RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 SPDYE2BA6NHP3 402 aa10.15□□□□□ -0.78
XPA-204ENST00000496104 SPDYE6P0CI01 402 aa10.15□□□□□ -0.78
XPA-204ENST00000496104 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
XPA-204ENST00000496104 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.78
XPA-204ENST00000496104 PDS5BQ9NTI5 1447 aa10.15□□□□□ -0.79
XPA-204ENST00000496104 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
XPA-204ENST00000496104 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
XPA-204ENST00000496104 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
XPA-204ENST00000496104 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
XPA-204ENST00000496104 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
XPA-204ENST00000496104 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
XPA-204ENST00000496104 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
XPA-204ENST00000496104 PEG3Q9GZU2 1588 aa10.01□□□□□ -0.81
XPA-204ENST00000496104 FBLN2P98095 1184 aa10□□□□□ -0.81
XPA-204ENST00000496104 CADPSQ9ULU8 1353 aa10□□□□□ -0.81
XPA-204ENST00000496104 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
XPA-204ENST00000496104 URB2Q14146 1524 aaKnown RBP9.97□□□□□ -0.81
XPA-204ENST00000496104 CEP164Q9UPV0 1460 aa9.97□□□□□ -0.81
XPA-204ENST00000496104 RSF1Q96T23 1441 aaPredicted RBP9.94□□□□□ -0.82
XPA-204ENST00000496104 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
XPA-204ENST00000496104 CHD1O14646 1710 aa9.93□□□□□ -0.82
XPA-204ENST00000496104 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
XPA-204ENST00000496104 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
XPA-204ENST00000496104 KDM4FA0A1W2PPD8 638 aa9.92□□□□□ -0.82
XPA-204ENST00000496104 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
XPA-204ENST00000496104 CD44P16070 742 aaKnown RBP9.9□□□□□ -0.82
XPA-204ENST00000496104 PRR29P0C7W0 189 aa9.89□□□□□ -0.83
XPA-204ENST00000496104 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
XPA-204ENST00000496104 EIF4G3O43432 1585 aaKnown RBP9.86□□□□□ -0.83
XPA-204ENST00000496104 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
XPA-204ENST00000496104 CLCN6P51797 869 aa9.85□□□□□ -0.83
XPA-204ENST00000496104 DCBLD2Q96PD2 775 aa9.85□□□□□ -0.83
XPA-204ENST00000496104 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
XPA-204ENST00000496104 MROH2BQ7Z745 1585 aa9.8□□□□□ -0.84
XPA-204ENST00000496104 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
XPA-204ENST00000496104 ZBTB22O15209 634 aa9.8□□□□□ -0.84
XPA-204ENST00000496104 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
XPA-204ENST00000496104 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
XPA-204ENST00000496104 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
XPA-204ENST00000496104 HECW2Q9P2P5 1572 aa9.79□□□□□ -0.84
XPA-204ENST00000496104 POTEMA6NI47 508 aa9.78□□□□□ -0.84
XPA-204ENST00000496104 CFTRP13569 1480 aa9.78□□□□□ -0.84
XPA-204ENST00000496104 ERCC6L2Q5T890 1561 aa9.77□□□□□ -0.85
XPA-204ENST00000496104 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
XPA-204ENST00000496104 ILDR2Q71H61 639 aa9.75□□□□□ -0.85
XPA-204ENST00000496104 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
XPA-204ENST00000496104 FBXO41Q8TF61 875 aa9.73□□□□□ -0.85
XPA-204ENST00000496104 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
XPA-204ENST00000496104 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
XPA-204ENST00000496104 ZNF579Q8NAF0 562 aaKnown RBP9.71□□□□□ -0.86
XPA-204ENST00000496104 TARBP1Q13395 1621 aaKnown RBP9.71□□□□□ -0.86
XPA-204ENST00000496104 SOCS7O14512 581 aa9.7□□□□□ -0.86
XPA-204ENST00000496104 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
XPA-204ENST00000496104 TOPBP1Q92547 1522 aa9.67□□□□□ -0.86
XPA-204ENST00000496104 ZRANB1Q9UGI0 708 aa9.67□□□□□ -0.86
XPA-204ENST00000496104 GALR2O43603 387 aaPredicted RBP9.65□□□□□ -0.86
XPA-204ENST00000496104 WIZO95785 1651 aa9.62□□□□□ -0.87
XPA-204ENST00000496104 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
XPA-204ENST00000496104 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
XPA-204ENST00000496104 SYNJ1O43426 1573 aa9.61□□□□□ -0.87
XPA-204ENST00000496104 SYNJ2O15056 1496 aa9.6□□□□□ -0.87
XPA-204ENST00000496104 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
XPA-204ENST00000496104 PRDM2Q13029 1718 aa9.59□□□□□ -0.87
XPA-204ENST00000496104 KDM6BO15054 1643 aa9.59□□□□□ -0.87
XPA-204ENST00000496104 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
XPA-204ENST00000496104 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
XPA-204ENST00000496104 ABCC10Q5T3U5 1492 aa9.54□□□□□ -0.88
XPA-204ENST00000496104 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
XPA-204ENST00000496104 PELP1Q8IZL8 1130 aaKnown RBP9.53□□□□□ -0.88
XPA-204ENST00000496104 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
XPA-204ENST00000496104 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
XPA-204ENST00000496104 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
XPA-204ENST00000496104 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
XPA-204ENST00000496104 PHF12Q96QT6 1004 aa9.49□□□□□ -0.89
XPA-204ENST00000496104 DISP3Q9P2K9 1392 aa9.49□□□□□ -0.89
XPA-204ENST00000496104 CEP170Q5SW79 1584 aa9.48□□□□□ -0.89
XPA-204ENST00000496104 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
XPA-204ENST00000496104 MAPKBP1O60336 1514 aa9.46□□□□□ -0.89
XPA-204ENST00000496104 POTEJP0CG39 1038 aa9.46□□□□□ -0.9
XPA-204ENST00000496104 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
XPA-204ENST00000496104 FAM69CQ0P6D2 419 aa9.45□□□□□ -0.9
XPA-204ENST00000496104 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
XPA-204ENST00000496104 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
XPA-204ENST00000496104 ABCC8Q09428 1581 aa9.44□□□□□ -0.9
XPA-204ENST00000496104 PPRC1Q5VV67 1664 aaKnown RBP9.44□□□□□ -0.9
XPA-204ENST00000496104 TSPOAP1O95153 1857 aa9.43□□□□□ -0.9
XPA-204ENST00000496104 WDR97A6NE52 1622 aa9.43□□□□□ -0.9
XPA-204ENST00000496104 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
XPA-204ENST00000496104 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
XPA-204ENST00000496104 SPATA31D1Q6ZQQ2 1576 aa9.42□□□□□ -0.9
XPA-204ENST00000496104 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
XPA-204ENST00000496104 MAMSTRQ6ZN01 415 aa9.41□□□□□ -0.9
XPA-204ENST00000496104 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
XPA-204ENST00000496104 GRIN2BQ13224 1484 aa9.4□□□□□ -0.9
XPA-204ENST00000496104 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
XPA-204ENST00000496104 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
XPA-204ENST00000496104 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
XPA-204ENST00000496104 C7P10643 843 aa9.38□□□□□ -0.91
XPA-204ENST00000496104 NUP160Q12769 1436 aa9.38□□□□□ -0.91
XPA-204ENST00000496104 ADCY10Q96PN6 1610 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms