RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 IGF1RP08069 1367 aa22.85■■□□□ 1.25
USF1-207ENST00000496363 CUL7Q14999 1698 aa22.84■■□□□ 1.25
USF1-207ENST00000496363 KIF13AQ9H1H9 1805 aa22.81■■□□□ 1.24
USF1-207ENST00000496363 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
USF1-207ENST00000496363 ADCY10Q96PN6 1610 aa22.73■■□□□ 1.23
USF1-207ENST00000496363 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
USF1-207ENST00000496363 MAPKBP1O60336 1514 aa22.65■■□□□ 1.22
USF1-207ENST00000496363 ABCC10Q5T3U5 1492 aa22.63■■□□□ 1.21
USF1-207ENST00000496363 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
USF1-207ENST00000496363 DIP2BQ9P265 1576 aa22.61■■□□□ 1.21
USF1-207ENST00000496363 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
USF1-207ENST00000496363 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
USF1-207ENST00000496363 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
USF1-207ENST00000496363 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
USF1-207ENST00000496363 PTPRGP23470 1445 aa22.56■■□□□ 1.2
USF1-207ENST00000496363 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
USF1-207ENST00000496363 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
USF1-207ENST00000496363 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
USF1-207ENST00000496363 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
USF1-207ENST00000496363 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
USF1-207ENST00000496363 ABCC2Q92887 1545 aa22.46■■□□□ 1.19
USF1-207ENST00000496363 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
USF1-207ENST00000496363 KDM6BO15054 1643 aa22.41■■□□□ 1.18
USF1-207ENST00000496363 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
USF1-207ENST00000496363 KIAA0556O60303 1618 aa22.4■■□□□ 1.18
USF1-207ENST00000496363 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
USF1-207ENST00000496363 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.17
USF1-207ENST00000496363 ASXL2Q76L83 1435 aa22.39■■□□□ 1.17
USF1-207ENST00000496363 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
USF1-207ENST00000496363 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
USF1-207ENST00000496363 ZCCHC11Q5TAX3 1644 aaKnown RBP22.33■■□□□ 1.17
USF1-207ENST00000496363 GLI2P10070 1586 aa22.33■■□□□ 1.16
USF1-207ENST00000496363 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
USF1-207ENST00000496363 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
USF1-207ENST00000496363 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
USF1-207ENST00000496363 MAP3K4Q9Y6R4 1608 aa22.24■■□□□ 1.15
USF1-207ENST00000496363 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
USF1-207ENST00000496363 ABCA8O94911 1581 aa22.19■■□□□ 1.14
USF1-207ENST00000496363 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
USF1-207ENST00000496363 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
USF1-207ENST00000496363 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
USF1-207ENST00000496363 TEX14Q8IWB6 1497 aa22.11■■□□□ 1.13
USF1-207ENST00000496363 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
USF1-207ENST00000496363 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
USF1-207ENST00000496363 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
USF1-207ENST00000496363 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
USF1-207ENST00000496363 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
USF1-207ENST00000496363 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
USF1-207ENST00000496363 CD109Q6YHK3 1445 aa22.02■■□□□ 1.12
USF1-207ENST00000496363 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
USF1-207ENST00000496363 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
USF1-207ENST00000496363 ATP10BO94823 1461 aa21.99■■□□□ 1.11
USF1-207ENST00000496363 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
USF1-207ENST00000496363 EEA1Q15075 1411 aa21.95■■□□□ 1.1
USF1-207ENST00000496363 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
USF1-207ENST00000496363 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
USF1-207ENST00000496363 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.1
USF1-207ENST00000496363 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.09
USF1-207ENST00000496363 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
USF1-207ENST00000496363 KIF21BO75037 1637 aa21.86■■□□□ 1.09
USF1-207ENST00000496363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
USF1-207ENST00000496363 HNRNPUL2Q1KMD3 747 aaKnown RBP21.83■■□□□ 1.09
USF1-207ENST00000496363 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
USF1-207ENST00000496363 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
USF1-207ENST00000496363 EHMT2Q96KQ7 1210 aa21.75■■□□□ 1.07
USF1-207ENST00000496363 NEO1Q92859 1461 aa21.74■■□□□ 1.07
USF1-207ENST00000496363 FRMPD1Q5SYB0 1578 aa21.73■■□□□ 1.07
USF1-207ENST00000496363 HECW2Q9P2P5 1572 aa21.73■■□□□ 1.07
USF1-207ENST00000496363 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
USF1-207ENST00000496363 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
USF1-207ENST00000496363 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
USF1-207ENST00000496363 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
USF1-207ENST00000496363 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
USF1-207ENST00000496363 TTC37Q6PGP7 1564 aa21.68■■□□□ 1.06
USF1-207ENST00000496363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.67■■□□□ 1.06
USF1-207ENST00000496363 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
USF1-207ENST00000496363 RICTORQ6R327 1708 aa21.63■■□□□ 1.05
USF1-207ENST00000496363 ADAMTSL3P82987 1691 aa21.63■■□□□ 1.05
USF1-207ENST00000496363 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
USF1-207ENST00000496363 FANCAO15360 1455 aa21.61■■□□□ 1.05
USF1-207ENST00000496363 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
USF1-207ENST00000496363 AKNAQ7Z591 1439 aa21.61■■□□□ 1.05
USF1-207ENST00000496363 DENND4BO75064 1496 aaPredicted RBP21.59■■□□□ 1.05
USF1-207ENST00000496363 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
USF1-207ENST00000496363 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
USF1-207ENST00000496363 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
USF1-207ENST00000496363 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
USF1-207ENST00000496363 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
USF1-207ENST00000496363 MADDQ8WXG6 1647 aa21.55■■□□□ 1.04
USF1-207ENST00000496363 PTPRMP28827 1452 aa21.55■■□□□ 1.04
USF1-207ENST00000496363 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
USF1-207ENST00000496363 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
USF1-207ENST00000496363 ZMYM4Q5VZL5 1548 aa21.52■■□□□ 1.04
USF1-207ENST00000496363 KIF14Q15058 1648 aa21.51■■□□□ 1.03
USF1-207ENST00000496363 SIGLEC1Q9BZZ2 1709 aa21.51■■□□□ 1.03
USF1-207ENST00000496363 MYO5CQ9NQX4 1742 aa21.51■■□□□ 1.03
USF1-207ENST00000496363 ILDR1Q86SU0 546 aaPredicted RBP21.5■■□□□ 1.03
USF1-207ENST00000496363 PLCH2O75038 1416 aa21.49■■□□□ 1.03
USF1-207ENST00000496363 ZFYVE16Q7Z3T8 1539 aa21.49■■□□□ 1.03
USF1-207ENST00000496363 YEATS2Q9ULM3 1422 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms