RNA–Protein interactions for RNA: ENST00000496120.6

PBX1-210, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-210ENST00000496120 SHROOM2Q13796 1616 aa35.34■■■■□ 3.25
PBX1-210ENST00000496120 CSRNP3Q8WYN3 585 aa35.26■■■■□ 3.23
PBX1-210ENST00000496120 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
PBX1-210ENST00000496120 KIF21BO75037 1637 aa35.15■■■■□ 3.22
PBX1-210ENST00000496120 PRG4Q92954 1404 aaPredicted RBP35.08■■■■□ 3.21
PBX1-210ENST00000496120 JPH4Q96JJ6 628 aa35.03■■■■□ 3.2
PBX1-210ENST00000496120 GOLGA3Q08378 1498 aa35.01■■■■□ 3.2
PBX1-210ENST00000496120 EHMT2Q96KQ7 1210 aa34.99■■■■□ 3.19
PBX1-210ENST00000496120 PRXQ9BXM0 1461 aa34.96■■■■□ 3.19
PBX1-210ENST00000496120 IGF1RP08069 1367 aa34.93■■■■□ 3.18
PBX1-210ENST00000496120 CUL7Q14999 1698 aa34.91■■■■□ 3.18
PBX1-210ENST00000496120 RAPGEF2Q9Y4G8 1499 aa34.88■■■■□ 3.18
PBX1-210ENST00000496120 KIF13AQ9H1H9 1805 aa34.88■■■■□ 3.17
PBX1-210ENST00000496120 KIAA0586Q9BVV6 1533 aa34.85■■■■□ 3.17
PBX1-210ENST00000496120 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
PBX1-210ENST00000496120 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
PBX1-210ENST00000496120 UBTFP17480 764 aaKnown RBP34.74■■■■□ 3.15
PBX1-210ENST00000496120 CARMIL1Q5VZK9 1371 aa34.73■■■■□ 3.15
PBX1-210ENST00000496120 MAPKBP1O60336 1514 aa34.71■■■■□ 3.15
PBX1-210ENST00000496120 ABCC10Q5T3U5 1492 aa34.67■■■■□ 3.14
PBX1-210ENST00000496120 CEP162Q5TB80 1403 aa34.64■■■■□ 3.14
PBX1-210ENST00000496120 NPM1P06748 294 aaKnown RBP eCLIP34.63■■■■□ 3.13
PBX1-210ENST00000496120 DIP2BQ9P265 1576 aa34.61■■■■□ 3.13
PBX1-210ENST00000496120 AEBP2Q6ZN18 517 aaPredicted RBP34.6■■■■□ 3.13
PBX1-210ENST00000496120 FAM69CQ0P6D2 419 aa34.57■■■■□ 3.12
PBX1-210ENST00000496120 IQGAP2Q13576 1575 aa34.52■■■■□ 3.12
PBX1-210ENST00000496120 PTPRGP23470 1445 aa34.51■■■■□ 3.11
PBX1-210ENST00000496120 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
PBX1-210ENST00000496120 CTTNBP2Q8WZ74 1663 aa34.42■■■■□ 3.1
PBX1-210ENST00000496120 CLIP1P30622 1438 aa34.41■■■■□ 3.1
PBX1-210ENST00000496120 ABCC2Q92887 1545 aa34.38■■■■□ 3.09
PBX1-210ENST00000496120 DISP1Q96F81 1524 aa34.38■■■■□ 3.09
PBX1-210ENST00000496120 TTBK1Q5TCY1 1321 aaPredicted RBP34.36■■■■□ 3.09
PBX1-210ENST00000496120 TSPOAP1O95153 1857 aa34.34■■■■□ 3.09
PBX1-210ENST00000496120 UHRF1BP1LA0JNW5 1464 aa34.33■■■■□ 3.09
PBX1-210ENST00000496120 UGGT2Q9NYU1 1516 aa34.32■■■■□ 3.08
PBX1-210ENST00000496120 KDM6BO15054 1643 aa34.3■■■■□ 3.08
PBX1-210ENST00000496120 UACAQ9BZF9 1416 aa34.26■■■■□ 3.08
PBX1-210ENST00000496120 ASXL2Q76L83 1435 aa34.25■■■■□ 3.07
PBX1-210ENST00000496120 PLB1Q6P1J6 1458 aa34.23■■■■□ 3.07
PBX1-210ENST00000496120 KIAA0556O60303 1618 aa34.23■■■■□ 3.07
PBX1-210ENST00000496120 GLI2P10070 1586 aa34.21■■■■□ 3.07
PBX1-210ENST00000496120 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
PBX1-210ENST00000496120 ARHGAP35Q9NRY4 1499 aa34.17■■■■□ 3.06
PBX1-210ENST00000496120 KDM5BQ9UGL1 1544 aa34.17■■■■□ 3.06
PBX1-210ENST00000496120 PPRC1Q5VV67 1664 aaKnown RBP34.16■■■■□ 3.06
PBX1-210ENST00000496120 ZCCHC11Q5TAX3 1644 aaKnown RBP34.1■■■■□ 3.05
PBX1-210ENST00000496120 VPS8Q8N3P4 1428 aa34.1■■■■□ 3.05
PBX1-210ENST00000496120 EFCAB5A4FU69 1503 aa34.08■■■■□ 3.05
PBX1-210ENST00000496120 EPRSP07814 1512 aaKnown RBP34.06■■■■□ 3.04
PBX1-210ENST00000496120 MAP3K4Q9Y6R4 1608 aa34.03■■■■□ 3.04
PBX1-210ENST00000496120 SAMD9Q5K651 1589 aa34.02■■■■□ 3.04
PBX1-210ENST00000496120 KDM4FA0A1W2PPD8 638 aa33.96■■■■□ 3.03
PBX1-210ENST00000496120 WDR7Q9Y4E6 1490 aa33.92■■■■□ 3.02
PBX1-210ENST00000496120 ABCA8O94911 1581 aa33.92■■■■□ 3.02
PBX1-210ENST00000496120 COL17A1Q9UMD9 1497 aaPredicted RBP33.89■■■■□ 3.02
PBX1-210ENST00000496120 TEX14Q8IWB6 1497 aa33.88■■■■□ 3.01
PBX1-210ENST00000496120 FHOD3Q2V2M9 1422 aa33.84■■■■□ 3.01
PBX1-210ENST00000496120 P3H3Q8IVL6 736 aa33.78■■■■□ 3
PBX1-210ENST00000496120 CFAP43Q8NDM7 1665 aa33.76■■■□□ 2.99
PBX1-210ENST00000496120 PCF11O94913 1555 aaKnown RBP33.73■■■□□ 2.99
PBX1-210ENST00000496120 MAGI3Q5TCQ9 1506 aa33.71■■■□□ 2.99
PBX1-210ENST00000496120 FMN1Q68DA7 1419 aa33.71■■■□□ 2.99
PBX1-210ENST00000496120 CD109Q6YHK3 1445 aa33.69■■■□□ 2.98
PBX1-210ENST00000496120 ADGRL1O94910 1474 aa33.69■■■□□ 2.98
PBX1-210ENST00000496120 PPARGC1BQ86YN6 1023 aaKnown RBP33.67■■■□□ 2.98
PBX1-210ENST00000496120 KCNH8Q96L42 1107 aa33.66■■■□□ 2.98
PBX1-210ENST00000496120 FYCO1Q9BQS8 1478 aa33.65■■■□□ 2.98
PBX1-210ENST00000496120 APLP2Q06481 763 aa33.63■■■□□ 2.97
PBX1-210ENST00000496120 CASKIN1Q8WXD9 1431 aa33.63■■■□□ 2.97
PBX1-210ENST00000496120 ATP10BO94823 1461 aa33.61■■■□□ 2.97
PBX1-210ENST00000496120 TRIM26Q12899 539 aaPredicted RBP33.6■■■□□ 2.97
PBX1-210ENST00000496120 MAP3K1Q13233 1512 aa33.6■■■□□ 2.97
PBX1-210ENST00000496120 TIAM1Q13009 1591 aa33.57■■■□□ 2.96
PBX1-210ENST00000496120 ARID3CA6NKF2 412 aa33.53■■■□□ 2.96
PBX1-210ENST00000496120 RAPGEF6Q8TEU7 1601 aa33.53■■■□□ 2.96
PBX1-210ENST00000496120 LRRIQ1Q96JM4 1722 aa33.51■■■□□ 2.95
PBX1-210ENST00000496120 ABCA9Q8IUA7 1624 aa33.49■■■□□ 2.95
PBX1-210ENST00000496120 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
PBX1-210ENST00000496120 HECW1Q76N89 1606 aa33.46■■■□□ 2.95
PBX1-210ENST00000496120 ARAP3Q8WWN8 1544 aa33.45■■■□□ 2.95
PBX1-210ENST00000496120 NUP153P49790 1475 aaKnown RBP33.41■■■□□ 2.94
PBX1-210ENST00000496120 KANK4Q5T7N3 995 aaPredicted RBP33.4■■■□□ 2.94
PBX1-210ENST00000496120 LRRC9Q6ZRR7 1453 aa33.36■■■□□ 2.93
PBX1-210ENST00000496120 ATP1B4Q9UN42 357 aaPredicted RBP33.36■■■□□ 2.93
PBX1-210ENST00000496120 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
PBX1-210ENST00000496120 CCDC18Q5T9S5 1454 aa33.33■■■□□ 2.93
PBX1-210ENST00000496120 NEO1Q92859 1461 aa33.29■■■□□ 2.92
PBX1-210ENST00000496120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.29■■■□□ 2.92
PBX1-210ENST00000496120 HNRNPUL2Q1KMD3 747 aaKnown RBP33.29■■■□□ 2.92
PBX1-210ENST00000496120 HECW2Q9P2P5 1572 aa33.27■■■□□ 2.92
PBX1-210ENST00000496120 FRMPD1Q5SYB0 1578 aa33.2■■■□□ 2.91
PBX1-210ENST00000496120 CDK13Q14004 1512 aaKnown RBP33.2■■■□□ 2.9
PBX1-210ENST00000496120 RAPGEF3O95398 923 aa33.18■■■□□ 2.9
PBX1-210ENST00000496120 EHBP1L1Q8N3D4 1523 aa33.17■■■□□ 2.9
PBX1-210ENST00000496120 PLEKHD1A6NEE1 506 aa33.15■■■□□ 2.9
PBX1-210ENST00000496120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.89
PBX1-210ENST00000496120 ADAMTSL3P82987 1691 aa33.11■■■□□ 2.89
PBX1-210ENST00000496120 MTUS2Q5JR59 1369 aa33.11■■■□□ 2.89
PBX1-210ENST00000496120 SUPT6HQ7KZ85 1726 aaKnown RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms