 1450 aa12.74□□□□□ -0.37
CDHR3-214ENST00000496633 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
CDHR3-214ENST00000496633 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
CDHR3-214ENST00000496633 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
CDHR3-214ENST00000496633 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
CDHR3-214ENST00000496633 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
CDHR3-214ENST00000496633 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
CDHR3-214ENST00000496633 FAM9AQ8IZU1 332 aaPredicted RBP12.65□□□□□ -0.38
CDHR3-214ENST00000496633 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
CDHR3-214ENST00000496633 PRXQ9BXM0 1461 aa12.65□□□□□ -0.38
CDHR3-214ENST00000496633 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDHR3-214ENST00000496633 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
CDHR3-214ENST00000496633 CTTNBP2Q8WZ74 1663 aa12.6□□□□□ -0.39
CDHR3-214ENST00000496633 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
CDHR3-214ENST00000496633 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
CDHR3-214ENST00000496633 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
CDHR3-214ENST00000496633 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-214ENST00000496633 PTPRGP23470 1445 aa12.57□□□□□ -0.4
CDHR3-214ENST00000496633 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
CDHR3-214ENST00000496633 KIF21BO75037 1637 aa12.52□□□□□ -0.4
CDHR3-214ENST00000496633 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
CDHR3-214ENST00000496633 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
CDHR3-214ENST00000496633 UHRF1BP1LA0JNW5 1464 aa12.5□□□□□ -0.41
CDHR3-214ENST00000496633 MAPKBP1O60336 1514 aa12.49□□□□□ -0.41
CDHR3-214ENST00000496633 UACAQ9BZF9 1416 aa12.48□□□□□ -0.41
CDHR3-214ENST00000496633 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
CDHR3-214ENST00000496633 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
CDHR3-214ENST00000496633 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
CDHR3-214ENST00000496633 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
CDHR3-214ENST00000496633 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
CDHR3-214ENST00000496633 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
CDHR3-214ENST00000496633 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
CDHR3-214ENST00000496633 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
CDHR3-214ENST00000496633 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
CDHR3-214ENST00000496633 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
CDHR3-214ENST00000496633 ABCA8O94911 1581 aa12.38□□□□□ -0.43
CDHR3-214ENST00000496633 ASXL2Q76L83 1435 aa12.36□□□□□ -0.43
CDHR3-214ENST00000496633 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
CDHR3-214ENST00000496633 KIF13AQ9H1H9 1805 aa12.35□□□□□ -0.43
CDHR3-214ENST00000496633 GLI2P10070 1586 aa12.35□□□□□ -0.43
CDHR3-214ENST00000496633 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
CDHR3-214ENST00000496633 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
CDHR3-214ENST00000496633 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
CDHR3-214ENST00000496633 RAPGEF6Q8TEU7 1601 aa12.32□□□□□ -0.44
CDHR3-214ENST00000496633 WDR7Q9Y4E6 1490 aa12.32□□□□□ -0.44
CDHR3-214ENST00000496633 TEX14Q8IWB6 1497 aa12.29□□□□□ -0.44
CDHR3-214ENST00000496633 EPRSP07814 1512 aaKnown RBP12.29□□□□□ -0.44
CDHR3-214ENST00000496633 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
CDHR3-214ENST00000496633 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
CDHR3-214ENST00000496633 ATP10BO94823 1461 aa12.27□□□□□ -0.45
CDHR3-214ENST00000496633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
CDHR3-214ENST00000496633 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
CDHR3-214ENST00000496633 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
CDHR3-214ENST00000496633 PLEKHD1A6NEE1 506 aa12.25□□□□□ -0.45
CDHR3-214ENST00000496633 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
CDHR3-214ENST00000496633 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
CDHR3-214ENST00000496633 MAP3K4Q9Y6R4 1608 aa12.24□□□□□ -0.45
CDHR3-214ENST00000496633 HECW1Q76N89 1606 aa12.23□□□□□ -0.45
CDHR3-214ENST00000496633 NUP153P49790 1475 aaKnown RBP12.23□□□□□ -0.45
CDHR3-214ENST00000496633 PHLDB1Q86UU1 1377 aa12.23□□□□□ -0.45
CDHR3-214ENST00000496633 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
CDHR3-214ENST00000496633 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
CDHR3-214ENST00000496633 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
CDHR3-214ENST00000496633 KCNH8Q96L42 1107 aa12.21□□□□□ -0.45
CDHR3-214ENST00000496633 KDM6BO15054 1643 aa12.21□□□□□ -0.46
CDHR3-214ENST00000496633 TSPOAP1O95153 1857 aa12.21□□□□□ -0.46
CDHR3-214ENST00000496633 CLIP1P30622 1438 aa12.2□□□□□ -0.46
CDHR3-214ENST00000496633 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
CDHR3-214ENST00000496633 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
CDHR3-214ENST00000496633 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
CDHR3-214ENST00000496633 CASKIN1Q8WXD9 1431 aa12.17□□□□□ -0.46
CDHR3-214ENST00000496633 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
CDHR3-214ENST00000496633 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
CDHR3-214ENST00000496633 PPRC1Q5VV67 1664 aaKnown RBP12.15□□□□□ -0.46
CDHR3-214ENST00000496633 NEO1Q92859 1461 aa12.14□□□□□ -0.47
CDHR3-214ENST00000496633 CFAP74Q9C0B2 1584 aa12.13□□□□□ -0.47
CDHR3-214ENST00000496633 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
CDHR3-214ENST00000496633 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
CDHR3-214ENST00000496633 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
CDHR3-214ENST00000496633 KIF14Q15058 1648 aa12.1□□□□□ -0.47
CDHR3-214ENST00000496633 CDK13Q14004 1512 aaKnown RBP12.1□□□□□ -0.47
CDHR3-214ENST00000496633 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
CDHR3-214ENST00000496633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDHR3-214ENST00000496633 PLCH2O75038 1416 aa12.06□□□□□ -0.48
CDHR3-214ENST00000496633 EFCAB2Q5VUJ9 269 aa12.06□□□□□ -0.48
CDHR3-214ENST00000496633 FANCAO15360 1455 aa12.06□□□□□ -0.48
CDHR3-214ENST00000496633 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
CDHR3-214ENST00000496633 AKNAQ7Z591 1439 aa12.03□□□□□ -0.48
CDHR3-214ENST00000496633 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
CDHR3-214ENST00000496633 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
CDHR3-214ENST00000496633 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
CDHR3-214ENST00000496633 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
CDHR3-214ENST00000496633 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
CDHR3-214ENST00000496633 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
CDHR3-214ENST00000496633 LOC105371045A0A1W2PR82 267 aa12.01□□□□□ -0.49
CDHR3-214ENST00000496633 VPS8Q8N3P4 1428 aa12.01□□□□□ -0.49
CDHR3-214ENST00000496633 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
CDHR3-214ENST00000496633 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
CDHR3-214ENST00000496633 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms