RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 PRG4Q92954 1404 aaPredicted RBP35.21■■■■□ 3.23
COL9A2-211ENST00000496215 JPH4Q96JJ6 628 aa35.18■■■■□ 3.22
COL9A2-211ENST00000496215 KIAA0586Q9BVV6 1533 aa35.16■■■■□ 3.22
COL9A2-211ENST00000496215 RAPGEF2Q9Y4G8 1499 aa35■■■■□ 3.19
COL9A2-211ENST00000496215 TRHP20396 242 aaPredicted RBP34.98■■■■□ 3.19
COL9A2-211ENST00000496215 IQGAP2Q13576 1575 aa34.95■■■■□ 3.18
COL9A2-211ENST00000496215 CTTNBP2Q8WZ74 1663 aa34.84■■■■□ 3.17
COL9A2-211ENST00000496215 ADCY10Q96PN6 1610 aa34.84■■■■□ 3.17
COL9A2-211ENST00000496215 PRXQ9BXM0 1461 aa34.84■■■■□ 3.17
COL9A2-211ENST00000496215 DISP1Q96F81 1524 aa34.79■■■■□ 3.16
COL9A2-211ENST00000496215 UGGT2Q9NYU1 1516 aa34.76■■■■□ 3.15
COL9A2-211ENST00000496215 EEA1Q15075 1411 aa34.73■■■■□ 3.15
COL9A2-211ENST00000496215 CARMIL2Q6F5E8 1435 aa34.72■■■■□ 3.15
COL9A2-211ENST00000496215 TNIKQ9UKE5 1360 aa34.69■■■■□ 3.14
COL9A2-211ENST00000496215 PTPRGP23470 1445 aa34.69■■■■□ 3.14
COL9A2-211ENST00000496215 KIAA0556O60303 1618 aa34.66■■■■□ 3.14
COL9A2-211ENST00000496215 KIF13AQ9H1H9 1805 aa34.66■■■■□ 3.14
COL9A2-211ENST00000496215 TTBK1Q5TCY1 1321 aaPredicted RBP34.62■■■■□ 3.13
COL9A2-211ENST00000496215 MAPKBP1O60336 1514 aa34.62■■■■□ 3.13
COL9A2-211ENST00000496215 CSRNP3Q8WYN3 585 aa34.6■■■■□ 3.13
COL9A2-211ENST00000496215 CHIC1Q5VXU3 224 aa34.57■■■■□ 3.12
COL9A2-211ENST00000496215 NPM1P06748 294 aaKnown RBP eCLIP34.5■■■■□ 3.11
COL9A2-211ENST00000496215 UHRF1BP1LA0JNW5 1464 aa34.5■■■■□ 3.11
COL9A2-211ENST00000496215 ABCC10Q5T3U5 1492 aa34.5■■■■□ 3.11
COL9A2-211ENST00000496215 ABCC2Q92887 1545 aa34.5■■■■□ 3.11
COL9A2-211ENST00000496215 DIP2BQ9P265 1576 aa34.49■■■■□ 3.11
COL9A2-211ENST00000496215 GOLGA3Q08378 1498 aa34.49■■■■□ 3.11
COL9A2-211ENST00000496215 UACAQ9BZF9 1416 aa34.47■■■■□ 3.11
COL9A2-211ENST00000496215 KIF21BO75037 1637 aa34.47■■■■□ 3.11
COL9A2-211ENST00000496215 FAM9AQ8IZU1 332 aaPredicted RBP34.44■■■■□ 3.1
COL9A2-211ENST00000496215 FAM69CQ0P6D2 419 aa34.36■■■■□ 3.09
COL9A2-211ENST00000496215 KDM5BQ9UGL1 1544 aa34.35■■■■□ 3.09
COL9A2-211ENST00000496215 PLB1Q6P1J6 1458 aa34.34■■■■□ 3.09
COL9A2-211ENST00000496215 ZCCHC11Q5TAX3 1644 aaKnown RBP34.33■■■■□ 3.09
COL9A2-211ENST00000496215 SAMD9Q5K651 1589 aa34.32■■■■□ 3.09
COL9A2-211ENST00000496215 ABCA8O94911 1581 aa34.32■■■■□ 3.08
COL9A2-211ENST00000496215 ASXL2Q76L83 1435 aa34.31■■■■□ 3.08
COL9A2-211ENST00000496215 P3H3Q8IVL6 736 aa34.21■■■■□ 3.07
COL9A2-211ENST00000496215 TSPOAP1O95153 1857 aa34.2■■■■□ 3.07
COL9A2-211ENST00000496215 GLI2P10070 1586 aa34.18■■■■□ 3.06
COL9A2-211ENST00000496215 PPRC1Q5VV67 1664 aaKnown RBP34.14■■■■□ 3.06
COL9A2-211ENST00000496215 EPRSP07814 1512 aaKnown RBP34.13■■■■□ 3.05
COL9A2-211ENST00000496215 EFCAB5A4FU69 1503 aa34.12■■■■□ 3.05
COL9A2-211ENST00000496215 RANGAP1P46060 587 aaPredicted RBP34.08■■■■□ 3.05
COL9A2-211ENST00000496215 WDR7Q9Y4E6 1490 aa34.07■■■■□ 3.05
COL9A2-211ENST00000496215 FHOD3Q2V2M9 1422 aa34.06■■■■□ 3.04
COL9A2-211ENST00000496215 MAP3K4Q9Y6R4 1608 aa34.06■■■■□ 3.04
COL9A2-211ENST00000496215 EHMT2Q96KQ7 1210 aa34.05■■■■□ 3.04
COL9A2-211ENST00000496215 RAPGEF6Q8TEU7 1601 aa34.03■■■■□ 3.04
COL9A2-211ENST00000496215 UBTFP17480 764 aaKnown RBP33.99■■■■□ 3.03
COL9A2-211ENST00000496215 KDM6BO15054 1643 aa33.99■■■■□ 3.03
COL9A2-211ENST00000496215 ATP10BO94823 1461 aa33.99■■■■□ 3.03
COL9A2-211ENST00000496215 ARID3CA6NKF2 412 aa33.96■■■■□ 3.03
COL9A2-211ENST00000496215 NUP153P49790 1475 aaKnown RBP33.92■■■■□ 3.02
COL9A2-211ENST00000496215 CFAP43Q8NDM7 1665 aa33.85■■■■□ 3.01
COL9A2-211ENST00000496215 ARHGAP35Q9NRY4 1499 aa33.84■■■■□ 3.01
COL9A2-211ENST00000496215 KCNH8Q96L42 1107 aa33.83■■■■□ 3.01
COL9A2-211ENST00000496215 COL17A1Q9UMD9 1497 aaPredicted RBP33.81■■■■□ 3
COL9A2-211ENST00000496215 TEX14Q8IWB6 1497 aa33.78■■■■□ 3
COL9A2-211ENST00000496215 CD109Q6YHK3 1445 aa33.76■■■□□ 2.99
COL9A2-211ENST00000496215 MAGI3Q5TCQ9 1506 aa33.75■■■□□ 2.99
COL9A2-211ENST00000496215 FMN1Q68DA7 1419 aa33.73■■■□□ 2.99
COL9A2-211ENST00000496215 ABCA9Q8IUA7 1624 aa33.72■■■□□ 2.99
COL9A2-211ENST00000496215 HECW1Q76N89 1606 aa33.7■■■□□ 2.99
COL9A2-211ENST00000496215 CDK13Q14004 1512 aaKnown RBP33.67■■■□□ 2.98
COL9A2-211ENST00000496215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.65■■■□□ 2.98
COL9A2-211ENST00000496215 HNRNPUL2Q1KMD3 747 aaKnown RBP33.65■■■□□ 2.98
COL9A2-211ENST00000496215 AEBP2Q6ZN18 517 aaPredicted RBP33.58■■■□□ 2.97
COL9A2-211ENST00000496215 LRRIQ1Q96JM4 1722 aa33.57■■■□□ 2.96
COL9A2-211ENST00000496215 PCF11O94913 1555 aaKnown RBP33.53■■■□□ 2.96
COL9A2-211ENST00000496215 CLIP1P30622 1438 aa33.53■■■□□ 2.96
COL9A2-211ENST00000496215 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.95
COL9A2-211ENST00000496215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.5■■■□□ 2.95
COL9A2-211ENST00000496215 PLEKHD1A6NEE1 506 aa33.5■■■□□ 2.95
COL9A2-211ENST00000496215 ARAP3Q8WWN8 1544 aa33.48■■■□□ 2.95
COL9A2-211ENST00000496215 ATP1B4Q9UN42 357 aaPredicted RBP33.46■■■□□ 2.95
COL9A2-211ENST00000496215 CASKIN1Q8WXD9 1431 aa33.42■■■□□ 2.94
COL9A2-211ENST00000496215 NEO1Q92859 1461 aa33.41■■■□□ 2.94
COL9A2-211ENST00000496215 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
COL9A2-211ENST00000496215 KDM4FA0A1W2PPD8 638 aa33.4■■■□□ 2.94
COL9A2-211ENST00000496215 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
COL9A2-211ENST00000496215 FRMPD1Q5SYB0 1578 aa33.37■■■□□ 2.93
COL9A2-211ENST00000496215 KIF14Q15058 1648 aa33.36■■■□□ 2.93
COL9A2-211ENST00000496215 CFAP74Q9C0B2 1584 aa33.35■■■□□ 2.93
COL9A2-211ENST00000496215 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
COL9A2-211ENST00000496215 CEP162Q5TB80 1403 aa33.34■■■□□ 2.93
COL9A2-211ENST00000496215 CDK11AQ9UQ88 783 aaPredicted RBP33.31■■■□□ 2.92
COL9A2-211ENST00000496215 FANCAO15360 1455 aa33.3■■■□□ 2.92
COL9A2-211ENST00000496215 TROQ12816 1431 aaPredicted RBP33.29■■■□□ 2.92
COL9A2-211ENST00000496215 ADGRL1O94910 1474 aa33.29■■■□□ 2.92
COL9A2-211ENST00000496215 MYO5CQ9NQX4 1742 aa33.28■■■□□ 2.92
COL9A2-211ENST00000496215 RAPGEF3O95398 923 aa33.27■■■□□ 2.92
COL9A2-211ENST00000496215 AKNAQ7Z591 1439 aa33.26■■■□□ 2.91
COL9A2-211ENST00000496215 RICTORQ6R327 1708 aa33.25■■■□□ 2.91
COL9A2-211ENST00000496215 PLCH2O75038 1416 aa33.23■■■□□ 2.91
COL9A2-211ENST00000496215 DENND4BO75064 1496 aaPredicted RBP33.17■■■□□ 2.9
COL9A2-211ENST00000496215 LOC105371045A0A1W2PR82 267 aa33.13■■■□□ 2.89
COL9A2-211ENST00000496215 CDC42BPBQ9Y5S2 1711 aa33.1■■■□□ 2.89
COL9A2-211ENST00000496215 ZMYM4Q5VZL5 1548 aa33.09■■■□□ 2.89
COL9A2-211ENST00000496215 PREX2Q70Z35 1606 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms