RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
APTX-231ENST00000494973 IQGAP2Q13576 1575 aa21.86■■□□□ 1.09
APTX-231ENST00000494973 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
APTX-231ENST00000494973 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
APTX-231ENST00000494973 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
APTX-231ENST00000494973 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
APTX-231ENST00000494973 EFCAB5A4FU69 1503 aa21.76■■□□□ 1.07
APTX-231ENST00000494973 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
APTX-231ENST00000494973 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
APTX-231ENST00000494973 SHROOM2Q13796 1616 aa21.72■■□□□ 1.07
APTX-231ENST00000494973 CLIP1P30622 1438 aa21.7■■□□□ 1.06
APTX-231ENST00000494973 CARMIL2Q6F5E8 1435 aa21.68■■□□□ 1.06
APTX-231ENST00000494973 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
APTX-231ENST00000494973 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
APTX-231ENST00000494973 KIAA0556O60303 1618 aa21.62■■□□□ 1.05
APTX-231ENST00000494973 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
APTX-231ENST00000494973 PRG4Q92954 1404 aaPredicted RBP21.6■■□□□ 1.05
APTX-231ENST00000494973 DISP1Q96F81 1524 aa21.59■■□□□ 1.05
APTX-231ENST00000494973 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
APTX-231ENST00000494973 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
APTX-231ENST00000494973 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
APTX-231ENST00000494973 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
APTX-231ENST00000494973 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
APTX-231ENST00000494973 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
APTX-231ENST00000494973 PTPRGP23470 1445 aa21.44■■□□□ 1.02
APTX-231ENST00000494973 P3H3Q8IVL6 736 aa21.43■■□□□ 1.02
APTX-231ENST00000494973 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
APTX-231ENST00000494973 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.02
APTX-231ENST00000494973 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
APTX-231ENST00000494973 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
APTX-231ENST00000494973 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
APTX-231ENST00000494973 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
APTX-231ENST00000494973 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
APTX-231ENST00000494973 RAPGEF6Q8TEU7 1601 aa21.36■■□□□ 1.01
APTX-231ENST00000494973 PCF11O94913 1555 aaKnown RBP21.35■■□□□ 1.01
APTX-231ENST00000494973 ABCA8O94911 1581 aa21.34■■□□□ 1.01
APTX-231ENST00000494973 UACAQ9BZF9 1416 aa21.33■■□□□ 1.01
APTX-231ENST00000494973 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
APTX-231ENST00000494973 ABCC2Q92887 1545 aa21.3■■□□□ 1
APTX-231ENST00000494973 CCDC18Q5T9S5 1454 aa21.3■■□□□ 1
APTX-231ENST00000494973 PLB1Q6P1J6 1458 aa21.28■■□□□ 1
APTX-231ENST00000494973 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
APTX-231ENST00000494973 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
APTX-231ENST00000494973 APLP2Q06481 763 aa21.26■□□□□ 0.99
APTX-231ENST00000494973 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
APTX-231ENST00000494973 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
APTX-231ENST00000494973 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
APTX-231ENST00000494973 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
APTX-231ENST00000494973 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
APTX-231ENST00000494973 ADCY10Q96PN6 1610 aa21.19■□□□□ 0.98
APTX-231ENST00000494973 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
APTX-231ENST00000494973 KDM5BQ9UGL1 1544 aa21.17■□□□□ 0.98
APTX-231ENST00000494973 CDK11AQ9UQ88 783 aaPredicted RBP21.16■□□□□ 0.98
APTX-231ENST00000494973 LRRIQ1Q96JM4 1722 aa21.13■□□□□ 0.97
APTX-231ENST00000494973 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
APTX-231ENST00000494973 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
APTX-231ENST00000494973 ZCCHC11Q5TAX3 1644 aaKnown RBP21.12■□□□□ 0.97
APTX-231ENST00000494973 ATP10BO94823 1461 aa21.12■□□□□ 0.97
APTX-231ENST00000494973 CDK13Q14004 1512 aaKnown RBP21.11■□□□□ 0.97
APTX-231ENST00000494973 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
APTX-231ENST00000494973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
APTX-231ENST00000494973 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
APTX-231ENST00000494973 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
APTX-231ENST00000494973 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
APTX-231ENST00000494973 PLEKHD1A6NEE1 506 aa21.04■□□□□ 0.96
APTX-231ENST00000494973 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
APTX-231ENST00000494973 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
APTX-231ENST00000494973 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
APTX-231ENST00000494973 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
APTX-231ENST00000494973 WDR7Q9Y4E6 1490 aa21■□□□□ 0.95
APTX-231ENST00000494973 KIF14Q15058 1648 aa20.99■□□□□ 0.95
APTX-231ENST00000494973 ASXL2Q76L83 1435 aa20.96■□□□□ 0.95
APTX-231ENST00000494973 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
APTX-231ENST00000494973 KANK4Q5T7N3 995 aaPredicted RBP20.92■□□□□ 0.94
APTX-231ENST00000494973 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
APTX-231ENST00000494973 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
APTX-231ENST00000494973 ABCA9Q8IUA7 1624 aa20.84■□□□□ 0.93
APTX-231ENST00000494973 GLI2P10070 1586 aa20.84■□□□□ 0.93
APTX-231ENST00000494973 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
APTX-231ENST00000494973 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.93
APTX-231ENST00000494973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.92
APTX-231ENST00000494973 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
APTX-231ENST00000494973 MYO5CQ9NQX4 1742 aa20.81■□□□□ 0.92
APTX-231ENST00000494973 ARAP3Q8WWN8 1544 aa20.8■□□□□ 0.92
APTX-231ENST00000494973 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
APTX-231ENST00000494973 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
APTX-231ENST00000494973 DIP2BQ9P265 1576 aa20.8■□□□□ 0.92
APTX-231ENST00000494973 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
APTX-231ENST00000494973 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
APTX-231ENST00000494973 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
APTX-231ENST00000494973 PHLDB1Q86UU1 1377 aa20.76■□□□□ 0.91
APTX-231ENST00000494973 CDC42BPAQ5VT25 1732 aa20.75■□□□□ 0.91
APTX-231ENST00000494973 GPATCH8Q9UKJ3 1502 aaKnown RBP20.75■□□□□ 0.91
APTX-231ENST00000494973 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
APTX-231ENST00000494973 CFAP74Q9C0B2 1584 aa20.73■□□□□ 0.91
APTX-231ENST00000494973 PLCH2O75038 1416 aa20.73■□□□□ 0.91
APTX-231ENST00000494973 MAP3K4Q9Y6R4 1608 aa20.73■□□□□ 0.91
APTX-231ENST00000494973 RRBP1Q9P2E9 1410 aaKnown RBP20.72■□□□□ 0.91
APTX-231ENST00000494973 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
APTX-231ENST00000494973 ARHGAP5Q13017 1502 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms