RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
UBXN11-216ENST00000496466 RRBP1Q9P2E9 1410 aaKnown RBP22.2■■□□□ 1.14
UBXN11-216ENST00000496466 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
UBXN11-216ENST00000496466 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
UBXN11-216ENST00000496466 FHOD3Q2V2M9 1422 aa22.16■■□□□ 1.14
UBXN11-216ENST00000496466 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
UBXN11-216ENST00000496466 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
UBXN11-216ENST00000496466 MRC2Q9UBG0 1479 aa22.14■■□□□ 1.14
UBXN11-216ENST00000496466 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
UBXN11-216ENST00000496466 EFCAB5A4FU69 1503 aa22.12■■□□□ 1.13
UBXN11-216ENST00000496466 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
UBXN11-216ENST00000496466 ACIN1Q9UKV3 1341 aaKnown RBP22.12■■□□□ 1.13
UBXN11-216ENST00000496466 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
UBXN11-216ENST00000496466 CLSPNQ9HAW4 1339 aa22.11■■□□□ 1.13
UBXN11-216ENST00000496466 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.13
UBXN11-216ENST00000496466 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
UBXN11-216ENST00000496466 LRRC9Q6ZRR7 1453 aa22.08■■□□□ 1.12
UBXN11-216ENST00000496466 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
UBXN11-216ENST00000496466 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.124e-14■■■■■ 52.8
UBXN11-216ENST00000496466 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
UBXN11-216ENST00000496466 CFAP43Q8NDM7 1665 aa22.02■■□□□ 1.12
UBXN11-216ENST00000496466 PBRM1Q86U86 1689 aa22.02■■□□□ 1.11
UBXN11-216ENST00000496466 FYCO1Q9BQS8 1478 aa22.01■■□□□ 1.11
UBXN11-216ENST00000496466 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
UBXN11-216ENST00000496466 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
UBXN11-216ENST00000496466 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
UBXN11-216ENST00000496466 ITGAEP38570 1179 aa21.98■■□□□ 1.11
UBXN11-216ENST00000496466 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
UBXN11-216ENST00000496466 WDR62O43379 1518 aa21.98■■□□□ 1.11
UBXN11-216ENST00000496466 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
UBXN11-216ENST00000496466 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
UBXN11-216ENST00000496466 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
UBXN11-216ENST00000496466 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
UBXN11-216ENST00000496466 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
UBXN11-216ENST00000496466 MIER1Q8N108 512 aa21.91■■□□□ 1.1
UBXN11-216ENST00000496466 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
UBXN11-216ENST00000496466 FAM50AQ14320 339 aaKnown RBP21.86■■□□□ 1.09
UBXN11-216ENST00000496466 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
UBXN11-216ENST00000496466 IQGAP2Q13576 1575 aa21.83■■□□□ 1.09
UBXN11-216ENST00000496466 MYT1Q01538 1121 aa21.83■■□□□ 1.08
UBXN11-216ENST00000496466 LRRIQ1Q96JM4 1722 aa21.82■■□□□ 1.08
UBXN11-216ENST00000496466 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
UBXN11-216ENST00000496466 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
UBXN11-216ENST00000496466 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
UBXN11-216ENST00000496466 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
UBXN11-216ENST00000496466 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
UBXN11-216ENST00000496466 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.07
UBXN11-216ENST00000496466 MAPKBP1O60336 1514 aa21.76■■□□□ 1.07
UBXN11-216ENST00000496466 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
UBXN11-216ENST00000496466 UGGT2Q9NYU1 1516 aa21.71■■□□□ 1.07
UBXN11-216ENST00000496466 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
UBXN11-216ENST00000496466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.06
UBXN11-216ENST00000496466 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
UBXN11-216ENST00000496466 NCOA2Q15596 1464 aa21.69■■□□□ 1.06
UBXN11-216ENST00000496466 MAGI3Q5TCQ9 1506 aa21.67■■□□□ 1.06
UBXN11-216ENST00000496466 EHBP1L1Q8N3D4 1523 aa21.67■■□□□ 1.06
UBXN11-216ENST00000496466 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
UBXN11-216ENST00000496466 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
UBXN11-216ENST00000496466 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
UBXN11-216ENST00000496466 SUPT6HQ7KZ85 1726 aaKnown RBP21.64■■□□□ 1.05
UBXN11-216ENST00000496466 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.05
UBXN11-216ENST00000496466 DISP1Q96F81 1524 aa21.64■■□□□ 1.05
UBXN11-216ENST00000496466 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
UBXN11-216ENST00000496466 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
UBXN11-216ENST00000496466 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
UBXN11-216ENST00000496466 KIAA0556O60303 1618 aa21.61■■□□□ 1.05
UBXN11-216ENST00000496466 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
UBXN11-216ENST00000496466 SYNJ2O15056 1496 aa21.6■■□□□ 1.05
UBXN11-216ENST00000496466 FBLN2P98095 1184 aa21.6■■□□□ 1.05
UBXN11-216ENST00000496466 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
UBXN11-216ENST00000496466 PTPRKQ15262 1439 aa21.58■■□□□ 1.05
UBXN11-216ENST00000496466 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
UBXN11-216ENST00000496466 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
UBXN11-216ENST00000496466 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
UBXN11-216ENST00000496466 TIMELESSQ9UNS1 1208 aa21.5■■□□□ 1.03
UBXN11-216ENST00000496466 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
UBXN11-216ENST00000496466 HFM1A2PYH4 1435 aa21.49■■□□□ 1.03
UBXN11-216ENST00000496466 NUP160Q12769 1436 aa21.48■■□□□ 1.03
UBXN11-216ENST00000496466 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
UBXN11-216ENST00000496466 TCOF1Q13428 1488 aaKnown RBP21.46■■□□□ 1.03
UBXN11-216ENST00000496466 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
UBXN11-216ENST00000496466 NAIPQ13075 1403 aa21.44■■□□□ 1.02
UBXN11-216ENST00000496466 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
UBXN11-216ENST00000496466 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
UBXN11-216ENST00000496466 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
UBXN11-216ENST00000496466 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
UBXN11-216ENST00000496466 UACAQ9BZF9 1416 aa21.39■■□□□ 1.02
UBXN11-216ENST00000496466 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.02
UBXN11-216ENST00000496466 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
UBXN11-216ENST00000496466 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
UBXN11-216ENST00000496466 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
UBXN11-216ENST00000496466 ZNF644Q9H582 1327 aaPredicted RBP21.31■■□□□ 1
UBXN11-216ENST00000496466 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
UBXN11-216ENST00000496466 TONSLQ96HA7 1378 aa21.3■■□□□ 1
UBXN11-216ENST00000496466 DDX10Q13206 875 aaKnown RBP21.29■■□□□ 1
UBXN11-216ENST00000496466 GCC2Q8IWJ2 1684 aa21.28■■□□□ 1
UBXN11-216ENST00000496466 AKNAQ7Z591 1439 aa21.28■■□□□ 1
UBXN11-216ENST00000496466 KDM6BO15054 1643 aa21.27■■□□□ 1
UBXN11-216ENST00000496466 DAPK1P53355 1430 aa21.26■□□□□ 0.99
UBXN11-216ENST00000496466 ABCA8O94911 1581 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms