RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 IGF1RP08069 1367 aa24.88■■□□□ 1.57
VTI1A-209ENST00000496445 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
VTI1A-209ENST00000496445 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
VTI1A-209ENST00000496445 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
VTI1A-209ENST00000496445 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
VTI1A-209ENST00000496445 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
VTI1A-209ENST00000496445 ADCY10Q96PN6 1610 aa24.61■■□□□ 1.53
VTI1A-209ENST00000496445 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
VTI1A-209ENST00000496445 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
VTI1A-209ENST00000496445 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
VTI1A-209ENST00000496445 MAPKBP1O60336 1514 aa24.5■■□□□ 1.51
VTI1A-209ENST00000496445 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
VTI1A-209ENST00000496445 DISP1Q96F81 1524 aa24.46■■□□□ 1.51
VTI1A-209ENST00000496445 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
VTI1A-209ENST00000496445 UGGT2Q9NYU1 1516 aa24.44■■□□□ 1.5
VTI1A-209ENST00000496445 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
VTI1A-209ENST00000496445 PTPRGP23470 1445 aa24.43■■□□□ 1.5
VTI1A-209ENST00000496445 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
VTI1A-209ENST00000496445 ABCC10Q5T3U5 1492 aa24.41■■□□□ 1.5
VTI1A-209ENST00000496445 KIAA0556O60303 1618 aa24.4■■□□□ 1.5
VTI1A-209ENST00000496445 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
VTI1A-209ENST00000496445 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
VTI1A-209ENST00000496445 ABCC2Q92887 1545 aa24.34■■□□□ 1.49
VTI1A-209ENST00000496445 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
VTI1A-209ENST00000496445 UHRF1BP1LA0JNW5 1464 aa24.32■■□□□ 1.48
VTI1A-209ENST00000496445 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
VTI1A-209ENST00000496445 UACAQ9BZF9 1416 aa24.28■■□□□ 1.48
VTI1A-209ENST00000496445 TSPOAP1O95153 1857 aa24.24■■□□□ 1.47
VTI1A-209ENST00000496445 ZCCHC11Q5TAX3 1644 aaKnown RBP24.23■■□□□ 1.47
VTI1A-209ENST00000496445 KDM5BQ9UGL1 1544 aa24.21■■□□□ 1.47
VTI1A-209ENST00000496445 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
VTI1A-209ENST00000496445 GOLGA3Q08378 1498 aa24.2■■□□□ 1.47
VTI1A-209ENST00000496445 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
VTI1A-209ENST00000496445 GLI2P10070 1586 aa24.17■■□□□ 1.46
VTI1A-209ENST00000496445 PPRC1Q5VV67 1664 aaKnown RBP24.16■■□□□ 1.46
VTI1A-209ENST00000496445 ABCA8O94911 1581 aa24.15■■□□□ 1.46
VTI1A-209ENST00000496445 EEA1Q15075 1411 aa24.14■■□□□ 1.45
VTI1A-209ENST00000496445 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
VTI1A-209ENST00000496445 KDM6BO15054 1643 aa24.12■■□□□ 1.45
VTI1A-209ENST00000496445 SAMD9Q5K651 1589 aa24.11■■□□□ 1.45
VTI1A-209ENST00000496445 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
VTI1A-209ENST00000496445 MAP3K4Q9Y6R4 1608 aa24.08■■□□□ 1.45
VTI1A-209ENST00000496445 KIF21BO75037 1637 aa24.03■■□□□ 1.44
VTI1A-209ENST00000496445 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
VTI1A-209ENST00000496445 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
VTI1A-209ENST00000496445 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
VTI1A-209ENST00000496445 RAPGEF6Q8TEU7 1601 aa23.94■■□□□ 1.42
VTI1A-209ENST00000496445 CFAP43Q8NDM7 1665 aa23.93■■□□□ 1.42
VTI1A-209ENST00000496445 TEX14Q8IWB6 1497 aa23.89■■□□□ 1.42
VTI1A-209ENST00000496445 ATP10BO94823 1461 aa23.88■■□□□ 1.41
VTI1A-209ENST00000496445 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
VTI1A-209ENST00000496445 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
VTI1A-209ENST00000496445 EFCAB5A4FU69 1503 aa23.86■■□□□ 1.41
VTI1A-209ENST00000496445 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
VTI1A-209ENST00000496445 NUP153P49790 1475 aaKnown RBP23.82■■□□□ 1.4
VTI1A-209ENST00000496445 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
VTI1A-209ENST00000496445 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
VTI1A-209ENST00000496445 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
VTI1A-209ENST00000496445 KCNH8Q96L42 1107 aa23.79■■□□□ 1.4
VTI1A-209ENST00000496445 ABCA9Q8IUA7 1624 aa23.79■■□□□ 1.4
VTI1A-209ENST00000496445 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
VTI1A-209ENST00000496445 KDM4FA0A1W2PPD8 638 aa23.7■■□□□ 1.38
VTI1A-209ENST00000496445 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
VTI1A-209ENST00000496445 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
VTI1A-209ENST00000496445 ARAP3Q8WWN8 1544 aa23.64■■□□□ 1.37
VTI1A-209ENST00000496445 ADGRL1O94910 1474 aa23.63■■□□□ 1.37
VTI1A-209ENST00000496445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
VTI1A-209ENST00000496445 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
VTI1A-209ENST00000496445 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
VTI1A-209ENST00000496445 HECW1Q76N89 1606 aa23.6■■□□□ 1.37
VTI1A-209ENST00000496445 TTC37Q6PGP7 1564 aa23.58■■□□□ 1.37
VTI1A-209ENST00000496445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.58■■□□□ 1.36
VTI1A-209ENST00000496445 NEO1Q92859 1461 aa23.57■■□□□ 1.36
VTI1A-209ENST00000496445 FMN1Q68DA7 1419 aa23.57■■□□□ 1.36
VTI1A-209ENST00000496445 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
VTI1A-209ENST00000496445 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
VTI1A-209ENST00000496445 PHLDB1Q86UU1 1377 aa23.53■■□□□ 1.36
VTI1A-209ENST00000496445 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
VTI1A-209ENST00000496445 CFAP74Q9C0B2 1584 aa23.5■■□□□ 1.35
VTI1A-209ENST00000496445 RICTORQ6R327 1708 aa23.47■■□□□ 1.35
VTI1A-209ENST00000496445 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
VTI1A-209ENST00000496445 KIF14Q15058 1648 aa23.44■■□□□ 1.34
VTI1A-209ENST00000496445 FANCAO15360 1455 aa23.44■■□□□ 1.34
VTI1A-209ENST00000496445 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
VTI1A-209ENST00000496445 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
VTI1A-209ENST00000496445 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
VTI1A-209ENST00000496445 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
VTI1A-209ENST00000496445 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
VTI1A-209ENST00000496445 ARHGEF40Q8TER5 1519 aa23.39■■□□□ 1.34
VTI1A-209ENST00000496445 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
VTI1A-209ENST00000496445 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
VTI1A-209ENST00000496445 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
VTI1A-209ENST00000496445 PLCH2O75038 1416 aa23.36■■□□□ 1.33
VTI1A-209ENST00000496445 ZMYM4Q5VZL5 1548 aa23.36■■□□□ 1.33
VTI1A-209ENST00000496445 ADAMTSL3P82987 1691 aa23.34■■□□□ 1.33
VTI1A-209ENST00000496445 CLIP1P30622 1438 aa23.33■■□□□ 1.33
VTI1A-209ENST00000496445 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.33
VTI1A-209ENST00000496445 FYCO1Q9BQS8 1478 aa23.32■■□□□ 1.32
VTI1A-209ENST00000496445 BCORL1Q5H9F3 1711 aa23.32■■□□□ 1.32
VTI1A-209ENST00000496445 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms