RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 KIAA0586Q9BVV6 1533 aa27.41■■□□□ 1.98
DNMT3A-215ENST00000496570 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
DNMT3A-215ENST00000496570 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
DNMT3A-215ENST00000496570 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
DNMT3A-215ENST00000496570 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
DNMT3A-215ENST00000496570 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
DNMT3A-215ENST00000496570 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
DNMT3A-215ENST00000496570 EEA1Q15075 1411 aa27.16■■□□□ 1.94
DNMT3A-215ENST00000496570 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
DNMT3A-215ENST00000496570 CTTNBP2Q8WZ74 1663 aa27.12■■□□□ 1.93
DNMT3A-215ENST00000496570 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
DNMT3A-215ENST00000496570 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
DNMT3A-215ENST00000496570 CARMIL2Q6F5E8 1435 aa27.04■■□□□ 1.92
DNMT3A-215ENST00000496570 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-215ENST00000496570 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
DNMT3A-215ENST00000496570 ADCY10Q96PN6 1610 aa27.01■■□□□ 1.91
DNMT3A-215ENST00000496570 KIAA0556O60303 1618 aa27■■□□□ 1.91
DNMT3A-215ENST00000496570 PTPRGP23470 1445 aa26.99■■□□□ 1.91
DNMT3A-215ENST00000496570 KIF21BO75037 1637 aa26.95■■□□□ 1.91
DNMT3A-215ENST00000496570 TRHP20396 242 aaPredicted RBP26.92■■□□□ 1.9
DNMT3A-215ENST00000496570 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
DNMT3A-215ENST00000496570 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
DNMT3A-215ENST00000496570 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
DNMT3A-215ENST00000496570 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
DNMT3A-215ENST00000496570 UACAQ9BZF9 1416 aa26.82■■□□□ 1.88
DNMT3A-215ENST00000496570 ABCC2Q92887 1545 aa26.8■■□□□ 1.88
DNMT3A-215ENST00000496570 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
DNMT3A-215ENST00000496570 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.88
DNMT3A-215ENST00000496570 NPM1P06748 294 aaKnown RBP eCLIP26.76■■□□□ 1.87
DNMT3A-215ENST00000496570 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
DNMT3A-215ENST00000496570 ABCA8O94911 1581 aa26.73■■□□□ 1.87
DNMT3A-215ENST00000496570 KDM5BQ9UGL1 1544 aa26.72■■□□□ 1.87
DNMT3A-215ENST00000496570 ABCC10Q5T3U5 1492 aa26.72■■□□□ 1.87
DNMT3A-215ENST00000496570 P3H3Q8IVL6 736 aa26.7■■□□□ 1.86
DNMT3A-215ENST00000496570 DIP2BQ9P265 1576 aa26.69■■□□□ 1.86
DNMT3A-215ENST00000496570 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
DNMT3A-215ENST00000496570 ZCCHC11Q5TAX3 1644 aaKnown RBP26.66■■□□□ 1.86
DNMT3A-215ENST00000496570 ASXL2Q76L83 1435 aa26.64■■□□□ 1.85
DNMT3A-215ENST00000496570 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
DNMT3A-215ENST00000496570 UBTFP17480 764 aaKnown RBP26.61■■□□□ 1.85
DNMT3A-215ENST00000496570 EFCAB5A4FU69 1503 aa26.6■■□□□ 1.85
DNMT3A-215ENST00000496570 FHOD3Q2V2M9 1422 aa26.6■■□□□ 1.85
DNMT3A-215ENST00000496570 FAM69CQ0P6D2 419 aa26.6■■□□□ 1.85
DNMT3A-215ENST00000496570 RAPGEF6Q8TEU7 1601 aa26.53■■□□□ 1.84
DNMT3A-215ENST00000496570 GLI2P10070 1586 aa26.52■■□□□ 1.84
DNMT3A-215ENST00000496570 ARHGAP35Q9NRY4 1499 aa26.51■■□□□ 1.83
DNMT3A-215ENST00000496570 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
DNMT3A-215ENST00000496570 ATP10BO94823 1461 aa26.49■■□□□ 1.83
DNMT3A-215ENST00000496570 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
DNMT3A-215ENST00000496570 NUP153P49790 1475 aaKnown RBP26.47■■□□□ 1.83
DNMT3A-215ENST00000496570 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
DNMT3A-215ENST00000496570 ARID3CA6NKF2 412 aa26.42■■□□□ 1.82
DNMT3A-215ENST00000496570 TSPOAP1O95153 1857 aa26.41■■□□□ 1.82
DNMT3A-215ENST00000496570 MAP3K4Q9Y6R4 1608 aa26.41■■□□□ 1.82
DNMT3A-215ENST00000496570 FMN1Q68DA7 1419 aa26.33■■□□□ 1.81
DNMT3A-215ENST00000496570 KCNH8Q96L42 1107 aa26.29■■□□□ 1.8
DNMT3A-215ENST00000496570 CFAP43Q8NDM7 1665 aa26.28■■□□□ 1.8
DNMT3A-215ENST00000496570 CDK13Q14004 1512 aaKnown RBP26.26■■□□□ 1.79
DNMT3A-215ENST00000496570 CLIP1P30622 1438 aa26.25■■□□□ 1.79
DNMT3A-215ENST00000496570 KDM6BO15054 1643 aa26.24■■□□□ 1.79
DNMT3A-215ENST00000496570 HECW1Q76N89 1606 aa26.24■■□□□ 1.79
DNMT3A-215ENST00000496570 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 ABCA9Q8IUA7 1624 aa26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 HNRNPUL2Q1KMD3 747 aaKnown RBP26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 MAGI3Q5TCQ9 1506 aa26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
DNMT3A-215ENST00000496570 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
DNMT3A-215ENST00000496570 COL17A1Q9UMD9 1497 aaPredicted RBP26.18■■□□□ 1.78
DNMT3A-215ENST00000496570 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
DNMT3A-215ENST00000496570 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
DNMT3A-215ENST00000496570 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
DNMT3A-215ENST00000496570 PLEKHD1A6NEE1 506 aa26.14■■□□□ 1.78
DNMT3A-215ENST00000496570 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
DNMT3A-215ENST00000496570 ATP1B4Q9UN42 357 aaPredicted RBP26.12■■□□□ 1.77
DNMT3A-215ENST00000496570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
DNMT3A-215ENST00000496570 FYCO1Q9BQS8 1478 aa26.08■■□□□ 1.77
DNMT3A-215ENST00000496570 TTC37Q6PGP7 1564 aa26.07■■□□□ 1.76
DNMT3A-215ENST00000496570 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
DNMT3A-215ENST00000496570 TROQ12816 1431 aaPredicted RBP26.01■■□□□ 1.75
DNMT3A-215ENST00000496570 KIF14Q15058 1648 aa26.01■■□□□ 1.75
DNMT3A-215ENST00000496570 ARAP3Q8WWN8 1544 aa26■■□□□ 1.75
DNMT3A-215ENST00000496570 NEO1Q92859 1461 aa25.98■■□□□ 1.75
DNMT3A-215ENST00000496570 CDK11AQ9UQ88 783 aaPredicted RBP25.97■■□□□ 1.75
DNMT3A-215ENST00000496570 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.74
DNMT3A-215ENST00000496570 PLCH2O75038 1416 aa25.91■■□□□ 1.74
DNMT3A-215ENST00000496570 FANCAO15360 1455 aa25.91■■□□□ 1.74
DNMT3A-215ENST00000496570 FRMPD1Q5SYB0 1578 aa25.89■■□□□ 1.73
DNMT3A-215ENST00000496570 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
DNMT3A-215ENST00000496570 CFAP74Q9C0B2 1584 aa25.87■■□□□ 1.73
DNMT3A-215ENST00000496570 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
DNMT3A-215ENST00000496570 RAPGEF3O95398 923 aa25.83■■□□□ 1.73
DNMT3A-215ENST00000496570 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
DNMT3A-215ENST00000496570 RICTORQ6R327 1708 aa25.81■■□□□ 1.72
DNMT3A-215ENST00000496570 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
DNMT3A-215ENST00000496570 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
DNMT3A-215ENST00000496570 DENND4BO75064 1496 aaPredicted RBP25.78■■□□□ 1.72
DNMT3A-215ENST00000496570 ADGRL1O94910 1474 aa25.76■■□□□ 1.71
DNMT3A-215ENST00000496570 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.71
DNMT3A-215ENST00000496570 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms