RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 KIF27Q86VH2 1401 aa18.99■□□□□ 0.63
RNF220-217ENST00000496262 IGF1RP08069 1367 aa18.96■□□□□ 0.63
RNF220-217ENST00000496262 CUL7Q14999 1698 aa18.92■□□□□ 0.62
RNF220-217ENST00000496262 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
RNF220-217ENST00000496262 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
RNF220-217ENST00000496262 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
RNF220-217ENST00000496262 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
RNF220-217ENST00000496262 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
RNF220-217ENST00000496262 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
RNF220-217ENST00000496262 KIF13AQ9H1H9 1805 aa18.81■□□□□ 0.6
RNF220-217ENST00000496262 FAM69CQ0P6D2 419 aa18.78■□□□□ 0.6
RNF220-217ENST00000496262 MAPKBP1O60336 1514 aa18.75■□□□□ 0.59
RNF220-217ENST00000496262 ABCC10Q5T3U5 1492 aa18.75■□□□□ 0.59
RNF220-217ENST00000496262 PTPRGP23470 1445 aa18.74■□□□□ 0.59
RNF220-217ENST00000496262 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
RNF220-217ENST00000496262 CARMIL2Q6F5E8 1435 aa18.73■□□□□ 0.59
RNF220-217ENST00000496262 DIP2BQ9P265 1576 aa18.72■□□□□ 0.59
RNF220-217ENST00000496262 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
RNF220-217ENST00000496262 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
RNF220-217ENST00000496262 DISP1Q96F81 1524 aa18.64■□□□□ 0.57
RNF220-217ENST00000496262 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
RNF220-217ENST00000496262 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
RNF220-217ENST00000496262 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
RNF220-217ENST00000496262 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
RNF220-217ENST00000496262 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
RNF220-217ENST00000496262 KDM6BO15054 1643 aa18.57■□□□□ 0.56
RNF220-217ENST00000496262 KIAA0556O60303 1618 aa18.57■□□□□ 0.56
RNF220-217ENST00000496262 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
RNF220-217ENST00000496262 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
RNF220-217ENST00000496262 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
RNF220-217ENST00000496262 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
RNF220-217ENST00000496262 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
RNF220-217ENST00000496262 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
RNF220-217ENST00000496262 GLI2P10070 1586 aa18.47■□□□□ 0.55
RNF220-217ENST00000496262 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
RNF220-217ENST00000496262 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
RNF220-217ENST00000496262 PPRC1Q5VV67 1664 aaKnown RBP18.44■□□□□ 0.54
RNF220-217ENST00000496262 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
RNF220-217ENST00000496262 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
RNF220-217ENST00000496262 P3H3Q8IVL6 736 aa18.39■□□□□ 0.53
RNF220-217ENST00000496262 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
RNF220-217ENST00000496262 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
RNF220-217ENST00000496262 ABCA8O94911 1581 aa18.37■□□□□ 0.53
RNF220-217ENST00000496262 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
RNF220-217ENST00000496262 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
RNF220-217ENST00000496262 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
RNF220-217ENST00000496262 COL17A1Q9UMD9 1497 aaPredicted RBP18.34■□□□□ 0.53
RNF220-217ENST00000496262 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
RNF220-217ENST00000496262 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
RNF220-217ENST00000496262 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
RNF220-217ENST00000496262 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
RNF220-217ENST00000496262 SAMD9Q5K651 1589 aa18.25■□□□□ 0.51
RNF220-217ENST00000496262 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
RNF220-217ENST00000496262 EEA1Q15075 1411 aa18.24■□□□□ 0.51
RNF220-217ENST00000496262 ATP10BO94823 1461 aa18.23■□□□□ 0.51
RNF220-217ENST00000496262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
RNF220-217ENST00000496262 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
RNF220-217ENST00000496262 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
RNF220-217ENST00000496262 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
RNF220-217ENST00000496262 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
RNF220-217ENST00000496262 FHOD3Q2V2M9 1422 aa18.2■□□□□ 0.5
RNF220-217ENST00000496262 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.5
RNF220-217ENST00000496262 KIF21BO75037 1637 aa18.12■□□□□ 0.49
RNF220-217ENST00000496262 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
RNF220-217ENST00000496262 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
RNF220-217ENST00000496262 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.48
RNF220-217ENST00000496262 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
RNF220-217ENST00000496262 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
RNF220-217ENST00000496262 PLEKHD1A6NEE1 506 aa18.04■□□□□ 0.48
RNF220-217ENST00000496262 NEO1Q92859 1461 aa18.03■□□□□ 0.48
RNF220-217ENST00000496262 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
RNF220-217ENST00000496262 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
RNF220-217ENST00000496262 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
RNF220-217ENST00000496262 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
RNF220-217ENST00000496262 FRMPD1Q5SYB0 1578 aa17.97■□□□□ 0.47
RNF220-217ENST00000496262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
RNF220-217ENST00000496262 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
RNF220-217ENST00000496262 FANCAO15360 1455 aa17.95■□□□□ 0.46
RNF220-217ENST00000496262 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
RNF220-217ENST00000496262 ARHGAP35Q9NRY4 1499 aa17.95■□□□□ 0.46
RNF220-217ENST00000496262 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
RNF220-217ENST00000496262 FMN1Q68DA7 1419 aa17.93■□□□□ 0.46
RNF220-217ENST00000496262 DENND4BO75064 1496 aaPredicted RBP17.93■□□□□ 0.46
RNF220-217ENST00000496262 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
RNF220-217ENST00000496262 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
RNF220-217ENST00000496262 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
RNF220-217ENST00000496262 PTPRMP28827 1452 aa17.88■□□□□ 0.45
RNF220-217ENST00000496262 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
RNF220-217ENST00000496262 RICTORQ6R327 1708 aa17.87■□□□□ 0.45
RNF220-217ENST00000496262 BCORL1Q5H9F3 1711 aa17.85■□□□□ 0.45
RNF220-217ENST00000496262 MADDQ8WXG6 1647 aa17.85■□□□□ 0.45
RNF220-217ENST00000496262 PLCH2O75038 1416 aa17.84■□□□□ 0.45
RNF220-217ENST00000496262 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
RNF220-217ENST00000496262 KIF14Q15058 1648 aa17.83■□□□□ 0.45
RNF220-217ENST00000496262 YEATS2Q9ULM3 1422 aa17.83■□□□□ 0.45
RNF220-217ENST00000496262 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
RNF220-217ENST00000496262 ZFYVE16Q7Z3T8 1539 aa17.82■□□□□ 0.44
RNF220-217ENST00000496262 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
RNF220-217ENST00000496262 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
RNF220-217ENST00000496262 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms