RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
MRPL55-232ENST00000495434 KIAA0586Q9BVV6 1533 aa23.94■■□□□ 1.42
MRPL55-232ENST00000495434 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
MRPL55-232ENST00000495434 RAPGEF2Q9Y4G8 1499 aa23.82■■□□□ 1.4
MRPL55-232ENST00000495434 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
MRPL55-232ENST00000495434 IQGAP2Q13576 1575 aa23.74■■□□□ 1.39
MRPL55-232ENST00000495434 CARMIL2Q6F5E8 1435 aa23.69■■□□□ 1.38
MRPL55-232ENST00000495434 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
MRPL55-232ENST00000495434 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
MRPL55-232ENST00000495434 PTPRGP23470 1445 aa23.63■■□□□ 1.37
MRPL55-232ENST00000495434 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
MRPL55-232ENST00000495434 EEA1Q15075 1411 aa23.62■■□□□ 1.37
MRPL55-232ENST00000495434 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
MRPL55-232ENST00000495434 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
MRPL55-232ENST00000495434 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
MRPL55-232ENST00000495434 DISP1Q96F81 1524 aa23.59■■□□□ 1.37
MRPL55-232ENST00000495434 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
MRPL55-232ENST00000495434 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
MRPL55-232ENST00000495434 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
MRPL55-232ENST00000495434 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
MRPL55-232ENST00000495434 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
MRPL55-232ENST00000495434 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
MRPL55-232ENST00000495434 UACAQ9BZF9 1416 aa23.47■■□□□ 1.35
MRPL55-232ENST00000495434 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
MRPL55-232ENST00000495434 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
MRPL55-232ENST00000495434 ABCC2Q92887 1545 aa23.46■■□□□ 1.35
MRPL55-232ENST00000495434 ABCC10Q5T3U5 1492 aa23.45■■□□□ 1.34
MRPL55-232ENST00000495434 FAM69CQ0P6D2 419 aa23.38■■□□□ 1.33
MRPL55-232ENST00000495434 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
MRPL55-232ENST00000495434 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
MRPL55-232ENST00000495434 KDM5BQ9UGL1 1544 aa23.36■■□□□ 1.33
MRPL55-232ENST00000495434 KIF21BO75037 1637 aa23.35■■□□□ 1.33
MRPL55-232ENST00000495434 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
MRPL55-232ENST00000495434 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
MRPL55-232ENST00000495434 ABCA8O94911 1581 aa23.29■■□□□ 1.32
MRPL55-232ENST00000495434 SAMD9Q5K651 1589 aa23.28■■□□□ 1.32
MRPL55-232ENST00000495434 ZCCHC11Q5TAX3 1644 aaKnown RBP23.27■■□□□ 1.32
MRPL55-232ENST00000495434 GLI2P10070 1586 aa23.24■■□□□ 1.31
MRPL55-232ENST00000495434 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
MRPL55-232ENST00000495434 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
MRPL55-232ENST00000495434 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
MRPL55-232ENST00000495434 TSPOAP1O95153 1857 aa23.16■■□□□ 1.3
MRPL55-232ENST00000495434 EFCAB5A4FU69 1503 aa23.15■■□□□ 1.3
MRPL55-232ENST00000495434 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
MRPL55-232ENST00000495434 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
MRPL55-232ENST00000495434 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
MRPL55-232ENST00000495434 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
MRPL55-232ENST00000495434 ATP10BO94823 1461 aa23.1■■□□□ 1.29
MRPL55-232ENST00000495434 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
MRPL55-232ENST00000495434 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
MRPL55-232ENST00000495434 KDM6BO15054 1643 aa23.07■■□□□ 1.28
MRPL55-232ENST00000495434 TEX14Q8IWB6 1497 aa23.04■■□□□ 1.28
MRPL55-232ENST00000495434 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
MRPL55-232ENST00000495434 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
MRPL55-232ENST00000495434 CFAP43Q8NDM7 1665 aa23.01■■□□□ 1.27
MRPL55-232ENST00000495434 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
MRPL55-232ENST00000495434 ARID3CA6NKF2 412 aa22.99■■□□□ 1.27
MRPL55-232ENST00000495434 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
MRPL55-232ENST00000495434 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
MRPL55-232ENST00000495434 ARHGAP35Q9NRY4 1499 aa22.97■■□□□ 1.27
MRPL55-232ENST00000495434 FMN1Q68DA7 1419 aa22.95■■□□□ 1.26
MRPL55-232ENST00000495434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
MRPL55-232ENST00000495434 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
MRPL55-232ENST00000495434 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
MRPL55-232ENST00000495434 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
MRPL55-232ENST00000495434 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
MRPL55-232ENST00000495434 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
MRPL55-232ENST00000495434 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
MRPL55-232ENST00000495434 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
MRPL55-232ENST00000495434 CDK13Q14004 1512 aaKnown RBP22.79■■□□□ 1.24
MRPL55-232ENST00000495434 ARAP3Q8WWN8 1544 aa22.79■■□□□ 1.24
MRPL55-232ENST00000495434 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
MRPL55-232ENST00000495434 CDK11AQ9UQ88 783 aaPredicted RBP22.76■■□□□ 1.23
MRPL55-232ENST00000495434 NEO1Q92859 1461 aa22.76■■□□□ 1.23
MRPL55-232ENST00000495434 CLIP1P30622 1438 aa22.74■■□□□ 1.23
MRPL55-232ENST00000495434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.74■■□□□ 1.23
MRPL55-232ENST00000495434 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
MRPL55-232ENST00000495434 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
MRPL55-232ENST00000495434 CCDC18Q5T9S5 1454 aa22.68■■□□□ 1.22
MRPL55-232ENST00000495434 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
MRPL55-232ENST00000495434 PCF11O94913 1555 aaKnown RBP22.67■■□□□ 1.22
MRPL55-232ENST00000495434 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
MRPL55-232ENST00000495434 TROQ12816 1431 aaPredicted RBP22.66■■□□□ 1.22
MRPL55-232ENST00000495434 KDM4FA0A1W2PPD8 638 aa22.66■■□□□ 1.22
MRPL55-232ENST00000495434 CFAP74Q9C0B2 1584 aa22.66■■□□□ 1.22
MRPL55-232ENST00000495434 FANCAO15360 1455 aa22.65■■□□□ 1.22
MRPL55-232ENST00000495434 PLCH2O75038 1416 aa22.63■■□□□ 1.21
MRPL55-232ENST00000495434 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
MRPL55-232ENST00000495434 KIF14Q15058 1648 aa22.61■■□□□ 1.21
MRPL55-232ENST00000495434 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
MRPL55-232ENST00000495434 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
MRPL55-232ENST00000495434 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
MRPL55-232ENST00000495434 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
MRPL55-232ENST00000495434 ADGRL1O94910 1474 aa22.57■■□□□ 1.2
MRPL55-232ENST00000495434 FRMPD1Q5SYB0 1578 aa22.57■■□□□ 1.2
MRPL55-232ENST00000495434 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
MRPL55-232ENST00000495434 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
MRPL55-232ENST00000495434 ZMYM4Q5VZL5 1548 aa22.49■■□□□ 1.19
MRPL55-232ENST00000495434 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
MRPL55-232ENST00000495434 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms