RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
USP34-221ENST00000494867 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
USP34-221ENST00000494867 NUP160Q12769 1436 aa19.2■□□□□ 0.66
USP34-221ENST00000494867 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
USP34-221ENST00000494867 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
USP34-221ENST00000494867 EEA1Q15075 1411 aa19.17■□□□□ 0.66
USP34-221ENST00000494867 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
USP34-221ENST00000494867 RIMBP3CA6NJZ7 1639 aa19.13■□□□□ 0.65
USP34-221ENST00000494867 RIMBP3BA6NNM3 1639 aa19.13■□□□□ 0.65
USP34-221ENST00000494867 RIMBP3Q9UFD9 1639 aa19.13■□□□□ 0.65
USP34-221ENST00000494867 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
USP34-221ENST00000494867 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
USP34-221ENST00000494867 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
USP34-221ENST00000494867 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
USP34-221ENST00000494867 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
USP34-221ENST00000494867 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
USP34-221ENST00000494867 CTTNBP2Q8WZ74 1663 aa19.04■□□□□ 0.64
USP34-221ENST00000494867 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
USP34-221ENST00000494867 KIF21BO75037 1637 aa19■□□□□ 0.63
USP34-221ENST00000494867 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
USP34-221ENST00000494867 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
USP34-221ENST00000494867 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
USP34-221ENST00000494867 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
USP34-221ENST00000494867 SLC4A1APQ9BWU0 796 aaKnown RBP18.94■□□□□ 0.62
USP34-221ENST00000494867 MSH5O43196 834 aa18.91■□□□□ 0.62
USP34-221ENST00000494867 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
USP34-221ENST00000494867 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
USP34-221ENST00000494867 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
USP34-221ENST00000494867 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
USP34-221ENST00000494867 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
USP34-221ENST00000494867 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
USP34-221ENST00000494867 DISP1Q96F81 1524 aa18.83■□□□□ 0.6
USP34-221ENST00000494867 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
USP34-221ENST00000494867 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
USP34-221ENST00000494867 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
USP34-221ENST00000494867 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
USP34-221ENST00000494867 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
USP34-221ENST00000494867 SAMD9Q5K651 1589 aa18.75■□□□□ 0.59
USP34-221ENST00000494867 PTPRGP23470 1445 aa18.74■□□□□ 0.59
USP34-221ENST00000494867 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
USP34-221ENST00000494867 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
USP34-221ENST00000494867 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
USP34-221ENST00000494867 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
USP34-221ENST00000494867 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
USP34-221ENST00000494867 UACAQ9BZF9 1416 aa18.64■□□□□ 0.57
USP34-221ENST00000494867 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
USP34-221ENST00000494867 PLB1Q6P1J6 1458 aa18.61■□□□□ 0.57
USP34-221ENST00000494867 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
USP34-221ENST00000494867 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
USP34-221ENST00000494867 ABCA8O94911 1581 aa18.59■□□□□ 0.57
USP34-221ENST00000494867 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
USP34-221ENST00000494867 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
USP34-221ENST00000494867 CLIP1P30622 1438 aa18.56■□□□□ 0.56
USP34-221ENST00000494867 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
USP34-221ENST00000494867 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
USP34-221ENST00000494867 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
USP34-221ENST00000494867 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
USP34-221ENST00000494867 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
USP34-221ENST00000494867 TRHP20396 242 aaPredicted RBP18.5■□□□□ 0.55
USP34-221ENST00000494867 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
USP34-221ENST00000494867 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
USP34-221ENST00000494867 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
USP34-221ENST00000494867 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.54
USP34-221ENST00000494867 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
USP34-221ENST00000494867 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
USP34-221ENST00000494867 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
USP34-221ENST00000494867 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
USP34-221ENST00000494867 ATP10BO94823 1461 aa18.4■□□□□ 0.54
USP34-221ENST00000494867 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
USP34-221ENST00000494867 WDR7Q9Y4E6 1490 aa18.4■□□□□ 0.54
USP34-221ENST00000494867 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
USP34-221ENST00000494867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
USP34-221ENST00000494867 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
USP34-221ENST00000494867 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
USP34-221ENST00000494867 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
USP34-221ENST00000494867 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
USP34-221ENST00000494867 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
USP34-221ENST00000494867 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
USP34-221ENST00000494867 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
USP34-221ENST00000494867 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
USP34-221ENST00000494867 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
USP34-221ENST00000494867 GLI2P10070 1586 aa18.31■□□□□ 0.52
USP34-221ENST00000494867 TSPOAP1O95153 1857 aa18.29■□□□□ 0.52
USP34-221ENST00000494867 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
USP34-221ENST00000494867 KCNH8Q96L42 1107 aa18.27■□□□□ 0.52
USP34-221ENST00000494867 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.51
USP34-221ENST00000494867 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
USP34-221ENST00000494867 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
USP34-221ENST00000494867 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
USP34-221ENST00000494867 ABCA9Q8IUA7 1624 aa18.22■□□□□ 0.51
USP34-221ENST00000494867 PPRC1Q5VV67 1664 aaKnown RBP18.22■□□□□ 0.51
USP34-221ENST00000494867 KIF14Q15058 1648 aa18.21■□□□□ 0.51
USP34-221ENST00000494867 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
USP34-221ENST00000494867 TTC37Q6PGP7 1564 aa18.19■□□□□ 0.5
USP34-221ENST00000494867 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
USP34-221ENST00000494867 MAGI3Q5TCQ9 1506 aa18.18■□□□□ 0.5
USP34-221ENST00000494867 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
USP34-221ENST00000494867 TEX14Q8IWB6 1497 aa18.17■□□□□ 0.5
USP34-221ENST00000494867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.17■□□□□ 0.5
USP34-221ENST00000494867 TIAM1Q13009 1591 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms