RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, humanhuman

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-223ENST00000495484 CLIP1P30622 1438 aa14.68□□□□□ -0.06
PCDH15-223ENST00000495484 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
PCDH15-223ENST00000495484 NUP160Q12769 1436 aa14.66□□□□□ -0.06
PCDH15-223ENST00000495484 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
PCDH15-223ENST00000495484 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
PCDH15-223ENST00000495484 IQGAP2Q13576 1575 aa14.6□□□□□ -0.07
PCDH15-223ENST00000495484 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
PCDH15-223ENST00000495484 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
PCDH15-223ENST00000495484 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
PCDH15-223ENST00000495484 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
PCDH15-223ENST00000495484 UGGT2Q9NYU1 1516 aa14.55□□□□□ -0.08
PCDH15-223ENST00000495484 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
PCDH15-223ENST00000495484 CHD1O14646 1710 aa14.55□□□□□ -0.08
PCDH15-223ENST00000495484 P3H3Q8IVL6 736 aa14.52□□□□□ -0.08
PCDH15-223ENST00000495484 CARMIL2Q6F5E8 1435 aa14.52□□□□□ -0.08
PCDH15-223ENST00000495484 VPS8Q8N3P4 1428 aa14.52□□□□□ -0.08
PCDH15-223ENST00000495484 ARAP1Q96P48 1450 aa14.52□□□□□ -0.09
PCDH15-223ENST00000495484 SAMD9Q5K651 1589 aa14.5□□□□□ -0.09
PCDH15-223ENST00000495484 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
PCDH15-223ENST00000495484 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
PCDH15-223ENST00000495484 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
PCDH15-223ENST00000495484 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
PCDH15-223ENST00000495484 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
PCDH15-223ENST00000495484 APLP2Q06481 763 aa14.46□□□□□ -0.1
PCDH15-223ENST00000495484 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
PCDH15-223ENST00000495484 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
PCDH15-223ENST00000495484 CASKIN1Q8WXD9 1431 aa14.4□□□□□ -0.1
PCDH15-223ENST00000495484 PTPRGP23470 1445 aa14.38□□□□□ -0.11
PCDH15-223ENST00000495484 ATP1B4Q9UN42 357 aaPredicted RBP14.38□□□□□ -0.11
PCDH15-223ENST00000495484 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
PCDH15-223ENST00000495484 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
PCDH15-223ENST00000495484 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
PCDH15-223ENST00000495484 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
PCDH15-223ENST00000495484 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
PCDH15-223ENST00000495484 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
PCDH15-223ENST00000495484 HECW1Q76N89 1606 aa14.29□□□□□ -0.12
PCDH15-223ENST00000495484 UACAQ9BZF9 1416 aa14.29□□□□□ -0.12
PCDH15-223ENST00000495484 PLB1Q6P1J6 1458 aa14.28□□□□□ -0.12
PCDH15-223ENST00000495484 CDK11AQ9UQ88 783 aaPredicted RBP14.27□□□□□ -0.12
PCDH15-223ENST00000495484 RAPGEF6Q8TEU7 1601 aa14.27□□□□□ -0.12
PCDH15-223ENST00000495484 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
PCDH15-223ENST00000495484 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
PCDH15-223ENST00000495484 ABCA8O94911 1581 aa14.26□□□□□ -0.13
PCDH15-223ENST00000495484 NUP153P49790 1475 aaKnown RBP14.25□□□□□ -0.13
PCDH15-223ENST00000495484 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
PCDH15-223ENST00000495484 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
PCDH15-223ENST00000495484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
PCDH15-223ENST00000495484 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
PCDH15-223ENST00000495484 UHRF1BP1LA0JNW5 1464 aa14.23□□□□□ -0.13
PCDH15-223ENST00000495484 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
PCDH15-223ENST00000495484 LRRC9Q6ZRR7 1453 aa14.22□□□□□ -0.13
PCDH15-223ENST00000495484 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
PCDH15-223ENST00000495484 ABCC2Q92887 1545 aa14.21□□□□□ -0.14
PCDH15-223ENST00000495484 ARID3CA6NKF2 412 aa14.21□□□□□ -0.14
PCDH15-223ENST00000495484 PLEKHD1A6NEE1 506 aa14.2□□□□□ -0.14
PCDH15-223ENST00000495484 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
PCDH15-223ENST00000495484 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
PCDH15-223ENST00000495484 ATP10BO94823 1461 aa14.19□□□□□ -0.14
PCDH15-223ENST00000495484 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
PCDH15-223ENST00000495484 NPM1P06748 294 aaKnown RBP eCLIP14.16□□□□□ -0.14
PCDH15-223ENST00000495484 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
PCDH15-223ENST00000495484 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
PCDH15-223ENST00000495484 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
PCDH15-223ENST00000495484 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
PCDH15-223ENST00000495484 LRRIQ1Q96JM4 1722 aa14.12□□□□□ -0.15
PCDH15-223ENST00000495484 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
PCDH15-223ENST00000495484 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
PCDH15-223ENST00000495484 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
PCDH15-223ENST00000495484 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
PCDH15-223ENST00000495484 ADCY10Q96PN6 1610 aa14.09□□□□□ -0.15
PCDH15-223ENST00000495484 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
PCDH15-223ENST00000495484 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
PCDH15-223ENST00000495484 SUPT6HQ7KZ85 1726 aaKnown RBP14.07□□□□□ -0.16
PCDH15-223ENST00000495484 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
PCDH15-223ENST00000495484 CCNB3Q8WWL7 1395 aa14.05□□□□□ -0.16
PCDH15-223ENST00000495484 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
PCDH15-223ENST00000495484 ZCCHC11Q5TAX3 1644 aaKnown RBP14.05□□□□□ -0.16
PCDH15-223ENST00000495484 MYOM3Q5VTT5 1437 aa14.04□□□□□ -0.16
PCDH15-223ENST00000495484 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.16
PCDH15-223ENST00000495484 KCNH8Q96L42 1107 aa14.02□□□□□ -0.16
PCDH15-223ENST00000495484 KIF14Q15058 1648 aa14.02□□□□□ -0.16
PCDH15-223ENST00000495484 ASXL2Q76L83 1435 aa14.02□□□□□ -0.17
PCDH15-223ENST00000495484 MIA2Q96PC5 1412 aa14.02□□□□□ -0.17
PCDH15-223ENST00000495484 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
PCDH15-223ENST00000495484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDH15-223ENST00000495484 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
PCDH15-223ENST00000495484 CFDP1Q9UEE9 299 aaPredicted RBP13.99□□□□□ -0.17
PCDH15-223ENST00000495484 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
PCDH15-223ENST00000495484 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
PCDH15-223ENST00000495484 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
PCDH15-223ENST00000495484 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
PCDH15-223ENST00000495484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDH15-223ENST00000495484 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
PCDH15-223ENST00000495484 PLCH2O75038 1416 aa13.92□□□□□ -0.18
PCDH15-223ENST00000495484 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
PCDH15-223ENST00000495484 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
PCDH15-223ENST00000495484 ZNF777Q9ULD5 760 aaPredicted RBP13.91□□□□□ -0.18
PCDH15-223ENST00000495484 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
PCDH15-223ENST00000495484 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
PCDH15-223ENST00000495484 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms